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Andrey Sakhovskiy

Publications and source records attributed to Andrey Sakhovskiy.

8 recordsLinked to original sources

Tactile-JEPA: Topology-Aware Self-Supervised Representation Learning for Distributed Tactile Sensors

Tactile sensing is an essential modality for robots performing contact-rich, dexterous manipulation, particularly under visual occlusion. While pre-trained image encoders are standard in robot learning pipelines, tactile encoders are still commonly trained from scratch from raw, noisy signals, which might limit their expressivity. Existing self-supervised learning (SSL) approaches focus predominantly on vision-based tactile sensors, leaving distributed electronic skins largely unaddressed. These sensors, however, have a distinctive property: their sensing elements are sparse and irregularly arranged over the surface they cover, which makes direct reuse of visual SSL methods suboptimal. We present Tactile-JEPA, an efficient self-supervised pre-training method that uses the spatial arrangement of tactile sensors to learn topology-aware representations. Specifically, it is trained to predict the embeddings of masked sensing elements from the unmasked remainder, using the sensor connectivity graph to guide spatial masking. Our analysis shows that effective tactile representations require capturing both local contact details and the global state of the tactile surface, which we achieve through dual-scale masking. Across three diverse datasets spanning magnetic and piezoresistive sensors, different robot embodiments, and single- and paired-sensor configurations, Tactile-JEPA reduces force estimation error by 6.3% and in-hand orientation error by 20.8% over the prior state-of-the-art, with consistent gains in other downstream applications, including policy learning. Overall, our results demonstrate that the benefit of tactile sensing depends critically on the quality of encoder pre-training, a problem which Tactile-JEPA addresses directly. Code is available at https://github.com/E-Kovtun/tactile.

cs.RO↗

LLM Agents Factory: Retrieval of Domain-Specific LLM Agents

Large language model (LLM) agents improve task performance by decomposing problems into role-specialized behaviors. However, their practical deployment is often limited by the computational cost and instability associated with the on-the-fly agent design for each user request. To address this, we present LLM Agents Factory, a retrieval-based framework that constructs domain-specific and Wikipedia-grounded agents on demand using a base of over 20K predetermined agent profiles. Our framework supports two modes: (1) agent profile retrieval via semantic search and (2) distillation into a compact model fine-tuned for direct agent generation. Experiments on MMLU, BIG-bench, and BIG-bench Hard in a single-agent scenario demonstrate that our retrieval-based agent construction surpasses non-agent baselines in accuracy while matching AutoGen generation quality with a 120B backbone at a substantially lower inference cost. Our work reveals that retrieval from a structured agent repository provides a cost-efficient, accurate, and controllable alternative to dynamic agent generation, responding to the strict demands of industrial applications. We provide the implementation code and the agent base in https://huggingface.co/frontier-ai/llm-agent-factory.

cs.CL↗

The Chronicles of RiDiC: Generating Datasets with Controlled Popularity Distribution for Long-form Factuality Evaluation

We present a configurable pipeline for generating multilingual sets of entities with specified characteristics, such as domain, geographical location and popularity, using data from Wikipedia and Wikidata. These datasets are intended for evaluating the factuality of LLMs' long-form generation, thereby complementing evaluation based on short-form QA datasets. We present the RiDiC dataset as an example of this approach. RiDiC contains 3,000 entities from three domains -- rivers, natural disasters, and car models -- spanning different popularity tiers. Each entity is accompanied by its geographical location, English and Chinese names (if available) and relevant English and Chinese Wikipedia content, which is used to evaluate LLMs' responses. Generations about RiDiC entities were obtained from three LLMs in English and Chinese. These were then evaluated using a third-party factuality checker, which showed that entities from our dataset caused even frontier models to hallucinate. To facilitate the evaluation of LLMs' long-form factuality in multiple languages, the code, data, and generation/evaluation scripts have been released.

cs.CL↗

RuCCoD: Towards Automated ICD Coding in Russian

This study investigates the feasibility of automating clinical coding in Russian, a language with limited biomedical resources. We present a new dataset for ICD coding, which includes diagnosis fields from electronic health records (EHRs) annotated with over 10,000 entities and more than 1,500 unique ICD codes. This dataset serves as a benchmark for several state-of-the-art models, including BERT, LLaMA with LoRA, and RAG, with additional experiments examining transfer learning across domains (from PubMed abstracts to medical diagnosis) and terminologies (from UMLS concepts to ICD codes). We then apply the best-performing model to label an in-house EHR dataset containing patient histories from 2017 to 2021. Our experiments, conducted on a carefully curated test set, demonstrate that training with the automated predicted codes leads to a significant improvement in accuracy compared to manually annotated data from physicians. We believe our findings offer valuable insights into the potential for automating clinical coding in resource-limited languages like Russian, which could enhance clinical efficiency and data accuracy in these contexts. Our code and dataset are available at https://github.com/auto-icd-coding/ruccod.

