arXiv subjects

Andrea Perna

Publications and source records attributed to Andrea Perna.

6 recordsLinked to original sources

arXiv2020

A growth model driven by curvature reproduces geometric features of arboreal termite nests

We present a simple three-dimensional model to describe the autonomous expansion of a substrate which grows driven by the local mean curvature of its surface. The model aims to reproduce the nest construction process in arboreal Nasutitermes termites, whose cooperation may similarly be mediated by the shape of the structure they are walking on, for example focusing the building activity of termites where local mean curvature is high. We adopt a phase-field model where the nest is described by one continuous scalar field and its growth is governed by a single nonlinear equation with one adjustable parameter d. When d is large enough the equation is linearly unstable and fairly reproduces a growth process where the initial walls expand, branch and merge, while progressively invading all the available space, which is consistent with the intricate structures of real nests. Interestingly, the linear problem associated to our growth equation is analogous to the buckling of a thin elastic plate under symmetric in-plane compression which is also known to produce rich pattern through non linear and secondary instabilities. We validated our model by collecting nests of two species of arboreal Nasutitermes from the field and imaging their structure with a micro-CT scanner. We found a strong resemblance between real and simulated nests, characterised by the emergence of a characteristic length-scale and by the abundance of saddle-shaped surfaces with zero-mean curvature which validates the choice of the driving mechanism of our growth model.

nlin.AO↗

arXiv2018

Weber's law based perception and the stability of animal groups

Group living animals form aggregations and flocks that remain cohesive in spite of internal movements of individuals. This is possible because individual group members repeatedly adjust their position and motion in response to the position and motion of other group members. Here we develop a theoretical approach to address the question, what general features -- if any -- underlie the interaction rules that mediate group stability in animals of all species? We do so by considering how the spatial organisation of a group would change in the complete absence of interactions. Without interactions, a group would disperse in a way that can be easily characterised in terms of Fick's diffusion equations. We can hence address the inverse theoretical problem of finding the individual-level interaction responses that are required to counterbalance diffusion and to preserve group stability. We show that an individual-level response to neighbour densities in the form of Weber's law (a 'universal' law describing the functioning of the sensory systems of animals of all species) results in an 'anti-diffusion' term at the group level. On short time scales, this anti-diffusion restores the initial group configuration in a way which is reminiscent of methods for image deblurring in image processing. We also show that any non-homogeneous, spatial density distribution can be preserved over time if individual movement patterns have the form of a Weber's law response. Weber's law describes the fundamental functioning of perceptual systems. Our study indicates that it is also a necessary -- but not sufficient -- feature of collective interactions in stable animal groups.

q-bio.PE↗

arXiv2015

Network-based model of the growth of termite nests

We present a model for the growth of the transportation network inside nests of the social insect subfamily Termitinae (Isoptera, termitidae). These nests consist of large chambers (nodes) connected by tunnels (edges). The model based on the empirical analysis of the real nest networks combined with pruning (edge removal, either random or weighted by betweenness centrality) and a memory effect (preferential growth from the latest added chambers) successfully predicts emergent nest properties (degree distribution, size of the largest connected component, average path lengths, backbone link ratios, and local graph redundancy). The two pruning alternatives can be associated with different genuses in the subfamily. A sensitivity analysis on the pruning and memory parameters indicates that Termitinae networks favor fast internal transportation over efficient defense strategies against ant predators. Our results provide an example of how complex network organization and efficient network properties can be generated from simple building rules based on local interactions and contribute to our understanding of the mechanisms that come into play for the formation of termite networks and of biological transportation networks in general.

q-bio.PE↗

arXiv2014

A note on the duality between interaction responses and mutual positions in flocking and schooling

Background: Recent research in animal behaviour has contributed to determine how alignment, turning responses, and changes of speed mediate flocking and schooling interactions in different animal species. Here, we address specifically the problem of what interaction responses support different nearest neighbour configurations in terms of mutual position and distance. Results: We find that the different interaction rules observed in different animal species may be a simple consequence of the relative positions that individuals assume when they move together, and of the noise inherent with the movement of animals, or associated with tracking inaccuracy. Conclusions: The anisotropic positioning of individuals with respect to their neighbours, in combination with noise, can explain several aspects of the movement responses observed in real animal groups, and should be considered explicitly in future models of flocking and schooling. By making a distinction between interaction responses involved in maintaining a preferred flock configuration, and interaction responses directed at changing it, we provide a frame to discriminate movement interactions that signal directional conflict from those underlying consensual group motion.

q-bio.QM↗

arXiv2012

Individual rules for trail pattern formation in Argentine ants (Linepithema humile)

We studied the formation of trail patterns by Argentine ants exploring an empty arena. Using a novel imaging and analysis technique we estimated pheromone concentrations at all spatial positions in the experimental arena and at different times. Then we derived the response function of individual ants to pheromone concentrations by looking at correlations between concentrations and changes in speed or direction of the ants. Ants were found to turn in response to local pheromone concentrations, while their speed was largely unaffected by these concentrations. Ants did not integrate pheromone concentrations over time, with the concentration of pheromone in a 1 cm radius in front of the ant determining the turning angle. The response to pheromone was found to follow a Weber's Law, such that the difference between quantities of pheromone on the two sides of the ant divided by their sum determines the magnitude of the turning angle. This proportional response is in apparent contradiction with the well-established non-linear choice function used in the literature to model the results of binary bridge experiments in ant colonies (Deneubourg et al. 1990). However, agent based simulations implementing the Weber's Law response function led to the formation of trails and reproduced results reported in the literature. We show analytically that a sigmoidal response, analogous to that in the classical Deneubourg model for collective decision making, can be derived from the individual Weber-type response to pheromone concentrations that we have established in our experiments when directional noise around the preferred direction of movement of the ants is assumed.

q-bio.OT↗

arXiv2011

Characterisation of spatial network-like patterns from junctions' geometry

We propose a new method for quantitative characterization of spatial network-like patterns with loops, such as surface fracture patterns, leaf vein networks and patterns of urban streets. Such patterns are not well characterized by purely topological estimators: also patterns that both look different and result from different morphogenetic processes can have similar topology. A local geometric cue -the angles formed by the different branches at junctions- can complement topological information and allow to quantify the large scale spatial coherence of the pattern. For patterns that grow over time, such as fracture lines on the surface of ceramics, the rank assigned by our method to each individual segment of the pattern approximates the order of appearance of that segment. We apply the method to various network-like patterns and we find a continuous but sharp dichotomy between two classes of spatial networks: hierarchical and homogeneous. The first class results from a sequential growth process and presents large scale organization, the latter presents local, but not global organization.

nlin.PS↗