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Angela Andreella

Publications and source records attributed to Angela Andreella.

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Post-Selection Inference for Multiverse Analysis in Mixed-Effects Models (PIMAX)

Sign-flipping score tests provide robust inference in generalized linear models under variance misspecification and form the basis of two recent inferential frameworks: post-selection inference in multiverse analysis (PIMA) and the sign-flipping score-based two-stage summary-statistics approach (flip2sss). PIMA provides asymptotically valid inference across a multiverse of model specifications, whereas flip2sss extends sign-flipping score testing to longitudinal and hierarchical data through cluster-level summary statistics. In this paper, we combine these two approaches to develop PIMAX, a multiverse inferential framework for clustered observations. The resulting method extends post-selection inference to clustered-data settings, accommodating heteroscedasticity, unbalanced designs, and within-cluster dependence. Given a multiverse of candidate specifications, PIMAX provides a global p-value for testing whether any specification exhibits a non-zero effect (weak control of the family-wise error rate, FWER), lower confidence bounds on the number of true discoveries, and multiplicity-adjusted p-values for identifying the specific contributing specifications (strong FWER control). By avoiding inference based on a fully specified random-effects covariance structure, PIMAX solves a key source of type I error inflation due to random-effects misspecification while enabling inference across a multiverse of fixed-effects specifications.

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Multivariate mixed models with model-free random effects

Linear mixed models are widely used to analyze non-independent data, but inference for fixed effects can be unreliable under misspecification of the random-effects distribution, inaccurate Fisher information estimation, or convergence failures, leading to a lack of control over false positives. These difficulties are amplified in multivariate settings, where within-cluster and between-response dependence must be modeled jointly. We propose a testing procedure for fixed effects in multivariate linear mixed models that avoids Fisher information estimation and does not require correct specification of the random-effects distribution by combining score statistics with clusterwise sign-flipping transformations. Our method accommodates both forms of dependence and yields asymptotically valid inference under weak distributional assumptions on the data-generating process.

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Topic-informed dynamic mixture model for occupational heterogeneity in health risk behaviors

Behavioral risk factors, i.e., smoking, poor nutrition, alcohol misuse, and physical inactivity (SNAP), are leading contributors to chronic diseases and healthcare costs worldwide. Their prevalence is shaped %not only by demographic characteristics %but and also by contextual ones such as socioeconomic and occupational environments. In this study, we leverage data from the Italian health and behavioral surveillance system PASSI to model SNAP behaviors through a Bayesian framework that integrates textual information on occupations. We use Structural Topic Modeling (STM) to cluster free-text job descriptions into latent occupational groups, which inform mixture weights in a multivariate ordered probit model. Covariate effects are allowed to vary across occupational clusters and evolve over time. To enhance interpretability and variable selection, we impose non-local spike-and-slab priors on regression coefficients. Finally, an online learning algorithm based on sequential Monte Carlo enables efficient updating as new data become available. This dynamic, scalable, and interpretable approach permits observing how occupational contexts modulate the impact of socio-demographic factors on health behaviors, providing valuable insights for targeted public health interventions.

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Inference on multiple quantiles in regression models by a rank-score approach

This paper tackles the challenge of performing multiple quantile regressions across different quantile levels and the associated problem of controlling the familywise error rate, an issue that is generally overlooked in practice. We propose a multivariate extension of the rank-score test and embed it within a closed-testing procedure to efficiently account for multiple testing. Then we further generalize the multivariate test to enhance statistical power against alternatives in selected directions. Theoretical foundations and simulation studies demonstrate that our method effectively controls the familywise error rate while achieving higher power than traditional corrections, such as Bonferroni.

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The Perceived Impact of Environment on Health in Italy: a Penalized Ordinal Regression Approach

Understanding how individuals perceive their living environment is a complex task, as it reflects both personal and contextual determinants. In this paper, we address this task by analyzing the environmental module of the Italian nationwide health surveillance system PASSI (Progressi delle Aziende Sanitarie per la Salute in Italia), integrating it with contextual information at the municipal level, including socio-economic indicators, pollution exposure, and other geographical characteristics. Methodologically, we adopt a penalized semi-parallel cumulative ordinal regression model to analyze how subjective perceptions are shaped by both personal and territorial determinants. The approach balances flexibility and interpretability by allowing both parallel and non-parallel effects while regularizing estimates to address multicollinearity and separation issues. We use the model as an analytical tool to uncover the determinants of positivity and neutrality in environmental perceptions, defined as factors that contribute the most to improving perception or increasing the sense of neutrality. The results are diverse. First, results reveal significant heterogeneity across Italian territories, indicating that local characteristics strongly shape environmental perception. Second, various individual factors interact with contextual influences to shape perceptions. Third, hazardous environmental factors, such as higher PM2.5 levels, appear to be associated with poorer environmental perception, suggesting a tendency among respondents to recognize specific environmental issues. Overall, the approach demonstrates strong potential for application and provides useful insights for environmental policy planning.

