arXiv subjects

Arlei Silva

Publications and source records attributed to Arlei Silva.

At least 19 recordsLinked to original sources

arXiv2026

From Model to Data (M2D): Shifting Complexity from GNNs to Graphs for Transparent Graph Learning

Graph Neural Networks (GNNs) achieve high performance but can be opaque to humans, making it difficult to understand and compare the many proposed architectures. While existing explainability methods attribute individual predictions to nodes, edges, or features, they do not provide architectural transparency or explain the fundamental performance gap between simple and more complex models. To address this limitation, we introduce Model-to-Data (M2D) distillation, a new framework that increases transparency by transferring model complexity into the data space. M2D distills the teacher model into an augmented graph with enriched features and structure, enabling a simple student to match the teacher's performance. By materializing model behavior in the data, our approach allows humans to inspect architectural advantages directly. We show that M2D reveals underlying mechanisms such as fairness objectives and attention-based aggregation in an interpretable way, enhancing GNN transparency while preserving performance.

cs.LG↗

arXiv2026

Mochi: Aligning Pre-training and Inference for Efficient Graph Foundation Models via Meta-Learning

We propose Mochi, a Graph Foundation Model that addresses task unification and training efficiency by adopting a meta-learning based training framework. Prior models pre-train with reconstruction-based objectives such as link prediction, and assume that the resulting representations can be aligned with downstream tasks through a separate unification step such as class prototypes. We demonstrate through synthetic and real-world experiments that this procedure, while simple and intuitive, has limitations that directly affect downstream task performance. To address these limitations, Mochi pre-trains on few-shot episodes that mirror the downstream evaluation protocol, aligning the training objective with inference rather than relying on a post-hoc unification step. We show that Mochi, along with its more powerful variant Mochi++, achieves competitive or superior performance compared to existing Graph Foundation Models across 25 real-world graph datasets spanning node classification, link prediction, and graph classification, while requiring 8$\sim$27 times less training time than the strongest baseline.

cs.LG↗

arXiv2025

Breaking the Dyadic Barrier: Rethinking Fairness in Link Prediction Beyond Demographic Parity

Link prediction is a fundamental task in graph machine learning with applications, ranging from social recommendation to knowledge graph completion. Fairness in this setting is critical, as biased predictions can exacerbate societal inequalities. Prior work adopts a dyadic definition of fairness, enforcing fairness through demographic parity between intra-group and inter-group link predictions. However, we show that this dyadic framing can obscure underlying disparities across subgroups, allowing systemic biases to go undetected. Moreover, we argue that demographic parity does not meet desired properties for fairness assessment in ranking-based tasks such as link prediction. We formalize the limitations of existing fairness evaluations and propose a framework that enables a more expressive assessment. Additionally, we propose a lightweight post-processing method combined with decoupled link predictors that effectively mitigates bias and achieves state-of-the-art fairness-utility trade-offs.

cs.LG↗

arXiv2025

DOPPLER: Dual-Policy Learning for Device Assignment in Asynchronous Dataflow Graphs

We study the problem of assigning operations in a dataflow graph to devices to minimize execution time in a work-conserving system, with emphasis on complex machine learning workloads. Prior learning-based methods often struggle due to three key limitations: (1) reliance on bulk-synchronous systems like TensorFlow, which under-utilize devices due to barrier synchronization; (2) lack of awareness of the scheduling mechanism of underlying systems when designing learning-based methods; and (3) exclusive dependence on reinforcement learning, ignoring the structure of effective heuristics designed by experts. In this paper, we propose Doppler, a three-stage framework for training dual-policy networks consisting of 1) a $\mathsf{SEL}$ policy for selecting operations and 2) a $\mathsf{PLC}$ policy for placing chosen operations on devices. Our experiments show that Doppler outperforms all baseline methods across tasks by reducing system execution time and additionally demonstrates sampling efficiency by reducing per-episode training time.

cs.LG↗

arXiv2025

Cross-Domain Graph Anomaly Detection via Test-Time Training with Homophily-Guided Self-Supervision

Graph Anomaly Detection (GAD) has demonstrated great effectiveness in identifying unusual patterns within graph-structured data. However, while labeled anomalies are often scarce in emerging applications, existing supervised GAD approaches are either ineffective or not applicable when moved across graph domains due to distribution shifts and heterogeneous feature spaces. To address these challenges, we present GADT3, a novel test-time training framework for cross-domain GAD. GADT3 combines supervised and self-supervised learning during training while adapting to a new domain during test time using only self-supervised learning by leveraging a homophily-based affinity score that captures domain-invariant properties of anomalies. Our framework introduces four key innovations to cross-domain GAD: an effective self-supervision scheme, an attention-based mechanism that dynamically learns edge importance weights during message passing, domain-specific encoders for handling heterogeneous features, and class-aware regularization to address imbalance. Experiments across multiple cross-domain settings demonstrate that GADT3 significantly outperforms existing approaches, achieving average improvements of over 8.2\% in AUROC and AUPRC compared to the best competing model.

