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Andrew Lipnicky

Publications and source records attributed to Andrew Lipnicky.

17 recordsLinked to original sources

Automated Assignment and Prediction of Molecules in Astronomical Line Surveys Using Machine-Learning-Based Chemical Embeddings

Modern radio telescopes generate vast amounts of observational data, offering valuable insights into the molecular composition of interstellar sources. Identifying the molecules within these datasets typically involves time-consuming and labor-intensive manual analysis. This paper presents an automated method for assigning molecules in interstellar line surveys. The algorithm operates in two main stages. First, it automatically determines key parameters of the data, including excitation temperature, line width, and source velocity. Next, it assigns the observed spectral peaks by evaluating the spectroscopic match of the molecular candidates along with analyzing their chemical relevance to the interstellar source. The chemical relevance is determined by leveraging machine-learning-based molecular embedding techniques to analyze the regions of chemical space occupied by the observed species. Following the line assignment, this information is then used to generate new molecular candidates that occupy the same regions of chemical space. These newly generated species serve as promising targets for further investigation in the observational data. The algorithm was validated on spectral line surveys of the dark molecular cloud TMC-1 and the star-forming region IRAS 16293-2422B. In both cases, it identified at least 67 molecular species, accounting for over 90 percent of the analyzed line intensity, in 17 minutes or less while maintaining a high level of accuracy.

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Exploring the Limits of Spectral Line Stacking in Spectral Line Data and Application Toward the Detection of Bulk $^{13}$C Enrichment of Aromatics in TMC-1

The formation history of polycyclic aromatic hydrocarbons (PAHs) in the interstellar medium remains a topic of active debate, with proposed mechanisms ranging from high-temperature stellar ejecta processes to low-temperature chemistry within molecular clouds. Recently, the identification of small PAHs in the cold, dark cloud TMC-1 has provided some circumstantial evidence of the latter. If these are formed in situ, their isotopic ratios, particularly $^{12}$C/$^{13}$C, should reflect the local, bulk material of the molecular cloud; in contrast, PAHs formed in the circumstellar envelopes of evolved stars may show enhanced $^{13}$C abundances. The expected radio signals of these $^{13}$C substituted species will be faint, and thus we conducted a detailed proof-of-concept analysis examining whether spectral line stacking and matched filtering techniques can robustly retrieve signal from multiple singly substituted $^{13}$C isotopologues in aggregate. We find that while retrieved signal decreases in the limit of spectral line confusion, false-positive detections are exceedingly improbable at the adopted 5$σ$ matched filter response detection threshold. We then demonstrate the technique on actual observational data of isotopologues of HC$_9$N toward TMC-1. Finally, we show using synthetic data that if laboratory rotational spectra of all singly substituted $^{13}$C isotopologues of cyanonaphthalene and cyanopyrene isomers existed, current observations of TMC-1 would be sensitive enough to discriminate between a local, bulk $^{12}$C/$^{13}$C ratio and one with an enhanced $^{13}$C abundance suggestive of inheritance.

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Detection of the Polycyclic Aromatic Hydrocarbon Phenalene (C$_{13}$H$_{10}$) in the Very Low Luminosity Object (VeLLO) MC27/L1521F

To date, 14 polycyclic aromatic hydrocarbons (PAHs) ranging in size from two to seven (including five- and six-membered) carbon rings have been detected in the starless dense core TMC-1 CP within the Taurus molecular cloud. Their detection raises questions about the distribution of PAHs in the cold interstellar medium (ISM) and their evolution during star formation. Here, we present the first interstellar detection of a three-ring PAH outside of TMC-1 CP. We detect phenalene (C$_{13}$H$_{10}$), a compact, peri-fused PAH, in the dense core MC27/L1521F, a molecular cloud in Taurus containing a very low-luminosity object (VeLLO). We compare the abundances of phenalene in the two sources with respect to the single-ring aromatic benzonitrile, and find that it is enhanced by a factor of four in MC27/L1521F. We discuss the implications for possible formation and destruction pathways in the two sources. These findings further support the widespread abundance of PAHs throughout the cold ISM and are consistent with survival, inheritance, or replenishment during the earliest stages of star formation.

