SearcharxivSearch

arXiv subjects

Angela Burden

Publications and source records attributed to Angela Burden.

At least 19 recordsLinked to original sources

From Abstract to Actionable: Pairwise Shapley Values for Explainable AI

Explainable AI (XAI) is critical for ensuring transparency, accountability, and trust in machine learning systems as black-box models are increasingly deployed within high-stakes domains. Among XAI methods, Shapley values are widely used for their fairness and consistency axioms. However, prevalent Shapley value approximation methods commonly rely on abstract baselines or computationally intensive calculations, which can limit their interpretability and scalability. To address such challenges, we propose Pairwise Shapley Values, a novel framework that grounds feature attributions in explicit, human-relatable comparisons between pairs of data instances proximal in feature space. Our method introduces pairwise reference selection combined with single-value imputation to deliver intuitive, model-agnostic explanations while significantly reducing computational overhead. Here, we demonstrate that Pairwise Shapley Values enhance interpretability across diverse regression and classification scenarios--including real estate pricing, polymer property prediction, and drug discovery datasets. We conclude that the proposed methods enable more transparent AI systems and advance the real-world applicability of XAI.

cs.LG

The environmental dependence of the baryon acoustic peak in the Baryon Oscillation Spectroscopic Survey CMASS sample

The environmental dependence of galaxy clustering encodes information about the physical processes governing the growth of cosmic structure. We analyze the baryon acoustic peak as a function of environment in the galaxy correlation function of the Baryon Oscillation Spectroscopic Survey CMASS sample. Dividing the sample into three subsets by smoothed local overdensity, we detect acoustic peaks in the six separate auto-correlation and cross-correlation functions of the sub-samples. Fitting models to these correlation functions, calibrated by mock galaxy and dark matter catalogues, we find that the inferred distance scale is independent of environment, and consistent with the result of analyzing the combined sample. The shape of the baryon acoustic feature, and the accuracy of density-field reconstruction in the Zeldovich approximation, varies with environment. By up-weighting underdense regions and down-weighting overdense regions in their contribution to the full-sample correlation function, by up to 50%, we achieve a fractional improvement of a few per cent in the precision of baryon acoustic oscillation fits to the CMASS data and mock catalogues: the scatter in the preferred-scale fits to the ensemble of mocks improves from 1.45% to 1.34% (pre-reconstruction) and 1.03% to 1.00% (post-reconstruction). These results are consistent with the notion that the acoustic peak is sharper in underdense environments.

astro-ph.CO

Unbiased clustering estimates with the DESI fibre assignment

The Emission Line Galaxy survey made by the Dark Energy Spectroscopic Instrument (DESI) survey will be created from five passes of the instrument on the sky. On each pass, the constrained mobility of the ends of the fibres in the DESI focal plane means that the angular-distribution of targets that can be observed is limited. Thus, the clustering of samples constructed using a limited number of passes will be strongly affected by missing targets. In two recent papers, we showed how the effect of missing galaxies can be corrected when calculating the correlation function using a weighting scheme for pairs. Using mock galaxy catalogues we now show that this method provides an unbiased estimator of the true correlation function for the DESI survey after any number of passes. We use multiple mocks to determine the expected errors given one to four passes, compared to an idealised survey observing an equivalent number of randomly selected targets. On BAO scales, we find that the error is a factor 2 worse after one pass, but that after three or more passes, the errors are very similar. Thus we find that the fibre assignment strategy enforced by the design of DESI will not affect the cosmological measurements to be made by the survey, and can be removed as a potential risk for this experiment.

astro-ph.CO

Mitigating the Impact of the DESI Fiber Assignment on Galaxy Clustering

We present a simple strategy to mitigate the impact of an incomplete spectroscopic redshift galaxy sample as a result of fiber assignment and survey tiling. The method has been designed for the Dark Energy Spectroscopic Instrument (DESI) galaxy survey but may have applications beyond this. We propose a modification to the usual correlation function that nulls the almost purely angular modes affected by survey incompleteness due to fiber assignment. Predictions of this modified statistic can be calculated given a model of the two point correlation function. The new statistic can be computed with a slight modification to the data catalogues input to the standard correlation function code and does not incur any additional computational time. Finally we show that the spherically averaged baryon acoustic oscillation signal is not biased by the new statistic.

