arXiv subjects

Ashish Sharma

Publications and source records attributed to Ashish Sharma.

29 records · Page 2Linked to original sources

arXiv2020

A Computational Approach to Understanding Empathy Expressed in Text-Based Mental Health Support

Empathy is critical to successful mental health support. Empathy measurement has predominantly occurred in synchronous, face-to-face settings, and may not translate to asynchronous, text-based contexts. Because millions of people use text-based platforms for mental health support, understanding empathy in these contexts is crucial. In this work, we present a computational approach to understanding how empathy is expressed in online mental health platforms. We develop a novel unifying theoretically-grounded framework for characterizing the communication of empathy in text-based conversations. We collect and share a corpus of 10k (post, response) pairs annotated using this empathy framework with supporting evidence for annotations (rationales). We develop a multi-task RoBERTa-based bi-encoder model for identifying empathy in conversations and extracting rationales underlying its predictions. Experiments demonstrate that our approach can effectively identify empathic conversations. We further apply this model to analyze 235k mental health interactions and show that users do not self-learn empathy over time, revealing opportunities for empathy training and feedback.

cs.CL↗

arXiv2020

A DICOM Framework for Machine Learning Pipelines against Real-Time Radiology Images

Executing machine learning (ML) pipelines in real-time on radiology images is hard due to the limited computing resources in clinical environments and the lack of efficient data transfer capabilities to run them on research clusters. We propose Niffler, an integrated framework that enables the execution of ML pipelines at research clusters by efficiently querying and retrieving radiology images from the Picture Archiving and Communication Systems (PACS) of the hospitals. Niffler uses the Digital Imaging and Communications in Medicine (DICOM) protocol to fetch and store imaging data and provides metadata extraction capabilities and Application programming interfaces (APIs) to apply filters on the images. Niffler further enables the sharing of the outcomes from the ML pipelines in a de-identified manner. Niffler has been running stable for more than 19 months and has supported several research projects at the department. In this paper, we present its architecture and three of its use cases: an inferior vena cava (IVC) filter detection from the images in real-time, identification of scanner utilization, and scanner clock calibration. Evaluations on the Niffler prototype highlight its feasibility and efficiency in facilitating the ML pipelines on the images and metadata in real-time and retrospectively.

eess.IV↗

arXiv2020

Embedding-based Retrieval in Facebook Search

Search in social networks such as Facebook poses different challenges than in classical web search: besides the query text, it is important to take into account the searcher's context to provide relevant results. Their social graph is an integral part of this context and is a unique aspect of Facebook search. While embedding-based retrieval (EBR) has been applied in eb search engines for years, Facebook search was still mainly based on a Boolean matching model. In this paper, we discuss the techniques for applying EBR to a Facebook Search system. We introduce the unified embedding framework developed to model semantic embeddings for personalized search, and the system to serve embedding-based retrieval in a typical search system based on an inverted index. We discuss various tricks and experiences on end-to-end optimization of the whole system, including ANN parameter tuning and full-stack optimization. Finally, we present our progress on two selected advanced topics about modeling. We evaluated EBR on verticals for Facebook Search with significant metrics gains observed in online A/B experiments. We believe this paper will provide useful insights and experiences to help people on developing embedding-based retrieval systems in search engines.

cs.IR↗

arXiv2020

Searching for cosmological gravitational-wave backgrounds with third-generation detectors in the presence of an astrophysical foreground

The stochastic cosmological gravitational-wave background (CGWB) provides a direct window to study early universe phenomena and fundamental physics. With the proposed third-generation ground-based gravitational wave detectors, Einstein Telescope (ET) and Cosmic Explorer (CE), we might be able to detect evidence of a CGWB. However, to dig out these prime signals would be a difficult quest as the dominance of the astrophysical foreground from compact-binary coalescence (CBC) will mask this CGWB. In this paper, we study a subtraction-noise projection method, making it possible to reduce the residuals left after subtraction of the astrophysical foreground of CBCs, greatly improving our chances to detect a cosmological background. We carried out our analysis based on simulations of ET and CE and using posterior sampling for the parameter estimation of binary black-hole mergers. We demonstrate the sensitivity improvement of stochastic gravitational-wave searches and conclude that the ultimate sensitivity of these searches will not be limited by residuals left when subtracting the estimated BBH foreground, but by the fraction of the astrophysical foreground that cannot be detected even with third-generation instruments, or possibly by other signals not included in our analysis. We also resolve previous misconceptions of residual noise in the context of Gaussian parameter estimation.

gr-qc↗

arXiv2020

Engagement Patterns of Peer-to-Peer Interactions on Mental Health Platforms

Mental illness is a global health problem, but access to mental healthcare resources remain poor worldwide. Online peer-to-peer support platforms attempt to alleviate this fundamental gap by enabling those who struggle with mental illness to provide and receive social support from their peers. However, successful social support requires users to engage with each other and failures may have serious consequences for users in need. Our understanding of engagement patterns on mental health platforms is limited but critical to inform the role, limitations, and design of these platforms. Here, we present a large-scale analysis of engagement patterns of 35 million posts on two popular online mental health platforms, TalkLife and Reddit. Leveraging communication models in human-computer interaction and communication theory, we operationalize a set of four engagement indicators based on attention and interaction. We then propose a generative model to jointly model these indicators of engagement, the output of which is synthesized into a novel set of eleven distinct, interpretable patterns. We demonstrate that this framework of engagement patterns enables informative evaluations and analysis of online support platforms. Specifically, we find that mutual back-and-forth interactions are associated with significantly higher user retention rates on TalkLife. Such back-and-forth interactions, in turn, are associated with early response times and the sentiment of posts.

