arXiv subjects

Arpan Biswas

Publications and source records attributed to Arpan Biswas.

25 records · Page 2Linked to original sources

arXiv2023

Combining Variational Autoencoders and Physical Bias for Improved Microscopy Data Analysis

Electron and scanning probe microscopy produce vast amounts of data in the form of images or hyperspectral data, such as EELS or 4D STEM, that contain information on a wide range of structural, physical, and chemical properties of materials. To extract valuable insights from these data, it is crucial to identify physically separate regions in the data, such as phases, ferroic variants, and boundaries between them. In order to derive an easily interpretable feature analysis, combining with well-defined boundaries in a principled and unsupervised manner, here we present a physics augmented machine learning method which combines the capability of Variational Autoencoders to disentangle factors of variability within the data and the physics driven loss function that seeks to minimize the total length of the discontinuities in images corresponding to latent representations. Our method is applied to various materials, including NiO-LSMO, BiFeO3, and graphene. The results demonstrate the effectiveness of our approach in extracting meaningful information from large volumes of imaging data. The fully notebook containing implementation of the code and analysis workflow is available at https://github.com/arpanbiswas52/PaperNotebooks

cs.LG↗

arXiv2023

A dynamic Bayesian optimized active recommender system for curiosity-driven Human-in-the-loop automated experiments

Optimization of experimental materials synthesis and characterization through active learning methods has been growing over the last decade, with examples ranging from measurements of diffraction on combinatorial alloys at synchrotrons, to searches through chemical space with automated synthesis robots for perovskites. In virtually all cases, the target property of interest for optimization is defined apriori with limited human feedback during operation. In contrast, here we present the development of a new type of human in the loop experimental workflow, via a Bayesian optimized active recommender system (BOARS), to shape targets on the fly, employing human feedback. We showcase examples of this framework applied to pre-acquired piezoresponse force spectroscopy of a ferroelectric thin film, and then implement this in real time on an atomic force microscope, where the optimization proceeds to find symmetric piezoresponse amplitude hysteresis loops. It is found that such features appear more affected by subsurface defects than the local domain structure. This work shows the utility of human-augmented machine learning approaches for curiosity-driven exploration of systems across experimental domains. The analysis reported here is summarized in Colab Notebook for the purpose of tutorial and application to other data: https://github.com/arpanbiswas52/varTBO

cs.LG↗

arXiv2022

Optimizing Training Trajectories in Variational Autoencoders via Latent Bayesian Optimization Approach

Unsupervised and semi-supervised ML methods such as variational autoencoders (VAE) have become widely adopted across multiple areas of physics, chemistry, and materials sciences due to their capability in disentangling representations and ability to find latent manifolds for classification and regression of complex experimental data. Like other ML problems, VAEs require hyperparameter tuning, e.g., balancing the Kullback Leibler (KL) and reconstruction terms. However, the training process and resulting manifold topology and connectivity depend not only on hyperparameters, but also their evolution during training. Because of the inefficiency of exhaustive search in a high-dimensional hyperparameter space for the expensive to train models, here we explored a latent Bayesian optimization (zBO) approach for the hyperparameter trajectory optimization for the unsupervised and semi-supervised ML and demonstrate for joint-VAE with rotational invariances. We demonstrate an application of this method for finding joint discrete and continuous rotationally invariant representations for MNIST and experimental data of a plasmonic nanoparticles material system. The performance of the proposed approach has been discussed extensively, where it allows for any high dimensional hyperparameter tuning or trajectory optimization of other ML models.

cs.LG↗

arXiv2021

A Nested Weighted Tchebycheff Multi-Objective Bayesian Optimization Approach for Flexibility of Unknown Utopia Estimation in Expensive Black-box Design Problems

We propose a nested weighted Tchebycheff Multi-objective Bayesian optimization framework where we build a regression model selection procedure from an ensemble of models, towards better estimation of the uncertain parameters of the weighted-Tchebycheff expensive black-box multi-objective function. In existing work, a weighted Tchebycheff MOBO approach has been demonstrated which attempts to estimate the unknown utopia in formulating acquisition function, through calibration using a priori selected regression model. However, the existing MOBO model lacks flexibility in selecting the appropriate regression models given the guided sampled data and therefore, can under-fit or over-fit as the iterations of the MOBO progress, reducing the overall MOBO performance. As it is too complex to a priori guarantee a best model in general, this motivates us to consider a portfolio of different families of predictive models fitted with current training data, guided by the WTB MOBO; the best model is selected following a user-defined prediction root mean-square-error-based approach. The proposed approach is implemented in optimizing a multi-modal benchmark problem and a thin tube design under constant loading of temperature-pressure, with minimizing the risk of creep-fatigue failure and design cost. Finally, the nested weighted Tchebycheff MOBO model performance is compared with different MOBO frameworks with respect to accuracy in parameter estimation, Pareto-optimal solutions and function evaluation cost. This method is generalized enough to consider different families of predictive models in the portfolio for best model selection, where the overall design architecture allows for solving any high-dimensional (multiple functions) complex black-box problems and can be extended to any other global criterion multi-objective optimization methods where prior knowledge of utopia is required.