cs.LG↗

arXiv2024

Attribute-Enhanced Similarity Ranking for Sparse Link Prediction

Link prediction is a fundamental problem in graph data. In its most realistic setting, the problem consists of predicting missing or future links between random pairs of nodes from the set of disconnected pairs. Graph Neural Networks (GNNs) have become the predominant framework for link prediction. GNN-based methods treat link prediction as a binary classification problem and handle the extreme class imbalance -- real graphs are very sparse -- by sampling (uniformly at random) a balanced number of disconnected pairs not only for training but also for evaluation. However, we show that the reported performance of GNNs for link prediction in the balanced setting does not translate to the more realistic imbalanced setting and that simpler topology-based approaches are often better at handling sparsity. These findings motivate Gelato, a similarity-based link-prediction method that applies (1) graph learning based on node attributes to enhance a topological heuristic, (2) a ranking loss for addressing class imbalance, and (3) a negative sampling scheme that efficiently selects hard training pairs via graph partitioning. Experiments show that Gelato outperforms existing GNN-based alternatives.

cs.LG↗

arXiv2024

How Millions Coordinate at Scale: Engagement, Collaboration, and Conflict in Three Editions of Reddit r/place

Mass peer-production environments are shaped by a complex interplay between decentralized coordination, platform design, and potential conflict over resources. While online infrastructures enable large-scale collaboration, they can also introduce coordination challenges and contested interactions among participants. The Reddit r/place experiment provides a unique socio-technical setting for studying these dynamics across three distinct editions (2017, 2022, and 2023). By allowing millions of participants to collaborate and compete as they update pixels on a finite shared digital canvas, the events generated fine-grained traces comprising hundreds of millions of actions taken over multiple days. In this paper, we examine how participation, collaboration, and conflict evolve within r/place. First, we conduct a longitudinal, cross-edition analysis of engagement and collaboration patterns across the 2017, 2022, and 2023 events. Second, to investigate collaborative activity beyond surviving final artifacts, we introduce a scalable graph-based dynamic clustering framework and apply it to the 2017 event to reconstruct coalition trajectories from behavioral interaction logs, enabling the analysis of both persistent and transient efforts. Our findings reveal recurring organizational patterns across editions: participation remains highly concentrated to few participants despite individual rate-limiting constraints, larger coalitions exhibit both greater coordination inefficiencies and lower median per-participant activity, while still success increasingly concentrates within large collaborative groups over the course of an event. Analysis of recovered coalition trajectories further shows that coalition outcomes are difficult to predict based on state characteristics during much of the event, highlighting the dynamic and contested nature of collaborative production in r/place.

cs.SI↗

arXiv2023

Sensor Placement for Learning in Flow Networks

Large infrastructure networks (e.g. for transportation and power distribution) require constant monitoring for failures, congestion, and other adversarial events. However, assigning a sensor to every link in the network is often infeasible due to placement and maintenance costs. Instead, sensors can be placed only on a few key links, and machine learning algorithms can be leveraged for the inference of missing measurements (e.g. traffic counts, power flows) across the network. This paper investigates the sensor placement problem for networks. We first formalize the problem under a flow conservation assumption and show that it is NP-hard to place a fixed set of sensors optimally. Next, we propose an efficient and adaptive greedy heuristic for sensor placement that scales to large networks. Our experiments, using datasets from real-world application domains, show that the proposed approach enables more accurate inference than existing alternatives from the literature. We demonstrate that considering even imperfect or incomplete ground-truth estimates can vastly improve the prediction error, especially when a small number of sensors is available.

eess.SP↗

arXiv2023

Fair Graph Machine Learning under Adversarial Missingness Processes

Graph Neural Networks (GNNs) have achieved state-of-the-art results in many relevant tasks where decisions might disproportionately impact specific communities. However, existing work on fair GNNs often assumes that either sensitive attributes are fully observed or they are missing completely at random. We show that an adversarial missingness process can inadvertently disguise a fair model through the imputation, leading the model to overestimate the fairness of its predictions. We address this challenge by proposing Better Fair than Sorry (BFtS), a fair missing data imputation model for sensitive attributes. The key principle behind BFtS is that imputations should approximate the worst-case scenario for fairness -- i.e. when optimizing fairness is the hardest. We implement this idea using a 3-player adversarial scheme where two adversaries collaborate against a GNN classifier, and the classifier minimizes the maximum bias. Experiments using synthetic and real datasets show that BFtS often achieves a better fairness x accuracy trade-off than existing alternatives under an adversarial missingness process.