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A two-step model to study the inclusivity's distribution of Italian early childhood education and care services

This study investigates how to define and measure inclusivity in Italy's early childhood education and care (ECEC) services, bringing to light the gap between legislative principles and local/regional applications. The Italian legislative decree n. 65/2017 prescribes inclusivity in ECEC, defined as being open to all children and indicating it as a top priority. To delve into this concept, we propose a two-step model. First, a latent trait model estimates an inclusivity index as a latent variable. Then, a mixed quantile model examines the distribution of this novel latent inclusivity index across Italian regions. Our findings reveal a substantial variation in inclusivity across Italy. In addition, a proper indicator based on the latent inclusivity index defined in the first step is provided at the NUTS-3 level using the empirical best predictor approach. From our analysis, public facilities demonstrate a higher level of inclusivity compared to their private counterparts. Despite these challenges, we are compelled to identify positive scenarios that can serve as models for regions facing more critical situations. Besides its methodological advancement, this paper provides policymakers and stakeholders with an evident call to action, offering valuable insights into the inclusivity landscape of Italian ECEC services. It underscores the urgent need to standardize the accessibility characteristics of ECEC services throughout Italy to ensure equitable access for all children.

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Towards a power analysis for PLS-based methods

In recent years, power analysis has become widely used in applied sciences, with the increasing importance of the replicability issue. When distribution-free methods, such as Partial Least Squares (PLS)-based approaches, are considered, formulating power analysis turns out to be challenging. In this study, we introduce the methodological framework of a new procedure for performing power analysis when PLS-based methods are used. Data are simulated by the Monte Carlo method, assuming the null hypothesis of no effect is false and exploiting the latent structure estimated by PLS in the pilot data. In this way, the complex correlation data structure is explicitly considered in power analysis and sample size estimation. The paper offers insights into selecting statistical tests for the power analysis procedure, comparing accuracy-based tests and those based on continuous parameters estimated by PLS. Simulated and real datasets are investigated to show how the method works in practice.

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Selective inference for fMRI cluster-wise analysis, issues, and recommendations for critical vector selection: A comment on Blain et al

Two permutation-based methods for simultaneous inference on the proportion of active voxels in cluster-wise brain imaging analysis have recently been published: Notip (Blain et al. 2022) and pARI (Andreella et al. 2023). Both rely on the definition of a critical vector of ordered p-values, chosen from a family of candidate vectors, but differ in how the family is defined: computed from randomization of external data for Notip and determined a priori for pARI. These procedures were compared to other proposals in the literature, but an extensive comparison between the two methods is missing due to their parallel publication. We provide such a comparison and find that pARI outperforms Notip if both methods are applied under their recommended settings. However, each method carries different advantages and drawbacks.

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Robust Inference for Generalized Linear Mixed Models: An Approach Based on Score Sign Flipping

Despite the versatility of generalized linear mixed models in handling complex experimental designs, they often suffer from misspecification and convergence problems. This makes inference on the values of coefficients problematic. To address these challenges, we propose a robust extension of the score-based statistical test using sign-flipping transformations. Our approach efficiently handles within-variance structure and heteroscedasticity, ensuring accurate regression coefficient testing. The approach is illustrated by analyzing the reduction of health issues over time for newly adopted children. The model is characterized by a binomial response with unbalanced frequencies and several categorical and continuous predictors. The proposed approach efficiently deals with critical problems related to longitudinal nonlinear models, surpassing common statistical approaches such as generalized estimating equations and generalized linear mixed models.

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Permutation-based true discovery proportions for functional Magnetic Resonance Imaging cluster analysis

We propose a permutation-based method for testing a large collection of hypotheses simultaneously. Our method provides lower bounds for the number of true discoveries in any selected subset of hypotheses. These bounds are simultaneously valid with high confidence. The methodology is particularly useful in functional Magnetic Resonance Imaging cluster analysis, where it provides a confidence statement on the percentage of truly activated voxels within clusters of voxels, avoiding the well-known spatial specificity paradox. We offer a user-friendly tool to estimate the percentage of true discoveries for each cluster while controlling the family-wise error rate for multiple testing and taking into account that the cluster was chosen in a data-driven way. The method adapts to the spatial correlation structure that characterizes functional Magnetic Resonance Imaging data, gaining power over parametric approaches.

