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Asaf Ben Arie

Publications and source records attributed to Asaf Ben Arie.

3 recordsLinked to original sources

Flexible Deep Neural Networks for Partially Linear Survival Data: Estimation and Survival Inference

We propose a flexible deep neural network (DNN) framework for modeling survival data within a partially linear regression structure. The approach preserves interpretability through a parametric linear component for covariates of primary interest, while a nonparametric DNN component captures complex time-covariate interactions among nuisance variables. We refer to the method as FLEXI-Haz, a FLEXIble Hazard model with a partially linear structure. In contrast to existing DNN approaches for partially linear Cox models, FLEXI-Haz does not rely on the proportional hazards assumption. We establish theoretical guarantees: the neural network component attains minimax-optimal convergence rates over composite Hölder classes, the linear estimator is sqrt-n-consistent, asymptotically normal, and semiparametrically efficient, and we develop a cross-fitted one-step estimator of the cumulative hazard and survival function for a new subject, together with pointwise asymptotic confidence intervals. To the best of our knowledge, this is the first frequentist asymptotic pointwise inference result for a survival function in a DNN survival model, with or without a linear component. Simulations and real-data analyses demonstrate the utility of FLEXI-Haz as a principled and interpretable alternative to methods based on proportional hazards.

stat.ML

Confidence Intervals and Simultaneous Confidence Bands Based on Deep Learning

Deep learning models have significantly improved prediction accuracy in various fields, gaining recognition across numerous disciplines. Yet, an aspect of deep learning that remains insufficiently addressed is the assessment of prediction uncertainty. Producing reliable uncertainty estimators could be crucial in practical terms. For instance, predictions associated with a high degree of uncertainty could be sent for further evaluation. Recent works in uncertainty quantification of deep learning predictions, including Bayesian posterior credible intervals and a frequentist confidence-interval estimation, have proven to yield either invalid or overly conservative intervals. Furthermore, there is currently no method for quantifying uncertainty that can accommodate deep neural networks for survival (time-to-event) data that involves right-censored outcomes. In this work, we provide a valid non-parametric bootstrap method that correctly disentangles data uncertainty from the noise inherent in the adopted optimization algorithm, ensuring that the resulting point-wise confidence intervals or the simultaneous confidence bands are accurate (i.e., valid and not overly conservative). The proposed ad-hoc method can be easily integrated into any deep neural network without interfering with the training process. The utility of the proposed approach is illustrated by constructing simultaneous confidence bands for survival curves derived from deep neural networks for survival data with right censoring.

stat.ML

Marginalized Frailty-Based Illness-Death Model: Application to the UK-Biobank Survival Data

The UK Biobank is a large-scale health resource comprising genetic, environmental and medical information on approximately 500,000 volunteer participants in the UK, recruited at ages 40--69 during the years 2006--2010. The project monitors the health and well-being of its participants. This work demonstrates how these data can be used to estimate in a semi-parametric fashion the effects of genetic and environmental risk factors on the hazard functions of various diseases, such as colorectal cancer. An illness-death model is adopted, which inherently is a semi-competing risks model, since death can censor the disease, but not vice versa. Using a shared-frailty approach to account for the dependence between time to disease diagnosis and time to death, we provide a new illness-death model that assumes Cox models for the marginal hazard functions. The recruitment procedure used in this study introduces delayed entry to the data. An additional challenge arising from the recruitment procedure is that information coming from both prevalent and incident cases must be aggregated. Lastly, we do not observe any deaths prior to the minimal recruitment age, 40. In this work we provide an estimation procedure for our new illness-death model that overcomes all the above challenges.

stat.AP