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Andy T. S. Wan

Publications and source records attributed to Andy T. S. Wan.

12 recordsLinked to original sources

Improving sampling efficacy on high dimensional distributions with thin high density regions using Conservative Hamiltonian Monte Carlo

Hamiltonian Monte Carlo is a prominent Markov Chain Monte Carlo algorithm, which employs symplectic integrators to sample from high dimensional target distributions in many applications, such as statistical mechanics, Bayesian statistics and generative models. However, such distributions tend to have thin high density regions, posing a significant challenge for symplectic integrators to maintain the small energy errors needed for a high acceptance probability. Instead, we propose a variant called Conservative Hamiltonian Monte Carlo, using $R$--reversible energy-preserving integrators to retain a high acceptance probability. We show our algorithm can achieve approximate stationarity with an error determined by the Jacobian approximation of the energy-preserving proposal map. Numerical evidence shows improved convergence and robustness over integration parameters on target distributions with thin high density regions and in high dimensions. Moreover, a version of our algorithm can also be applied to target distributions without gradient information.

math.NA↗

Fully discrete energy-dissipative and conservative discrete gradient particle methods for a class of continuity equations

Structure-preserving particle methods have recently been proposed for a class of nonlinear continuity equations, including aggregation-diffusion equation in [J. Carrillo, K. Craig, F. Patacchini, Calc. Var., 58 (2019), pp. 53] and the Landau equation in [J. Carrillo, J. Hu., L. Wang, J. Wu, J. Comput. Phys. X, 7 (2020), pp. 100066]. One common feature to these equations is that they both admit some variational formulation, which upon proper regularization, leads to particle approximations dissipating the energy and conserving some quantities simultaneously at the semi-discrete level. In this paper, we formulate continuity equations with a density dependent bilinear form associated with the variational derivative of the energy functional and prove that appropriate particle methods satisfy a compatibility condition with its regularized energy. This enables us to utilize discrete gradient time integrators and show that the energy can be dissipated and the mass conserved simultaneously at the fully discrete level. In the case of the Landau equation, we prove that our approach also conserves the momentum and kinetic energy at the fully discrete level. Several numerical examples are presented to demonstrate the dissipative and conservative properties of our proposed method.

math.NA↗

Minimal $\ell^2$ Norm Discrete Multiplier Method

We introduce an extension to the Discrete Multiplier Method (DMM), called Minimal $\ell_2$ Norm Discrete Multiplier Method (MN-DMM), where conservative finite difference schemes for dynamical systems with multiple conserved quantities are constructed procedurally, instead of analytically as in the original DMM. For large dynamical systems with multiple conserved quantities, MN-DMM alleviates difficulties that can arise with the original DMM at constructing conservative schemes which satisfies the discrete multiplier conditions. In particular, MN-DMM utilizes the right Moore-Penrose pseudoinverse of the discrete multiplier matrix to solve an underdetermined least-square problem associated with the discrete multiplier conditions. We prove consistency and conservative properties of the MN-DMM schemes. We also introduce two variants - Mixed MN-DMM and MN-DMM using Singular Value Decomposition - and discuss their usage in practice. Moreover, numerical examples on various problems arising from the mathematical sciences are shown to demonstrate the wide applicability of MN-DMM and its relative ease of implementation compared to the original DMM.

math.NA↗

Conservative Integrators for Piecewise Smooth Systems with Transversal Dynamics

We introduce conservative integrators for long term integration of piecewise smooth systems with transversal dynamics and piecewise smooth conserved quantities. In essence, for a piecewise dynamical system with piecewise defined conserved quantities such that its trajectories cross transversally to its interface, we combine Mannshardt's transition scheme and the Discrete Multiplier Method to obtain conservative integrators capable of preserving conserved quantities up to machine precision and accuracy order. We prove that the order of accuracy of the conservative integrators is preserved after crossing the interface in the case of codimension one number of conserved quantities. Numerical examples illustrate the preservation of accuracy order and conserved quantities across the interface.

math.NA↗

Comparing regional and provincial-wide COVID-19 models with physical distancing in British Columbia

We study the effects of physical distancing measures for the spread of COVID-19 in regional areas within British Columbia, using the reported cases of the five provincial Health Authorities. Building on the Bayesian epidemiological model of Anderson et al. (2020), we propose a hierarchical regional Bayesian model with time-varying regional parameters between March to December of 2020. In the absence of COVID-19 variants and vaccinations during this period, we examine the regionalized basic reproduction number, modelled prevalence, relative reduction in contact due to physical distancing, and proportion of anticipated cases that have been tested and reported. We observe significant differences between the regional and provincial-wide models and demonstrate the hierarchical regional model can better estimate regional prevalence, especially in rural regions. These results indicate that it can be useful to apply similar regional models to other parts of Canada or other countries.