astro-ph.CO

The DESI Experiment Part I: Science,Targeting, and Survey Design

DESI (Dark Energy Spectroscopic Instrument) is a Stage IV ground-based dark energy experiment that will study baryon acoustic oscillations (BAO) and the growth of structure through redshift-space distortions with a wide-area galaxy and quasar redshift survey. To trace the underlying dark matter distribution, spectroscopic targets will be selected in four classes from imaging data. We will measure luminous red galaxies up to $z=1.0$. To probe the Universe out to even higher redshift, DESI will target bright [O II] emission line galaxies up to $z=1.7$. Quasars will be targeted both as direct tracers of the underlying dark matter distribution and, at higher redshifts ($ 2.1 < z < 3.5$), for the Ly-$\alpha$ forest absorption features in their spectra, which will be used to trace the distribution of neutral hydrogen. When moonlight prevents efficient observations of the faint targets of the baseline survey, DESI will conduct a magnitude-limited Bright Galaxy Survey comprising approximately 10 million galaxies with a median $z\approx 0.2$. In total, more than 30 million galaxy and quasar redshifts will be obtained to measure the BAO feature and determine the matter power spectrum, including redshift space distortions.

astro-ph.IM

The DESI Experiment Part II: Instrument Design

DESI (Dark Energy Spectropic Instrument) is a Stage IV ground-based dark energy experiment that will study baryon acoustic oscillations and the growth of structure through redshift-space distortions with a wide-area galaxy and quasar redshift survey. The DESI instrument is a robotically-actuated, fiber-fed spectrograph capable of taking up to 5,000 simultaneous spectra over a wavelength range from 360 nm to 980 nm. The fibers feed ten three-arm spectrographs with resolution $R= \lambda/\Delta\lambda$ between 2000 and 5500, depending on wavelength. The DESI instrument will be used to conduct a five-year survey designed to cover 14,000 deg$^2$. This powerful instrument will be installed at prime focus on the 4-m Mayall telescope in Kitt Peak, Arizona, along with a new optical corrector, which will provide a three-degree diameter field of view. The DESI collaboration will also deliver a spectroscopic pipeline and data management system to reduce and archive all data for eventual public use.

astro-ph.IM

The clustering of galaxies in the completed SDSS-III Baryon Oscillation Spectroscopic Survey: Observational systematics and baryon acoustic oscillations in the correlation function

We present baryon acoustic oscillation (BAO) scale measurements determined from the clustering of 1.2 million massive galaxies with redshifts 0.2 < z < 0.75 distributed over 9300 square degrees, as quantified by their redshift-space correlation function. In order to facilitate these measurements, we define, describe, and motivate the selection function for galaxies in the final data release (DR12) of the SDSS III Baryon Oscillation Spectroscopic Survey (BOSS). This includes the observational footprint, masks for image quality and Galactic extinction, and weights to account for density relationships intrinsic to the imaging and spectroscopic portions of the survey. We simulate the observed systematic trends in mock galaxy samples and demonstrate that they impart no bias on baryon acoustic oscillation (BAO) scale measurements and have a minor impact on the recovered statistical uncertainty. We measure transverse and radial BAO distance measurements in 0.2 < z < 0.5, 0.5 < z < 0.75, and (overlapping) 0.4 < z < 0.6 redshift bins. In each redshift bin, we obtain a precision that is 2.7 per cent or better on the radial distance and 1.6 per cent or better on the transverse distance. The combination of the redshift bins represents 1.8 per cent precision on the radial distance and 1.1 per cent precision on the transverse distance. This paper is part of a set that analyses the final galaxy clustering dataset from BOSS. The measurements and likelihoods presented here are combined with others in Alam et al. (2016) to produce the final cosmological constraints from BOSS.

astro-ph.CO

The clustering of galaxies in the completed SDSS-III Baryon Oscillation Spectroscopic Survey: cosmological analysis of the DR12 galaxy sample