cs.CL↗

BALI: Enhancing Biomedical Language Representations through Knowledge Graph and Language Model Alignment

In recent years, there has been substantial progress in using pretrained Language Models (LMs) on a range of tasks aimed at improving the understanding of biomedical texts. Nonetheless, existing biomedical LLMs show limited comprehension of complex, domain-specific concept structures and the factual information encoded in biomedical Knowledge Graphs (KGs). In this work, we propose BALI (Biomedical Knowledge Graph and Language Model Alignment), a novel joint LM and KG pre-training method that augments an LM with external knowledge by the simultaneous learning of a dedicated KG encoder and aligning the representations of both the LM and the graph. For a given textual sequence, we link biomedical concept mentions to the Unified Medical Language System (UMLS) KG and utilize local KG subgraphs as cross-modal positive samples for these mentions. Our empirical findings indicate that implementing our method on several leading biomedical LMs, such as PubMedBERT and BioLinkBERT, improves their performance on a range of language understanding tasks and the quality of entity representations, even with minimal pre-training on a small alignment dataset sourced from PubMed scientific abstracts.

cs.CL↗

Overview of BioASQ 2025: The Thirteenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering

This is an overview of the thirteenth edition of the BioASQ challenge in the context of the Conference and Labs of the Evaluation Forum (CLEF) 2025. BioASQ is a series of international challenges promoting advances in large-scale biomedical semantic indexing and question answering. This year, BioASQ consisted of new editions of the two established tasks, b and Synergy, and four new tasks: a) Task MultiClinSum on multilingual clinical summarization. b) Task BioNNE-L on nested named entity linking in Russian and English. c) Task ELCardioCC on clinical coding in cardiology. d) Task GutBrainIE on gut-brain interplay information extraction. In this edition of BioASQ, 83 competing teams participated with more than 1000 distinct submissions in total for the six different shared tasks of the challenge. Similar to previous editions, several participating systems achieved competitive performance, indicating the continuous advancement of the state-of-the-art in the field.

cs.CL↗

Multimodal Model with Text and Drug Embeddings for Adverse Drug Reaction Classification

In this paper, we focus on the classification of tweets as sources of potential signals for adverse drug effects (ADEs) or drug reactions (ADRs). Following the intuition that text and drug structure representations are complementary, we introduce a multimodal model with two components. These components are state-of-the-art BERT-based models for language understanding and molecular property prediction. Experiments were carried out on multilingual benchmarks of the Social Media Mining for Health Research and Applications (#SMM4H) initiative. Our models obtained state-of-the-art results of 0.61 F1 and 0.57 F1 on #SMM4H 2021 Shared Tasks 1a and 2 in English and Russian, respectively. On the classification of French tweets from SMM4H 2020 Task 1, our approach pushes the state of the art by an absolute gain of 8% F1. Our experiments show that the molecular information obtained from neural networks is more beneficial for ADE classification than traditional molecular descriptors. The source code for our models is freely available at https://github.com/Andoree/smm4h_2021_classification.

q-bio.QM↗

The Russian Drug Reaction Corpus and Neural Models for Drug Reactions and Effectiveness Detection in User Reviews

The Russian Drug Reaction Corpus (RuDReC) is a new partially annotated corpus of consumer reviews in Russian about pharmaceutical products for the detection of health-related named entities and the effectiveness of pharmaceutical products. The corpus itself consists of two parts, the raw one and the labelled one. The raw part includes 1.4 million health-related user-generated texts collected from various Internet sources, including social media. The labelled part contains 500 consumer reviews about drug therapy with drug- and disease-related information. Labels for sentences include health-related issues or their absence. The sentences with one are additionally labelled at the expression level for identification of fine-grained subtypes such as drug classes and drug forms, drug indications, and drug reactions. Further, we present a baseline model for named entity recognition (NER) and multi-label sentence classification tasks on this corpus. The macro F1 score of 74.85% in the NER task was achieved by our RuDR-BERT model. For the sentence classification task, our model achieves the macro F1 score of 68.82% gaining 7.47% over the score of BERT model trained on Russian data. We make the RuDReC corpus and pretrained weights of domain-specific BERT models freely available at https://github.com/cimm-kzn/RuDReC

cs.CL↗