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Procrustes-based distances for exploring between-matrices similarity

The statistical shape analysis called Procrustes analysis minimizes the distance between matrices by similarity transformations. The method returns a set of optimal orthogonal matrices, which project each matrix into a common space. This manuscript presents two types of distances derived from Procrustes analysis for exploring between-matrices similarity. The first one focuses on the residuals from the Procrustes analysis, i.e., the residual-based distance metric. In contrast, the second one exploits the fitted orthogonal matrices, i.e., the rotational-based distance metric. Thanks to these distances, similarity-based techniques such as the multidimensional scaling method can be applied to visualize and explore patterns and similarities among observations. The proposed distances result in being helpful in functional magnetic resonance imaging (fMRI) data analysis. The brain activation measured over space and time can be represented by a matrix. The proposed distances applied to a sample of subjects -- i.e., matrices -- revealed groups of individuals sharing patterns of neural brain activation.

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Enhanced hyperalignment via spatial prior information

Functional alignment between subjects is an important assumption of functional magnetic resonance imaging (fMRI) group-level analysis. However, it is often violated in practice, even after alignment to a standard anatomical template. Hyperalignment, based on sequential Procrustes orthogonal transformations, has been proposed as a method of aligning shared functional information into a common high-dimensional space and thereby improving inter-subject analysis. Though successful, current hyperalignment algorithms have a number of shortcomings, including difficulties interpreting the transformations, a lack of uniqueness of the procedure, and difficulties performing whole-brain analysis. To resolve these issues, we propose the ProMises (Procrustes von Mises-Fisher) model. We reformulate functional alignment as a statistical model and impose a prior distribution on the orthogonal parameters (the von Mises-Fisher distribution). This allows for the embedding of anatomical information into the estimation procedure by penalizing the contribution of spatially distant voxels when creating the shared functional high-dimensional space. Importantly, the transformations, aligned images, and related results are all unique. In addition, the proposed method allows for efficient whole-brain functional alignment. In simulations and application to data from four fMRI studies we find that ProMises improves inter-subject classification in terms of between-subject accuracy and interpretability compared to standard hyperalignment algorithms.

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A predictive model for planning emergency events rescue during COVID-19 in Lombardy, Italy

Italy, particularly the Lombardy region, was among the first countries outside of Asia to report cases of COVID-19. The emergency medical service called Regional Emergency Agency (AREU) coordinates the intra- and inter-regional non-hospital emergency network and the European emergency number service in Lombardy. AREU must deal with daily and seasonal variations of call volume. The number and type of emergency calls changed dramatically during the COVID-19 pandemic. A model to predict incoming calls and how many of these turn into events, i.e., dispatch of transport and equipment until the rescue is completed, was developed to address the emergency period. We used the generalized additive model with a negative binomial family to predict the number of events one, two, five, and seven days ahead. The over-dispersion of the data was tackled by using the negative binomial family and the nonlinear relationship between the number of events and covariates (e.g., seasonal effects) by smoothing splines. The model coefficients show the effect of variables, e.g., the day of the week, on the number of events and how these effects change during the pre-COVID-19 period. The proposed model returns reasonable mean absolute errors for most of the 2020-2021 period.

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Procrustes analysis for high-dimensional data

The Procrustes-based perturbation model (Goodall, 1991) allows minimization of the Frobenius distance between matrices by similarity transformation. However, it suffers from non-identifiability, critical interpretation of the transformed matrices, and inapplicability in high-dimensional data. We provide an extension of the perturbation model focused on the high-dimensional data framework, called the ProMises (Procrustes von Mises-Fisher) model. The ill-posed and interpretability problems are solved by imposing a proper prior distribution for the orthogonal matrix parameter (i.e., the von Mises-Fisher distribution) which is a conjugate prior, resulting in a fast estimation process. Furthermore, we present the Efficient ProMises model for the high-dimensional framework, useful in neuroimaging, where the problem has much more than three dimensions. We found a great improvement in functional magnetic resonance imaging (fMRI) connectivity analysis because the ProMises model permits incorporation of topological brain information in the alignment's estimation process.

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