We present cosmological results from the final galaxy clustering data set of the Baryon Oscillation Spectroscopic Survey, part of the Sloan Digital Sky Survey III. Our combined galaxy sample comprises 1.2 million massive galaxies over an effective area of 9329 deg^2 and volume of 18.7 Gpc^3, divided into three partially overlapping redshift slices centred at effective redshifts 0.38, 0.51, and 0.61. We measure the angular diameter distance DM and Hubble parameter H from the baryon acoustic oscillation (BAO) method after applying reconstruction to reduce non-linear effects on the BAO feature. Using the anisotropic clustering of the pre-reconstruction density field, we measure the product DM*H from the Alcock-Paczynski (AP) effect and the growth of structure, quantified by f{\sigma}8(z), from redshift-space distortions (RSD). We combine measurements presented in seven companion papers into a set of consensus values and likelihoods, obtaining constraints that are tighter and more robust than those from any one method. Combined with Planck 2015 cosmic microwave background measurements, our distance scale measurements simultaneously imply curvature {\Omega}_K =0.0003+/-0.0026 and a dark energy equation of state parameter w = -1.01+/-0.06, in strong affirmation of the spatially flat cold dark matter model with a cosmological constant ({\Lambda}CDM). Our RSD measurements of f{\sigma}_8, at 6 per cent precision, are similarly consistent with this model. When combined with supernova Ia data, we find H0 = 67.3+/-1.0 km/s/Mpc even for our most general dark energy model, in tension with some direct measurements. Adding extra relativistic species as a degree of freedom loosens the constraint only slightly, to H0 = 67.8+/-1.2 km/s/Mpc. Assuming flat {\Lambda}CDM we find {\Omega}_m = 0.310+/-0.005 and H0 = 67.6+/-0.5 km/s/Mpc, and we find a 95% upper limit of 0.16 eV/c^2 on the neutrino mass sum.

astro-ph.CO

The Clustering of Galaxies in the Completed SDSS-III Baryon Oscillation Spectroscopic Survey: Cosmic Flows and Cosmic Web from Luminous Red Galaxies

We present a Bayesian phase-space reconstruction of the cosmic large-scale matter density and velocity fields from the SDSS-III Baryon Oscillations Spectroscopic Survey Data Release 12 (BOSS DR12) CMASS galaxy clustering catalogue. We rely on a given $\Lambda$CDM cosmology, a mesh resolution in the range of 6-10 $h^{-1}$ Mpc, and a lognormal-Poisson model with a redshift dependent nonlinear bias. The bias parameters are derived from the data and a general renormalised perturbation theory approach. We use combined Gibbs and Hamiltonian sampling, implemented in the \textsc{argo} code, to iteratively reconstruct the dark matter density field and the coherent peculiar velocities of individual galaxies, correcting hereby for coherent redshift space distortions (RSD). Our tests relying on accurate $N$-body based mock galaxy catalogues, show unbiased real space power spectra of the nonlinear density field up to $k\sim0.2\, h$ Mpc$^{-1}$, and vanishing quadrupoles down to $r\sim20\,h^{-1}$ Mpc. We also demonstrate that the nonlinear cosmic web can be obtained from the tidal field tensor based on the Gaussian component of the reconstructed density field. We find that the reconstructed velocities have a statistical correlation coefficient compared to the true velocities of each individual lightcone mock galaxy of $r\sim0.68$ including about 10% of satellite galaxies with virial motions (about $r=0.75$ without satellites). The power spectra of the velocity divergence agree well with theoretical predictions up to $k\sim0.2\,h\,{\rm Mpc}^{-1}$. This work will be especially useful to improve, e.g. BAO reconstructions, kinematic Sunyaev-Zeldovich (kSZ), integrated Sachs-Wolfe (ISW) measurements, or environmental studies.