cs.LG↗

arXiv2023

Link Prediction without Graph Neural Networks

Link prediction, which consists of predicting edges based on graph features, is a fundamental task in many graph applications. As for several related problems, Graph Neural Networks (GNNs), which are based on an attribute-centric message-passing paradigm, have become the predominant framework for link prediction. GNNs have consistently outperformed traditional topology-based heuristics, but what contributes to their performance? Are there simpler approaches that achieve comparable or better results? To answer these questions, we first identify important limitations in how GNN-based link prediction methods handle the intrinsic class imbalance of the problem -- due to the graph sparsity -- in their training and evaluation. Moreover, we propose Gelato, a novel topology-centric framework that applies a topological heuristic to a graph enhanced by attribute information via graph learning. Our model is trained end-to-end with an N-pair loss on an unbiased training set to address class imbalance. Experiments show that Gelato is 145% more accurate, trains 11 times faster, infers 6,000 times faster, and has less than half of the trainable parameters compared to state-of-the-art GNNs for link prediction.

cs.LG↗

arXiv2023

Event Detection on Dynamic Graphs

Event detection is a critical task for timely decision-making in graph analytics applications. Despite the recent progress towards deep learning on graphs, event detection on dynamic graphs presents particular challenges to existing architectures. Real-life events are often associated with sudden deviations of the normal behavior of the graph. However, existing approaches for dynamic node embedding are unable to capture the graph-level dynamics related to events. In this paper, we propose DyGED, a simple yet novel deep learning model for event detection on dynamic graphs. DyGED learns correlations between the graph macro dynamics -- i.e. a sequence of graph-level representations -- and labeled events. Moreover, our approach combines structural and temporal self-attention mechanisms to account for application-specific node and time importances effectively. Our experimental evaluation, using a representative set of datasets, demonstrates that DyGED outperforms competing solutions in terms of event detection accuracy by up to 8.5% while being more scalable than the top alternatives. We also present case studies illustrating key features of our model.

cs.LG↗

arXiv2023

Feature-based Individual Fairness in k-Clustering

Ensuring fairness in machine learning algorithms is a challenging and essential task. We consider the problem of clustering a set of points while satisfying fairness constraints. While there have been several attempts to capture group fairness in the $k$-clustering problem, fairness at an individual level is relatively less explored. We introduce a new notion of individual fairness in $k$-clustering based on features not necessarily used for clustering. We show that this problem is NP-hard and does not admit a constant factor approximation. Therefore, we design a randomized algorithm that guarantees approximation both in terms of minimizing the clustering distance objective and individual fairness under natural restrictions on the distance metric and fairness constraints. Finally, our experimental results against six competing baselines validate that our algorithm produces individually fairer clusters than the fairest baseline by 12.5% on average while also being less costly in terms of the clustering objective than the best baseline by 34.5% on average.

cs.LG↗

arXiv2022

POLE: Polarized Embedding for Signed Networks

From the 2016 U.S. presidential election to the 2021 Capitol riots to the spread of misinformation related to COVID-19, many have blamed social media for today's deeply divided society. Recent advances in machine learning for signed networks hold the promise to guide small interventions with the goal of reducing polarization in social media. However, existing models are especially ineffective in predicting conflicts (or negative links) among users. This is due to a strong correlation between link signs and the network structure, where negative links between polarized communities are too sparse to be predicted even by state-of-the-art approaches. To address this problem, we first design a partition-agnostic polarization measure for signed graphs based on the signed random-walk and show that many real-world graphs are highly polarized. Then, we propose POLE (POLarized Embedding for signed networks), a signed embedding method for polarized graphs that captures both topological and signed similarities jointly via signed autocovariance. Through extensive experiments, we show that POLE significantly outperforms state-of-the-art methods in signed link prediction, particularly for negative links with gains of up to one order of magnitude.

cs.SI↗

arXiv2021

A Broader Picture of Random-walk Based Graph Embedding

Graph embedding based on random-walks supports effective solutions for many graph-related downstream tasks. However, the abundance of embedding literature has made it increasingly difficult to compare existing methods and to identify opportunities to advance the state-of-the-art. Meanwhile, existing work has left several fundamental questions -- such as how embeddings capture different structural scales and how they should be applied for effective link prediction -- unanswered. This paper addresses these challenges with an analytical framework for random-walk based graph embedding that consists of three components: a random-walk process, a similarity function, and an embedding algorithm. Our framework not only categorizes many existing approaches but naturally motivates new ones. With it, we illustrate novel ways to incorporate embeddings at multiple scales to improve downstream task performance. We also show that embeddings based on autocovariance similarity, when paired with dot product ranking for link prediction, outperform state-of-the-art methods based on Pointwise Mutual Information similarity by up to 100%.

