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Angqi Li

Publications and source records attributed to Angqi Li.

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L-FAME: Longitudinal Focused Attention Meditation EEG Dataset and Benchmark

We introduce a novel Longitudinal Focused Attention Meditation Electroencephalography (L-FAME) dataset and an accompanying benchmark, designed to foster research into the neural effects of various meditation practices and the evolution of these effects over a six-week training period. The dataset contains EEG recordings and psychological assessments from 74 healthy college participants, collected at two distinct time points: pre-intervention and post-intervention. Participants were randomly assigned to one of three distinct meditation groups: two mantra-based techniques (SA-TA-NA-MA and Hare Krishna) and one Breath Focus practice. Leveraging this unique longitudinal and comparative dataset, we propose a benchmark suite comprising three distinct classification tasks: (1) cognitive state decoding to distinguish between resting and meditation states, (2) fine-grained classification of the specific meditation techniques, and (3) cross-session adaptation to evaluate model generalization across the longitudinal time gap. We provide comprehensive baseline results for these tasks utilizing a range of classical machine learning algorithms and deep learning architectures. The complete dataset, preprocessing pipelines, and benchmark evaluation code will be publicly released, offering a valuable resource and a standardized framework for the development and comparison of new analytical methods in computational meditation research and EEG-based machine learning. The dataset is available at https://huggingface.co/datasets/L-FAME-Dataset-Benchmark/L-FAME

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Scan-Adaptive Dynamic MRI Undersampling Using a Dictionary of Efficiently Learned Patterns

Cardiac MRI is limited by long acquisition times, which can lead to patient discomfort and motion artifacts. We aim to accelerate Cartesian dynamic cardiac MRI by learning efficient, scan-adaptive undersampling patterns that preserve diagnostic image quality. We develop a learning-based framework for designing scan- or slice-adaptive Cartesian undersampling masks tailored to dynamic cardiac MRI. Undersampling patterns are optimized using fully sampled training dynamic time-series data. At inference time, a nearest-neighbor search in low-frequency $k$-space selects an optimized mask from a dictionary of learned patterns. Our learned sampling approach improves reconstruction quality across multiple acceleration factors on public and in-house cardiac MRI datasets, including PSNR gains of 2-3 dB, reduced NMSE, improved SSIM, and higher radiologist ratings. The proposed scan-adaptive sampling framework enables faster and higher-quality dynamic cardiac MRI by adapting $k$-space sampling to individual scans.

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Scan-Adaptive MRI Undersampling Using Neighbor-based Optimization (SUNO)

Accelerated MRI involves collecting partial $k$-space measurements to reduce acquisition time, patient discomfort, and motion artifacts, and typically uses regular undersampling patterns or human-designed schemes. Recent works have studied population-adaptive sampling patterns learned from a group of patients (or scans). However, such patterns can be sub-optimal for individual scans, as they may fail to capture scan or slice-specific details, and their effectiveness can depend on the size and composition of the population. To overcome this issue, we propose a framework for jointly learning scan-adaptive Cartesian undersampling patterns and a corresponding reconstruction model from a training set. We use an alternating algorithm for learning the sampling patterns and the reconstruction model where we use an iterative coordinate descent (ICD) based offline optimization of scan-adaptive $k$-space sampling patterns for each example in the training set. A nearest neighbor search is then used to select the scan-adaptive sampling pattern at test time from initially acquired low-frequency $k$-space information. We applied the proposed framework (dubbed SUNO) to the fastMRI multi-coil knee and brain datasets, demonstrating improved performance over the currently used undersampling patterns at both $4\times$ and $8\times$ acceleration factors in terms of both visual quality and quantitative metrics. The code for the proposed framework is available at https://github.com/sidgautam95/adaptive-sampling-mri-suno. This paper has been accepted for publication in IEEE Transactions on Computational Imaging. The final published version is available at https://doi.org/10.1109/TCI.2026.3653330.

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Patient-Adaptive and Learned MRI Data Undersampling Using Neighborhood Clustering

There has been much recent interest in adapting undersampled trajectories in MRI based on training data. In this work, we propose a novel patient-adaptive MRI sampling algorithm based on grouping scans within a training set. Scan-adaptive sampling patterns are optimized together with an image reconstruction network for the training scans. The training optimization alternates between determining the best sampling pattern for each scan (based on a greedy search or iterative coordinate descent (ICD)) and training a reconstructor across the dataset. The eventual scan-adaptive sampling patterns on the training set are used as labels to predict sampling design using nearest neighbor search at test time. The proposed algorithm is applied to the fastMRI knee multicoil dataset and demonstrates improved performance over several baselines.

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