astro-ph.CO

Reconstruction in Fourier space

We present a fast iterative FFT-based reconstruction algorithm that allows for non- parallel redshift-space distortions (RSD). We test our algorithm on both N-body dark matter simulations and mock distributions of galaxies designed to replicate galaxy survey conditions. We compare solenoidal and irrotational components of the redshift distortion and show that an approximation of this distortion leads to a better estimate of the real-space potential (and therefore faster convergence) than ignoring the RSD when estimating the displacement field. Our iterative reconstruction scheme converges in two iterations for the mock samples corresponding to BOSS CMASS DR11 when we start with an approximation of the RSD. The scheme takes six iterations when the initial estimate, measured from the redshift-space overdensity, has no RSD correction. Slower convergence would be expected for surveys covering a larger angle on the sky. We show that this FFT based method provides a better estimate of the real space displacement field than a configuration space method that uses finite difference routines to compute the potential for the same grid resolution. Finally we show that a lognormal transform of the overdensity, used as a proxy for the linear overdensity, is beneficial in estimating the full displacement field from a dense sample of tracers. However the lognormal transform of the overdensity does not perform well when estimating the displacements from sparser simulations with a more realistic galaxy density.

astro-ph.CO

Efficient Reconstruction of Linear Baryon Acoustic Oscillations in Galaxy Surveys

Reconstructing an estimate of linear Baryon Acoustic Oscillations (BAO) from an evolved galaxy field has become a standard technique in recent analyses. By partially removing non-linear damping caused by bulk motions, the real-space BAO peak in the correlation function is sharpened, and oscillations in the power spectrum are visible to smaller scales. In turn these lead to stronger measurements of the BAO scale. Future surveys are being designed assuming that this improvement has been applied, and this technique is therefore of critical importance for future BAO measurements. A number of reconstruction techniques are available, but the most widely used is a simple algorithm that decorrelates large-scale and small-scale modes approximately removing the bulk-flow displacements by moving the overdensity field (Eisenstein et al. 2007; Padmanabhan, White & Cohn 2009). We consider the practical implementation of this algorithm, looking at the efficiency of reconstruction as a function of the assumptions made for the bulk-flow scale, the shot noise level in a random catalogue used to quantify the mask and the method used to estimate the bulk-flow shifts. We also examine the efficiency of reconstruction against external factors including galaxy density, volume and edge effects, and consider their impact for future surveys. Throughout we make use of the mocks catalogues created for the Baryon Oscillation Spectroscopic Survey (BOSS) Date Release 11 samples covering 0.43 < z < 0.7 (CMASS) and 0.15 < z < 0.43 (LOWZ), to empirically test these changes.

astro-ph.CO

The Eleventh and Twelfth Data Releases of the Sloan Digital Sky Survey: Final Data from SDSS-III

The third generation of the Sloan Digital Sky Survey (SDSS-III) took data from 2008 to 2014 using the original SDSS wide-field imager, the original and an upgraded multi-object fiber-fed optical spectrograph, a new near-infrared high-resolution spectrograph, and a novel optical interferometer. All the data from SDSS-III are now made public. In particular, this paper describes Data Release 11 (DR11) including all data acquired through 2013 July, and Data Release 12 (DR12) adding data acquired through 2014 July (including all data included in previous data releases), marking the end of SDSS-III observing. Relative to our previous public release (DR10), DR12 adds one million new spectra of galaxies and quasars from the Baryon Oscillation Spectroscopic Survey (BOSS) over an additional 3000 sq. deg of sky, more than triples the number of H-band spectra of stars as part of the Apache Point Observatory (APO) Galactic Evolution Experiment (APOGEE), and includes repeated accurate radial velocity measurements of 5500 stars from the Multi-Object APO Radial Velocity Exoplanet Large-area Survey (MARVELS). The APOGEE outputs now include measured abundances of 15 different elements for each star. In total, SDSS-III added 2350 sq. deg of ugriz imaging; 155,520 spectra of 138,099 stars as part of the Sloan Exploration of Galactic Understanding and Evolution 2 (SEGUE-2) survey; 2,497,484 BOSS spectra of 1,372,737 galaxies, 294,512 quasars, and 247,216 stars over 9376 sq. deg; 618,080 APOGEE spectra of 156,593 stars; and 197,040 MARVELS spectra of 5,513 stars. Since its first light in 1998, SDSS has imaged over 1/3 of the Celestial sphere in five bands and obtained over five million astronomical spectra.