cs.LG↗

arXiv2020

Network Robustness via Global k-cores

Network robustness is a measure a network's ability to survive adversarial attacks. But not all parts of a network are equal. K-cores, which are dense subgraphs, are known to capture some of the key properties of many real-life networks. Therefore, previous work has attempted to model network robustness via the stability of its k-core. However, these approaches account for a single core value and thus fail to encode a global network resilience measure. In this paper, we address this limitation by proposing a novel notion of network resilience that is defined over all cores. In particular, we evaluate the stability of the network under node removals with respect to each node's initial core. Our goal is to compute robustness via a combinatorial problem: find b most critical nodes to delete such that the number of nodes that fall from their initial cores is maximized. One of our contributions is showing that it is NP-hard to achieve any polynomial factor approximation of the given objective. We also present a fine-grained complexity analysis of this problem under the lens of parameterized complexity theory for several natural parameters. Moreover, we show two applications of our notion of robustness: measuring the evolution of species and characterizing networks arising from different domains.

cs.SI↗

arXiv2020

K-Core Minimization: A Game Theoretic Approach

K-cores are maximal induced subgraphs where all vertices have degree at least k. These dense patterns have applications in community detection, network visualization and protein function prediction. However, k-cores can be quite unstable to network modifications, which motivates the question: How resilient is the k-core structure of a network, such as the Web or Facebook, to edge deletions? We investigate this question from an algorithmic perspective. More specifically, we study the problem of computing a small set of edges for which the removal minimizes the $k$-core structure of a network. This paper provides a comprehensive characterization of the hardness of the k-core minimization problem (KCM), including innaproximability and fixed-parameter intractability. Motivated by such a challenge in terms of algorithm design, we propose a novel algorithm inspired by Shapley value -- a cooperative game-theoretic concept -- that is able to leverage the strong interdependencies in the effects of edge removals in the search space. As computing Shapley values is also NP-hard, we efficiently approximate them using a randomized algorithm with probabilistic guarantees. Our experiments, using several real datasets, show that the proposed algorithm outperforms competing solutions in terms of k-core minimization while being able to handle large graphs. Moreover, we illustrate how KCM can be applied in the analysis of the k-core resilience of networks.

cs.SI↗

arXiv2019

Influence Minimization Under Budget and Matroid Constraints: Extended Version

Recently, online social networks have become major battlegrounds for political campaigns, viral marketing, and the dissemination of news. As a consequence, ''bad actors'' are increasingly exploiting these platforms, becoming a key challenge for their administrators, businesses and the society in general. The spread of fake news is a classical example of the abuse of social networks by these actors. While some have advocated for stricter policies to control the spread of misinformation in social networks, this often happens in detriment of their democratic and organic structure. In this paper we study how to limit the influence of a target set of users in a network via the removal of a few edges. The idea is to control the diffusion processes while minimizing the amount of disturbance in the network structure. We formulate the influence limitation problem in a data-driven fashion, by taking into account past propagation traces. Moreover, we consider two types of constraints over the set of edge removals, a budget constraint and also a, more general, set of matroid constraints. These problems lead to interesting challenges in terms of algorithm design. For instance, we are able to show that influence limitation is APX-hard and propose deterministic and probabilistic approximation algorithms for the budgeted and matroid version of the problem, respectively. Our experiments show that the proposed solutions outperform the baselines by up to 40%.

cs.SI↗

arXiv2017

Maximizing Coverage Centrality via Network Design: Extended Version

Network centrality plays an important role in many applications. Central nodes in social networks can be influential, driving opinions and spreading news or rumors.In hyperlinked environments, such as the Web, where users navigate via clicks, central content receives high traffic, becoming targets for advertising campaigns. While there is an extensive amount of work on centrality measures and their efficient computation, controlling nodes' centrality via network updates is a more recent and challenging problem. Performing minimal modifications to a network to achieve a desired property falls under the umbrella of network design problems. This paper is focused on improving the coverage centrality of a set of nodes, which is the number of pairs of nodes that have a shortest path passing through the set, by adding edges to the network. We prove strong inapproximability results and propose a greedy algorithm for maximizing coverage centrality. To ensure scalability to large networks, we also design an efficient sampling algorithm for the problem. In addition to providing an extensive empirical evaluation of our algorithms, we also show that, under some realistic constraints, the proposed solutions achieve almost-optimal approximation for coverage centrality maximization.

cs.SI↗