arXiv subjects

Amala Akkiraju

Publications and source records attributed to Amala Akkiraju.

5 recordsLinked to original sources

arXiv2026

Polymer-Residue Accessibility Shapes Sequence Dependence of Critical Temperatures for Phase Separation

Biological polymers, such as intrinsically disordered proteins, play a central role in cellular biology, including mediating phase separation and controlling activity of biological condensates. The physical properties and functions of biopolymers are determined by their residue sequence. Recently, significant computational and theoretical efforts have been devoted to characterizing the combinatorially complex sequence dependence of biopolymer phase diagrams. Here, we quantitatively show that monomer accessibility is central to determining the strength of pair interactions. We formulate an analytical perturbative approach, phenomenologically precluding two polymers' centers of mass from overlapping within a correlation hole. This theory yields the correction to the strength of mean-field interactions in terms of a residue-accessibility parameter (RAP), which accounts for the limited availability of inner monomers to interactions. RAP rationalizes the variations in critical temperatures found in extensive Monte Carlo simulations for thousands of two-letter polymer solutions of varying lengths and sequences. RAP may thus be effective for deciphering the polymer-sequence dependence of phase diagrams given any polymer length, set of monomer types, and polymer mixtures.

cond-mat.soft↗

arXiv2024

High-precision chemical quantum sensing in flowing monodisperse microdroplets

We report on a novel flow-based method for high-precision chemical detection that integrates quantum sensing with droplet microfluidics. We deploy nanodiamond particles hosting fluorescent nitrogen vacancy defects as quantum sensors in flowing, monodisperse, picoliter-volume microdroplets containing analyte molecules. ND motion within these microcompartments facilitates close sensor-analyte interaction and mitigates particle heterogeneity. Microdroplet flow rates are rapid (upto 4cm/s) and with minimal drift. Pairing this controlled flow with microwave control of NV electronic spins, we introduce a new noise-suppressed mode of Optically Detected Magnetic Resonance that is sensitive to chemical analytes while resilient against experimental variations, achieving detection of analyte-induced signals at an unprecedented level of a few hundredths of a percent of the ND fluorescence. We demonstrate its application to detecting paramagnetic ions in droplets with simultaneously low limit-of-detection and low analyte volumes, in a manner significantly better than existing technologies. This is combined with exceptional measurement stability over >103s and across hundreds of thousands of droplets, while utilizing minimal sensor volumes and incurring low ND costs (<$0.70 for an hour of operation). Additionally, we demonstrate using these droplets as micro-confinement chambers by co-encapsulating ND quantum sensors with analytes, including single cells. This versatility suggests wide-ranging applications, like single-cell metabolomics and real-time intracellular measurements in bioreactors. Our work paves the way for portable, high-sensitivity, amplification-free, chemical assays with high throughput; introduces a new chemical imaging tool for probing chemical reactions in microenvironments; and establishes the foundation for developing movable, arrayed quantum sensors through droplet microfluidics.

quant-ph↗

arXiv2022

Observation of a critical prethermal discrete time crystal created by two-frequency driving

We report the observation of long-lived Floquet prethermal discrete time crystalline (PDTC) order in a three-dimensional position-disordered lattice of interacting dipolar-coupled 13C nuclei in diamond at room temperature. We demonstrate a novel strategy of "two-frequency" driving, involving an interleaved application of slow and fast drives that simultaneously prethermalize the spins with an emergent quasi-conserved magnetization along the x-axis, while enabling continuous and highly resolved observation of their dynamic evolution when periodically kicked away from x. The PDTC order manifests itself in a robust period doubling response of this drive-induced quasi-conserved spin magnetization interchanging between x and -x; our experiments allow a unique means to study the formation and melting of PDTC order. We obtain movies of the time-crystalline response with a clarity and throughput orders of magnitude greater than previous experiments. Parametric control over the drive frequencies allows us to reach PDTC lifetimes up to 396 Floquet cycles which we measure in a single-shot experiment. Such rapid measurement enables detailed characterization of the entire PDTC phase diagram, rigidity and lifetime, informing on the role of prethermalization towards stabilizing the DTC response. The two-frequency drive approach represents the simplest generalization of DTCs to multi-frequency drives; it expands the toolkit for realizing and investigating long-lived non-equilibrium phases of matter stabilized by emergent quasi-conservation laws.

quant-ph↗

arXiv2021

High-Field Magnetometry with Hyperpolarized Nuclear Spins

Quantum sensors have attracted broad interest in the quest towards sub-micronscale NMR spectroscopy. Such sensors predominantly operate at low magnetic fields. Instead, however, for high resolution spectroscopy, the high-field regime is naturally advantageous because it allows high absolute chemical shift discrimination. Here we propose and demonstrate a high-field spin magnetometer constructed from an ensemble of hyperpolarized ${}^{13}C$ nuclear spins in diamond. The ${}^{13}C$ nuclei are initialized via Nitrogen Vacancy (NV) centers and protected along a transverse Bloch sphere axis for minute-long periods. When exposed to a time-varying (AC) magnetic field, they undergo secondary precessions that carry an imprint of its frequency and amplitude. The method harnesses long rotating frame ${}^{13}C$ sensor lifetimes $T_2^{\prime}{>}$20s, and their ability to be continuously interrogated. For quantum sensing at 7T and a single crystal sample, we demonstrate spectral resolution better than 100 mHz (corresponding to a frequency precision ${<}$1ppm) and single-shot sensitivity better than 70pT. We discuss the advantages of nuclear spin magnetometers over conventional NV center sensors, including deployability in randomly-oriented diamond particles and in optically scattering media. Since our technique employs densely-packed ${}^{13}C$ nuclei as sensors, it demonstrates a new approach for magnetometry in the "coupled-sensor" limit. This work points to interesting opportunities for microscale NMR chemical sensors constructed from hyperpolarized nanodiamonds and suggests applications of dynamic nuclear polarization (DNP) in quantum sensing.

quant-ph↗

arXiv2021

Floquet prethermalization with lifetime exceeding 90s in a bulk hyperpolarized solid

We report the observation of long-lived Floquet prethermal states in a bulk solid composed of dipolar-coupled $^{13}$C nuclei in diamond at room temperature. For precessing nuclear spins prepared in an initial transverse state, we demonstrate pulsed spin-lock Floquet control that prevents their decay over multiple-minute long periods. We observe Floquet prethermal lifetimes $T_2'\approx$90.9s, extended >60,000-fold over the nuclear free induction decay times. The spins themselves are continuously interrogated for $\sim$10min, corresponding to the application of $\approx$5.8M control pulses. The $^{13}$C nuclei are optically hyperpolarized by lattice Nitrogen Vacancy (NV) centers; the combination of hyperpolarization and continuous spin readout yields significant signal-to-noise in the measurements. This allows probing the Floquet thermalization dynamics with unprecedented clarity. We identify four characteristic regimes of the thermalization process, discerning short-time transient processes leading to the prethermal plateau, and long-time system heating towards infinite temperature. This work points to new opportunities possible via Floquet control in networks of dilute, randomly distributed, low-sensitivity nuclei. In particular, the combination of minutes-long prethermal lifetimes and continuous spin interrogation opens avenues for quantum sensors constructed from hyperpolarized Floquet prethermal nuclei.

quant-ph↗