astro-ph.IM

Cosmological implications of baryon acoustic oscillation (BAO) measurements

We derive constraints on cosmological parameters and tests of dark energy models from the combination of baryon acoustic oscillation (BAO) measurements with cosmic microwave background (CMB) and Type Ia supernova (SN) data. We take advantage of high-precision BAO measurements from galaxy clustering and the Ly-alpha forest (LyaF) in the BOSS survey of SDSS-III. BAO data alone yield a high confidence detection of dark energy, and in combination with the CMB angular acoustic scale they further imply a nearly flat universe. Combining BAO and SN data into an "inverse distance ladder" yields a 1.7% measurement of $H_0=67.3 \pm1.1$ km/s/Mpc. This measurement assumes standard pre-recombination physics but is insensitive to assumptions about dark energy or space curvature, so agreement with CMB-based estimates that assume a flat LCDM cosmology is an important corroboration of this minimal cosmological model. For open LCDM, our BAO+SN+CMB combination yields $\Omega_m=0.301 \pm 0.008$ and curvature $\Omega_k=-0.003 \pm 0.003$. When we allow more general forms of evolving dark energy, the BAO+SN+CMB parameter constraints remain consistent with flat LCDM. While the overall $\chi^2$ of model fits is satisfactory, the LyaF BAO measurements are in moderate (2-2.5 sigma) tension with model predictions. Models with early dark energy that tracks the dominant energy component at high redshifts remain consistent with our constraints. Expansion history alone yields an upper limit of 0.56 eV on the summed mass of neutrino species, improving to 0.26 eV if we include Planck CMB lensing. Standard dark energy models constrained by our data predict a level of matter clustering that is high compared to most, but not all, observational estimates. (Abridged)

astro-ph.CO

The Clustering of the SDSS DR7 Main Galaxy Sample I: A 4 per cent Distance Measure at z=0.15

We create a sample of spectroscopically identified galaxies with $z < 0.2$ from the Sloan Digital Sky Survey (SDSS) Data Release 7, covering 6813 deg$^2$. Galaxies are chosen to sample the highest mass haloes, with an effective bias of 1.5, allowing us to construct 1000 mock galaxy catalogs (described in Paper II), which we use to estimate statistical errors and test our methods. We use an estimate of the gravitational potential to "reconstruct" the linear density fluctuations, enhancing the Baryon Acoustic Oscillation (BAO) signal in the measured correlation function and power spectrum. Fitting to these measurements, we determine $D_{V}(z_{\rm eff}=0.15) = (664\pm25)(r_d/r_{d,{\rm fid}})$ Mpc; this is a better than 4 per cent distance measurement. This "fills the gap" in BAO distance ladder between previously measured local and higher redshift measurements, and affords significant improvement in constraining the properties of dark energy. Combining our measurement with other BAO measurements from BOSS and 6dFGS galaxy samples provides a 15 per cent improvement in the determination of the equation of state of dark energy and the value of the Hubble parameter at $z=0$ ($H_0$). Our measurement is fully consistent with the Planck results and the $\Lambda$CDM concordance cosmology, but increases the tension between Planck$+$BAO $H_0$ determinations and direct $H_0$ measurements.

astro-ph.CO

The clustering of galaxies in the SDSS-III Baryon Oscillation Spectroscopic Survey: mock galaxy catalogues for the low-redshift sample

We present one thousand mock galaxy catalogues for the analysis of the Low Redshift Sample (LOWZ, effective redshift z ~ 10.32) of the Baryon Oscillation Spectroscopic Survey Data Releases 10 and 11. These mocks have been created following the PTHalos method of Manera13 et al. (2013) revised to include new developments. The main improvement is the introduction of a redshift dependence in the Halo Occupation Distribution in order to account for the change of the galaxy number density with redshift. These mock catalogues are used in the analyses of the LOWZ galaxy clustering by the BOSS collaboration.

astro-ph.CO

The clustering of galaxies in the SDSS-III Baryon Oscillation Spectroscopic Survey: galaxy clustering measurements in the low redshift sample of Data Release 11