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Morphological Image Similarity Search on the ALMA Science Archive Query Interface Using Deep Unsupervised Contrastive Representation Learning

With the exponential growth of astronomical data over time, finding the needles in the haystack is becoming increasingly difficult. The next frontier for science archives is to enable searches not only on observational metadata, but also on the content of the observations themselves. As a step in this direction, we have implemented morphological image similarity search into the ALMA Science Archive (ASA). To achieve this we use self-supervised contrastive affine-transformation-independent representation learning of source morphologies with a deep neural network. For a given image on the ASA web interface, astronomers are presented with a summary view of the morphologically most similar images. Each time an astronomer selects an additional image from that view, the display is instantly updated to show the images most similar to the combination of the selected images. Each selection thus refines the similarity display according to the scientific needs of the astronomer. This is the first time image similarity search has been offered in an astronomical science archive.

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The Molecular Inventory of TMC-1 with GOTHAM Observations

Spectral line surveys of the Taurus Molecular Cloud-1 (TMC-1) have led to the detection of more than 100 new molecular species, making it the most prolific source of interstellar molecular discoveries. These wide-band, high-sensitivity line surveys have been enabled by advances in telescope and receiver technology, particularly at centimeter and millimeter wavelengths. In this work, we present a statistical analysis of the molecular inventory of TMC-1 as probed by the GOTHAM large program survey from 3.9 to 36.4 GHz. To fully unlock the potential of the $\sim$29 GHz spectral bandwidth, we developed an automated pipeline for data reduction and calibration. We applied a Bayesian approach with Markov-Chain Monte Carlo fitting to the calibrated spectra and constrained column densities for 102 molecular species detected in TMC-1, including 75 main isotopic species, 20 carbon-13 substituted species, and seven deuterium-substituted species. This list of the detected gas-phase molecules is populated by unsaturated hydrocarbons, in stark contrast to the oxygen-rich organics found in sublimated ices around protostars. Of note, ten individual aromatic molecules were identified in the GOTHAM observations, contributing 0.011% of the gas-phase carbon budget probed by detected molecules when including CO and 6% when excluding CO. This work provides a reference set of observed gas-phase molecular abundances for interstellar clouds, offering a new benchmark for astrochemical theoretical models.

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Discovery of the 7-ring PAH Cyanocoronene (C$_{24}$H$_{11}$CN) in GOTHAM Observations of TMC-1

We present the synthesis and laboratory rotational spectroscopy of the 7-ring polycyclic aromatic hydrocarbon (PAH) cyanocoronene (C$_{24}$H$_{11}$CN) using a laser-ablation assisted cavity-enhanced Fourier transform microwave spectrometer. A total of 71 transitions were measured and assigned between 6.8--10.6\,GHz. Using these assignments, we searched for emission from cyanocoronene in the GBT Observations of TMC-1: Hunting Aromatic Molecules (GOTHAM) project observations of the cold dark molecular cloud TMC-1 using the 100\,m Green Bank Telescope (GBT). We detect a number of individually resolved transitions in ultrasensitive X-band observations and perform a Markov Chain Monte Carlo analysis to derive best-fit parameters, including a total column density of $N(\mathrm{C}_{24}\mathrm{H}_{11}\mathrm{CN}) = 2.69^{+0.26}_{-0.23} \times 10^{12}\,\mathrm{cm}^{-2}$ at a temperature of $6.05^{+0.38}_{-0.37}\,$K. A spectral stacking and matched filtering analysis provides a robust 17.3$\,σ$ significance to the overall detection. The derived column density is comparable to that of cyano-substituted naphthalene, acenaphthylene, and pyrene, defying the trend of decreasing abundance with increasing molecular size and complexity found for carbon chains. We discuss the implications of the detection for our understanding of interstellar PAH chemistry and highlight major open questions and next steps.