stat.AP↗

Conservative Integrators for Vortex Blob Methods

Conservative symmetric second-order one-step integrators are derived using the Discrete Multiplier Method for a family of vortex-blob models approximating the incompressible Euler's equations on the plane. Conservative properties and second order convergence are proved. A rational function approximation was used to approximate the exponential integral that appears in the Hamiltonian. Numerical experiments are shown to verify the conservative property of these integrators, their second-order accuracy, and as well as the resulting spatial and temporal accuracy of the vortex blob method. Moreover, the derived implicit conservative integrators are shown to be better at preserving conserved quantities than standard higher-order explicit integrators on comparable computation times.

math.NA↗

Conservative Integrators for Many-body Problems

Conservative symmetric second-order one-step schemes are derived for dynamical systems describing various many-body systems using the Discrete Multiplier Method. This includes conservative schemes for the $n$-species Lotka-Volterra system, the $n$-body problem with radially symmetric potential and the $n$-point vortex models in the plane and on the sphere. In particular, we recover Greenspan-Labudde's conservative schemes for the $n$-body problem. Numerical experiments are shown verifying the conservative property of the schemes and second-order accuracy.

math.NA↗

A Posteriori Error Estimation for the p-curl Problem

We derive a posteriori error estimates for a semi-discrete finite element approximation of a nonlinear eddy current problem arising from applied superconductivity, known as the $p$-curl problem. In particular, we show the reliability for non-conforming Nédélec elements based on a residual type argument and a Helmholtz-Weyl decomposition of $W^p_0(\text{curl};Ω)$. As a consequence, we are also able to derive an a posteriori error estimate for a quantity of interest called the AC loss. The nonlinearity for this form of Maxwell's equation is an analogue of the one found in the $p$-Laplacian. It is handled without linearizing around the approximate solution. The non-conformity is dealt by adapting error decomposition techniques of Carstensen, Hu and Orlando. Geometric non-conformities also appear because the continuous problem is defined over a bounded $C^{1,1}$ domain while the discrete problem is formulated over a weaker polyhedral domain. The semi-discrete formulation studied in this paper is often encountered in commercial codes and is shown to be well-posed. The paper concludes with numerical results confirming the reliability of the a posteriori error estimate.

math.NA↗

On the arbitrarily long-term stability of conservative methods

We show the arbitrarily long-term stability of conservative methods for autonomous ODEs. Given a system of autonomous ODEs with conserved quantities, if the preimage of the conserved quantities possesses a bounded locally nite neighborhood, then the global error of any conservative method with the uniformly bounded displacement property is bounded for all time, when the uniform time step is taken suciently small. On nite precision machines, the global error still remains bounded and independent of time until some arbitrarily large time determined by machine precision and tolerance. The main result is proved using elementary topological properties for discretized conserved quantities which are equicontinuous. In particular, long-term stability is also shown using an averaging identity when the discretized conserved quantities do not explicitly depend on time steps. Numerical results are presented to illustrate the long-term stability result.

math.NA↗

Conservative methods for dynamical systems

We show a novel systematic way to construct conservative finite difference schemes for quasilinear first-order system of ordinary differential equations with conserved quantities. In particular, this includes both autonomous and non-autonomous dynamical systems with conserved quantities of arbitrary forms, such as time-dependent conserved quantities. Sufficient conditions to construct conservative schemes of arbitrary order are derived using the multiplier method. General formulas for first-order conservative schemes are constructed using divided difference calculus. New conservative schemes are found for various dynamical systems such as Euler's equation of rigid body rotation, Lotka-Volterra systems, the planar restricted three-body problem and the damped harmonic oscillator.

math.NA↗

The multiplier method to construct conservative finite difference schemes for ordinary and partial differential equations

We present the multiplier method of constructing conservative finite difference schemes for ordinary and partial differential equations. Given a system of differential equations possessing conservation laws, our approach is based on discretizing conservation law multipliers and their associated density and flux functions. We show that the proposed discretization is consistent for any order of accuracy when the discrete multiplier has a multiplicative inverse. Moreover, we show that by construction, discrete densities can be exactly conserved. In particular, the multiplier method does not require the system to possess a Hamiltonian or variational structure. Examples, including dissipative problems, are given to illustrate the method. In the case when the inverse of the discrete multiplier becomes singular, consistency of the method is also established for scalar ODEs provided the discrete multiplier and density are zero-compatible.

math.NA↗

Landau-Zener transitions in the presence of spin environment

We study the effect of an environment consisting of noninteracting two level systems on Landau-Zener transitions with an interest on the performance of an adiabatic quantum computer. We show that if the environment is initially at zero temperature, it does not affect the transition probability. An excited environment, however, will always increase the probability of making a transition out of the ground state. For the case of equal intermediate gaps, we find an analytical upper bound for the transition probability in the limit of large number of environmental spins. We show that such an environment will only suppress the probability of success for adiabatic quantum computation by at most a factor close to 1/2.

cond-mat.mes-hall↗