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Ardita Shkurti

Publications and source records attributed to Ardita Shkurti.

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Computational tuning of the elastic properties of low- and high-entropy ultra-high temperature ceramics

Ultra-high temperature ceramics (UHTCs) represent a class of crystalline materials for extreme environments. They can withstand extremely high temperatures but are mechanically difficult to work with due to their inherent brittleness. Mixture compounds, in particular high-entropy mixtures, offer a pathway to tune the physical properties of UHTCs such as their elastic constants. Here we fine-tune the MACE-MPA-0 universal machine-learning potential on rocksalt carbide UHTCs containing group IV-V metals and demonstrate that not only do the elastic constants deviate from the rule of mixtures approximation in the high-entropy limit, but also in the low-entropy limit of binary and ternary mixtures. We find that this is caused by distortion imposed by the lattice mismatch, enabling the tuning of the physical properties of UHTC mixtures in both low- and high-entropy compounds. We identify a three-component mixture compound, HfCVCZrC, as the best balance between synthesizability and toughness, and apply our developed MACE-UHTC model to identify a range of non-equimolar candidate compositions of this compound which may enable the synthesis of a mixture UHTC with a Young's modulus up to 40 GPa below that of ZrC.

cond-mat.mtrl-sci

ExTASY: Scalable and Flexible Coupling of MD Simulations and Advanced Sampling Techniques

For many macromolecular systems the accurate sampling of the relevant regions on the potential energy surface cannot be obtained by a single, long Molecular Dynamics (MD) trajectory. New approaches are required to promote more efficient sampling. We present the design and implementation of the Extensible Toolkit for Advanced Sampling and analYsis (ExTASY) for building and executing advanced sampling workflows on HPC systems. ExTASY provides Python based "templated scripts" that interface to an interoperable and high-performance pilot-based run time system, which abstracts the complexity of managing multiple simulations. ExTASY supports the use of existing highly-optimised parallel MD code and their coupling to analysis tools based upon collective coordinates which do not require a priori knowledge of the system to bias. We describe two workflows which both couple large "ensembles" of relatively short MD simulations with analysis tools to automatically analyse the generated trajectories and identify molecular conformational structures that will be used on-the-fly as new starting points for further "simulation-analysis" iterations. One of the workflows leverages the Locally Scaled Diffusion Maps technique; the other makes use of Complementary Coordinates techniques to enhance sampling and generate start-points for the next generation of MD simulations. We show that the ExTASY tools have been deployed on a range of HPC systems including ARCHER (Cray CX30), Blue Waters (Cray XE6/XK7), and Stampede (Linux cluster), and that good strong scaling can be obtained up to 1000s of MD simulations, independent of the size of each simulation. We discuss how ExTASY can be easily extended or modified by end-users to build their own workflows, and ongoing work to improve the usability and robustness of ExTASY.

cs.CE