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The Missing Link of Sulfur Chemistry in TMC-1: The Detection of c-C3H2S from the GOTHAM Survey

We present the spectroscopic characterization of cyclopropenethione (c-C3H2S) in the laboratory and detect it in space using the Green Bank Telescope (GBT) Observations of TMC-1: Hunting Aromatic Molecules (GOTHAM) survey. The detection of this molecule - the missing link in understanding the C3H2S isomeric family in TMC-1 - completes the detection of all 3 low-energy isomers of C3H2S as both CH2CCS and HCCCHS have been previously detected in this source. The total column density of this molecule (N_T of 5.72+2.65/-1.61x10^10 cm^-2 at an excitation temperature of 4.7+1.3/-1.1 K) is smaller than both CH2CCS and HCCCHS and follows nicely the relative dipole principle (RDP), a kinetic rule-of-thumb for predicting isomer abundances which suggests that, all other chemistry among a family of isomers being the same, the member with the smallest dipole should be the most abundant. The RDP now holds for the astronomical abundance ratios of both the S-bearing and O-bearing counterparts observed in TMC-1; however, CH2CCO continues to elude detection in any astronomical source.

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Discovery of interstellar 1-cyanopyrene: a four-ring polycyclic aromatic hydrocarbon in TMC-1

Polycyclic aromatic hydrocarbons (PAHs) are expected to be the most abundant class of organic molecules in space. Their interstellar lifecycle is not well understood, and progress is hampered by difficulties detecting individual PAH molecules. Here, we present the discovery of CN-functionalized pyrene, a 4-ring PAH, in the dense cloud TMC-1 using the 100-m Green Bank Telescope. We derive an abundance of 1-cyanopyrene of ~1.52 x $10^{12}$ cm$^{-2}$, and from this estimate that the un-substituted pyrene accounts for up to ~0.03-0.3% of the carbon budget in the dense interstellar medium which trace the birth sites of stars and planets. The presence of pyrene in this cold (~10 K) molecular cloud agrees with its recent measurement in asteroid Ryugu where isotopic clumping suggest a cold, interstellar origin. The direct link to the birth site of our solar system is strengthened when we consider the solid state pyrene content in the pre-stellar materials compared to comets, which represent the most pristine material in the solar system. We estimate that solid state pyrene can account for 1% of the carbon within comets carried by this one single organic molecule. The abundance indicates pyrene is an "island of stability" in interstellar PAH chemistry and suggests a potential cold molecular cloud origin of the carbon carried by PAHs that is supplied to forming planetary systems, including habitable worlds such as our own.

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Detections of interstellar 2-cyanopyrene and 4-cyanopyrene in TMC-1

Polycyclic aromatic hydrocarbons (PAHs) are among the most ubiquitous compounds in the universe, accounting for up to ~25% of all interstellar carbon. Since most unsubstituted PAHs do not possess permanent dipole moments, they are invisible to radio astronomy. Constraining their abundances relies on the detection of polar chemical proxies, such as aromatic nitriles. We report the detection of 2- and 4-cyanopyrene, isomers of the recently detected 1-cyanopyrene. We find that these isomers are present in an abundance ratio of ~2:1:2, which mirrors the number of equivalent sites available for CN addition. We conclude that there is evidence that the cyanopyrene isomers formed by direct CN addition to pyrene under kinetic control in hydrogen-rich gas at 10 K and discuss constraints on the H/CN ratio for PAHs in TMC-1.

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High Spectral Resolution Observations of Propynal (HCCCHO) towards TMC-1 from the GOTHAM Large Program on the Green Bank Telescope

We used new high spectral resolution observations of propynal (HCCCHO) towards TMC-1 and in the laboratory to update the spectral line catalog available for transitions of HCCCHO - specifically at frequencies lower than 30 GHz which were previously discrepant in a publicly available catalog. The observed astronomical frequencies provided high enough spectral resolution that, when combined with high-resolution (~2 kHz) measurements taken in the laboratory, a new, consistent fit to both the laboratory and astronomical data was achieved. Now with a nearly exact (<1 kHz) frequency match to the J=2-1 and 3-2 transitions in the astronomical data, using a Markov chain Monte Carlo (MCMC) analysis, a best fit to the total HCCCHO column density of 7.28+4.08/-1.94 x 10^12 cm^-2 was found with a surprisingly low excitation temperature of just over 3 K. This column density is around a factor of 5 times larger than reported in previous studies. Finally, this work highlights that care is needed when using publicly available spectral catalogs to characterize astronomical spectra. The availability of these catalogs is essential to the success of modern astronomical facilities and will only become more important as the next generation of facilities come online.