We present the distance measurement to z = 0.32 using the 11th data release of the Sloan Digital Sky Survey-III Baryon Acoustic Oscillation Survey (BOSS). We use 313,780 galaxies of the low-redshift (LOWZ) sample over 7,341 square-degrees to compute $D_V = (1264 \pm 25)(r_d/r_{d,fid})$ - a sub 2% measurement - using the baryon acoustic feature measured in the galaxy two-point correlation function and power-spectrum. We compare our results to those obtained in DR10. We study observational systematics in the LOWZ sample and quantify potential effects due to photometric offsets between the northern and southern Galactic caps. We find the sample to be robust to all systematic effects found to impact on the targeting of higher-redshift BOSS galaxies, and that the observed north-south tensions can be explained by either limitations in photometric calibration or by sample variance, and have no impact on our final result. Our measurement, combined with the baryonic acoustic scale at z = 0.57, is used in Anderson et al. (2013a) to constrain cosmological parameters.

astro-ph.CO

The Clustering of Galaxies in the SDSS-III Baryon Oscillation Spectroscopic Survey: Including covariance matrix errors

We present improved methodology for including covariance matrices in the error budget of Baryon Oscillation Spectroscopic Survey (BOSS) galaxy clustering measurements, revisiting Data Release 9 (DR9) analyses, and describing a method that is used in DR10/11 analyses presented in companion papers. The precise analysis method adopted is becoming increasingly important, due to the precision that BOSS can now reach: even using as many as 600 mock catalogues to estimate covariance of 2-point clustering measurements can still lead to an increase in the errors of ~20%, depending on how the cosmological parameters of interest are measured. In this paper we extend previous work on this contribution to the error budget, deriving formulae for errors measured by integrating over the likelihood, and to the distribution of recovered best-fit parameters fitting the simulations also used to estimate the covariance matrix. Both are situations that previous analyses of BOSS have considered. We apply the formulae derived to Baryon Acoustic Oscillation (BAO) and Redshift-Space Distortion (RSD) measurements from BOSS in our companion papers. To further aid these analyses, we consider the optimum number of bins to use for 2-point measurements using the monopole power spectrum or correlation function for BAO, and the monopole and quadrupole moments of the correlation function for anisotropic-BAO and RSD measurements.

astro-ph.CO

The clustering of galaxies in the SDSS-III Baryon Oscillation Spectroscopic Survey: Baryon Acoustic Oscillations in the Data Release 10 and 11 galaxy samples

We present a one per cent measurement of the cosmic distance scale from the detections of the baryon acoustic oscillations in the clustering of galaxies from the Baryon Oscillation Spectroscopic Survey (BOSS), which is part of the Sloan Digital Sky Survey III (SDSS-III). Our results come from the Data Release 11 (DR11) sample, containing nearly one million galaxies and covering approximately $8\,500$ square degrees and the redshift range $0.2<z<0.7$. We also compare these results with those from the publicly released DR9 and DR10 samples. Assuming a concordance $\Lambda$CDM cosmological model, the DR11 sample covers a volume of 13\,Gpc${}^3$ and is the largest region of the Universe ever surveyed at this density. We measure the correlation function and power spectrum, including density-field reconstruction of the baryon acoustic oscillation (BAO) feature. The acoustic features are detected at a significance of over $7\,\sigma$ in both the correlation function and power spectrum. Fitting for the position of the acoustic features measures the distance relative to the sound horizon at the drag epoch, $r_d$, which has a value of $r_{d,{\rm fid}}=149.28\,$Mpc in our fiducial cosmology. We find $D_V=(1264\pm25\,{\rm Mpc})(r_d/r_{d,{\rm fid}})$ at $z=0.32$ and $D_V=(2056\pm20\,{\rm Mpc})(r_d/r_{d,{\rm fid}})$ at $z=0.57$. At 1.0 per cent, this latter measure is the most precise distance constraint ever obtained from a galaxy survey. Separating the clustering along and transverse to the line-of-sight yields measurements at $z=0.57$ of $D_A=(1421\pm20\,{\rm Mpc})(r_d/r_{d,{\rm fid}})$ and $H=(96.8\pm3.4\,{\rm km/s/Mpc})(r_{d,{\rm fid}}/r_d)$. Our measurements of the distance scale are in good agreement with previous BAO measurements and with the predictions from cosmic microwave background data for a spatially flat cold dark matter model with a cosmological constant.

astro-ph.CO