cs.LG↗

arXiv2021

Chemical control of polarization in thin strained films of a multiaxial ferroelectric: phase diagrams and polarization rotation

The emergent behaviors in thin films of a multiaxial ferroelectric due to an electrochemical coupling between the rotating polarization and surface ions are explored within the framework of the 2-4 Landau-Ginzburg-Devonshire (LGD) thermodynamic potential combined with the Stephenson-Highland (SH) approach. The combined LGD-SH approach allows to describe the electrochemical switching and rotation of polarization vector in the multiaxial ferroelectric film covered by surface ions with a charge density dependent to the relative partial oxygen pressure. We calculate the phase diagrams and analyze the dependence of polarization components on the applied voltage, and discuss the peculiarities of quasi-static ferroelectric, dielectric and piezoelectric hysteresis loops in thin strained multiaxial ferroelectric films. The nonlinear surface screening by oxygen ions makes the diagrams very different from the known diagrams of e.g., strained BaTiO3 films. Quite unexpectedly we predict the appearance of the ferroelectric reentrant phases. Obtained results point on the possibility to control the appearance and features of ferroelectric, dielectric and piezoelectric hysteresis in multiaxial FE films covered by surface ions by varying their concentration via the partial oxygen pressure. The LGD-SH description of a multiaxial FE film can be further implemented within the Bayesian optimization framework, opening the pathway towards predictive materials optimization.

cond-mat.mtrl-sci↗

arXiv2021

Multi-objective Bayesian optimization of ferroelectric materials with interfacial control for memory and energy storage applications

Optimization of materials performance for specific applications often requires balancing multiple aspects of materials functionality. Even for the cases where generative physical model of material behavior is known and reliable, this often requires search over multidimensional parameter space to identify low-dimensional manifold corresponding to required Pareto front. Here we introduce the multi-objective Bayesian Optimization (MOBO) workflow for the ferroelectric/anti-ferroelectric performance optimization for memory and energy storage applications based on the numerical solution of the Ginzburg-Landau equation with electrochemical or semiconducting boundary conditions. MOBO is a low computational cost optimization tool for expensive multi-objective functions, where we update posterior surrogate Gaussian process models from prior evaluations, and then select future evaluations from maximizing an acquisition function. Using the parameters for a prototype bulk antiferroelectric (PbZrO3), we first develop a physics-driven decision tree of target functions from the loop structures. We further develop a physics-driven MOBO architecture to explore multidimensional parameter space and build Pareto-frontiers by maximizing two target functions jointly: energy storage and loss. This approach allows for rapid initial materials and device parameter selection for a given application and can be further expanded towards the active experiment setting. The associated notebooks provide both the tutorial on MOBO and allow to reproduce the reported analyses and apply them to other systems (https://github.com/arpanbiswas52/MOBO_AFI_Supplements).

cond-mat.mtrl-sci↗

arXiv2021

Effect of surface ionic screening on polarization reversal and phase diagrams in thin antiferroelectric films for information and energy storage

The emergent behaviors in antiferroelectric thin films due to a coupling between surface electrochemistry and intrinsic polar instabilities are explored within the framework of the modified 2-4-6 Kittel-Landau-Ginzburg-Devonshire (KLGD) thermodynamic approach. Using phenomenological parameters of the KLGD potential for a bulk antiferroelectric (PbZrO3) and a Stephenson-Highland (SH) approach, we study the role of surface ions with a charge density proportional to the relative partial oxygen pressure on the dipole states and their reversal mechanisms in the antiferroelectric thin films. The combined KLGD-SH approach allows to delineate the boundaries of antiferroelectric, ferroelectric-like antiferroionic and electret-like paraelectric states as a function of temperature, oxygen pressure, surface ions formation energy and concentration, and film thickness. This approach also allows the characterization of the polar and antipolar orderings dependence on the voltage applied to the antiferroelectric film, and the analysis of their static and dynamic hysteresis loops. The applications of the antiferroelectric films covered with surface ion layer for energy and information storage are explored.

cond-mat.mtrl-sci↗