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Rotational Spectrum and First Interstellar Detection of 2-Methoxyethanol Using ALMA Observations of NGC 6334I

We use both chirped-pulse Fourier transform and frequency modulated absorption spectroscopy to study the rotational spectrum of 2-methoxyethanol in several frequency regions ranging from 8.7-500 GHz. The resulting rotational parameters permitted a search for this molecule in Atacama Large Millimeter/submillimeter Array (ALMA) observations toward the massive protocluster NGC 6334I as well as source B of the low-mass protostellar system IRAS 16293-2422. 25 rotational transitions are observed in the ALMA Band 4 data toward NGC 6334I, resulting in the first interstellar detection of 2-methoxyethanol. A column density of $1.3_{-0.9}^{+1.4} \times 10^{17}$ cm$^{-2}$ is derived at an excitation temperature of $143_{-39}^{+31}$ K. However, molecular signal is not observed in the Band 7 data toward IRAS 16293-2422B and an upper limit column density of $2.5 \times 10^{15}$ cm$^{-2}$ is determined. Various possible formation pathways--including radical recombination and insertion reactions--are discussed. We also investigate physical differences between the two interstellar sources that could result in the observed abundance variations.

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The ALMA Interferometric Pipeline Heuristics

We describe the calibration and imaging heuristics developed and deployed in the ALMA interferometric data processing pipeline, as of ALMA Cycle 9. The pipeline software framework is written in Python, with each data reduction stage layered on top of tasks and toolkit functions provided by the Common Astronomy Software Applications package. This framework supports a variety of tasks for observatory operations, including science data quality assurance, observing mode commissioning, and user reprocessing. It supports ALMA and VLA interferometric data along with ALMA and NRO45m single dish data, via different stages and heuristics. In addition to producing calibration tables, calibrated measurement sets, and cleaned images, the pipeline creates a WebLog which serves as the primary interface for verifying the data quality assurance by the observatory and for examining the contents of the data by the user. Following the adoption of the pipeline by ALMA Operations in 2014, the heuristics have been refined through annual development cycles, culminating in a new pipeline release aligned with the start of each ALMA Cycle of observations. Initial development focused on basic calibration and flagging heuristics (Cycles 2-3), followed by imaging heuristics (Cycles 4-5), refinement of the flagging and imaging heuristics with parallel processing (Cycles 6-7), addition of the moment difference analysis to improve continuum channel identification (2020 release), addition of a spectral renormalization stage (Cycle 8), and improvement in low SNR calibration heuristics (Cycle 9). In the two most recent Cycles, 97% of ALMA datasets were calibrated and imaged with the pipeline, ensuring long-term automated reproducibility. We conclude with a brief description of plans for future additions, including self-calibration, multi-configuration imaging, and calibration and imaging of full polarization data.

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The ALMA Science Archive Reaches a Major Milestone

Science archives are cornerstones of modern astronomical facilities. In this paper we describe the version 1.0 milestone of the Atacama Large Millimeter/submillimeter Array Science Archive. This version features a comprehensive query interface with rich metadata and visualisation of the spatial and spectral locations of the observations, a complete set of virtual observatory services for programmatic access, text-based similarity search, display and query for types of astronomical objects in SIMBAD and NED, browser-based remote visualisation, interactive previews with tentative line identification and extensive documentation including video and Jupyter Notebook tutorials. The development is regularly evaluated by means of user surveys and is entirely focused on providing the best possible user experience with the goal of helping to maximise the scientific productivity of the observatory.

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Relating the HI Gas Structure of Spiral Disks to Passing Satellites

We extend the work of Chang & Chakrabarti (2011) to find simple scaling relations between the density response of the gas disk of a spiral galaxy and the pericenter distance and mass ratio of a perturbing satellite. From the analysis of results from a test particle code, we obtained a simple scaling relation for the density response due to a single satellite interacting with a galactic disk, over a wide range of satellite masses and pericenter distances. We have also explored the effects of multiple satellites on the galactic disk, focusing on cases that are commonly found in cosmological simulations. Here, we use orbits for the satellites that are drawn from cosmological simulations. For these cases, we compare our approximate scaling relations to the density response generated by satellites, and find that for two satellite interactions, our scaling relations approximately recover the response of the galactic disk. We have also examined the observed HI data in the outskirts of several spiral galaxies from the THINGS sample and compared the observed perturbations to that of cosmological simulations and our own scaling relations. While small perturbations can be excited by satellites drawn from cosmological simulations, we find that large perturbations (such as those that are seen in some THINGS galaxies like M51) are not recovered by satellites drawn from cosmological simulations that are similar to Milky Way galaxies.

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The First Detection of Neutral Hydrogen in Emission in a Strong Spiral Lens

We report HI observations of eight spiral galaxies that are strongly lensing background sources. Our targets were selected from the Sloan WFC (Wide Field Camera) Edge-on Late-type Lens Survey (SWELLS) using the Arecibo, Karl G. Jansky Very Large Array, and Green Bank telescopes. We securely detect J1703+2451 at z=0.063 with a signal-to-noise of 6.7 and W50=79+/-13 km/s, obtaining the first detection of HI emission in a strong spiral lens. We measure a mass of M(HI)= 1.77+/-0.06(+0.35/-0.75) x 10^9 M_(sol) for this source. We find that this lens is a normal spiral, with observable properties that are fairly typical of spiral galaxies. For three other sources we did not secure a detection; however, we are able to place strong constraints on the HI masses of those galaxies. The observations for four of our sources were rendered unusable due to strong radio frequency interference.

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Is the vast polar structure of dwarf galaxies a serious problem for lambda cold dark matter?

The dwarf galaxies around the Milky Way are distributed in a so-called vast polar structure (VPOS) that may be in conflict with Lambda CDM simulations. Here, we seek to determine if the VPOS poses a serious challenge to the Lambda cold dark matter paradigm on galactic scales. Specifically, we investigate if the VPOS remains coherent as a function of time. Using the measured Hubble Space Telescope (HST) proper motions and associated uncertainties, we integrate the orbits of the classical Milky Way satellites backwards in time and find that the structure disperses well before a dynamical time. We also examine in particular Leo I and Leo II using their most recent proper motion data, both of which have extreme kinematic properties, but these satellites do not appear to drive the polar fit that is seen at the present day. We have studied the effect of the uncertainties on the HST proper motions on the coherence of the VPOS as a function of time. We find that 8 of the 11 classical dwarfs have reliable proper motions; for these 8, the VPOS also loses significance in less than a dynamical time, indicating that the VPOS is not a dynamically stable structure. Obtaining more accurate proper motion measurements of Ursa Minor, Sculptor, and Carina would bolster these conclusions.

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Galactoseismology: Discovery of a cluster of receding, variable halo stars

A dynamical characterization of dark matter dominated dwarf galaxies from their observed effects on galactic disks (i.e. Galactoseismology) has remained an elusive goal. Here, we present preliminary results from spectroscopic observations of three clustered Cepheid candidates identified from $K$-band light curves towards Norma. The average heliocentric radial velocity of these stars is $\sim$ 156 km/s, which is large and distinct from that of the Galaxy's stellar disk. These objects at $l \sim 333 ^\circ$ and $b \sim -1 ^\circ$ are therefore halo stars; using the $3.6~\micron$ period-luminosity relation of Type I Cepheids, they are at $\sim$ 73 kpc. Our ongoing $I$-band photometry indicates variability on the same time scale as the period determined from the $K_{s}$-band light curve. Distances determined from the $K$-band period-luminosity relation and the 3.6 $\micron$ period-luminosity relation are comparable. The observed radial velocity of these stars agrees roughly with predictions from dynamical models. If these stars are indeed members of the predicted dwarf galaxy that perturbed the outer HI disk of the Milky Way, this would mark the first application of Galactoseismology.

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