cs.SI↗

arXiv2020

Utilizing Automated Breast Cancer Detection to Identify Spatial Distributions of Tumor Infiltrating Lymphocytes in Invasive Breast Cancer

Quantitative assessment of Tumor-TIL spatial relationships is increasingly important in both basic science and clinical aspects of breast cancer research. We have developed and evaluated convolutional neural network (CNN) analysis pipelines to generate combined maps of cancer regions and tumor infiltrating lymphocytes (TILs) in routine diagnostic breast cancer whole slide tissue images (WSIs). We produce interactive whole slide maps that provide 1) insight about the structural patterns and spatial distribution of lymphocytic infiltrates and 2) facilitate improved quantification of TILs. We evaluated both tumor and TIL analyses using three CNN networks - Resnet-34, VGG16 and Inception v4, and demonstrated that the results compared favorably to those obtained by what believe are the best published methods. We have produced open-source tools and generated a public dataset consisting of tumor/TIL maps for 1,015 TCGA breast cancer images. We also present a customized web-based interface that enables easy visualization and interactive exploration of high-resolution combined Tumor-TIL maps for 1,015TCGA invasive breast cancer cases that can be downloaded for further downstream analyses.

eess.IV↗

arXiv2019

Data Services with Bindaas: RESTful Interfaces for Diverse Data Sources

The diversity of data management systems affords developers the luxury of building systems with heterogeneous systems that address needs that are unique to the data. It allows one to mix-n-match systems that can store, query, update, and process data, based on specific use cases. However, this heterogeneity brings with it the burden of developing custom interfaces for each data management system. Developers are required to build high-performance APIs for data access while adopting best-practices governing security, data privacy, and access control. These include user authentication, data authorization, role-based access control, and audit mechanisms to avoid compromising the security standards mandated by data providers. In this paper, we present Bindaas, a secure, extensible big data middleware that offers uniform access to diverse data sources. By providing a standard RESTful web service interface to the data sources, Bindaas exposes query, update, store, and delete functionality of the data sources as data service APIs, while providing turn-key support for standard operations involving security, access control, and audit-trails. Bindaas consists of optional features, such as query and response modifiers as well as plugins that implement composable and reusable data operations on the data. The research community has deployed Bindaas in various production environments in healthcare. Our evaluations highlight the efficiency of Bindaas in serving concurrent requests to data source instances. We further observe that the overheads caused by Bindaas on the data sources are negligible.

cs.DB↗

arXiv2019

DeepAISE -- An End-to-End Development and Deployment of a Recurrent Neural Survival Model for Early Prediction of Sepsis

Sepsis, a dysregulated immune system response to infection, is among the leading causes of morbidity, mortality, and cost overruns in the Intensive Care Unit (ICU). Early prediction of sepsis can improve situational awareness amongst clinicians and facilitate timely, protective interventions. While the application of predictive analytics in ICU patients has shown early promising results, much of the work has been encumbered by high false-alarm rates. Efforts to improve specificity have been limited by several factors, most notably the difficulty of labeling sepsis onset time and the low prevalence of septic-events in the ICU. Here, we present DeepAISE (Deep Artificial Intelligence Sepsis Expert), a recurrent neural survival model for the early prediction of sepsis. We show that by coupling a clinical criterion for defining sepsis onset time with a treatment policy (e.g., initiation of antibiotics within one hour of meeting the criterion), one may rank the relative utility of various criteria through offline policy evaluation. Given the optimal criterion, DeepAISE automatically learns predictive features related to higher-order interactions and temporal patterns among clinical risk factors that maximize the data likelihood of observed time to septic events. DeepAISE has been incorporated into a clinical workflow, which provides real-time hourly sepsis risk scores. A comparative study of four baseline models indicates that DeepAISE produces the most accurate predictions (AUC=0.90 and 0.87) and the lowest false alarm rates (FAR=0.20 and 0.26) in two separate cohorts (internal and external, respectively), while simultaneously producing interpretable representations of the clinical time series and risk factors.

cs.LG↗

arXiv2019

Improving Latent User Models in Online Social Media

Modern social platforms are characterized by the presence of rich user-behavior data associated with the publication, sharing and consumption of textual content. Users interact with content and with each other in a complex and dynamic social environment while simultaneously evolving over time. In order to effectively characterize users and predict their future behavior in such a setting, it is necessary to overcome several challenges. Content heterogeneity and temporal inconsistency of behavior data result in severe sparsity at the user level. In this paper, we propose a novel mutual-enhancement framework to simultaneously partition and learn latent activity profiles of users. We propose a flexible user partitioning approach to effectively discover rare behaviors and tackle user-level sparsity. We extensively evaluate the proposed framework on massive datasets from real-world platforms including Q&A networks and interactive online courses (MOOCs). Our results indicate significant gains over state-of-the-art behavior models ( 15% avg ) in a varied range of tasks and our gains are further magnified for users with limited interaction data. The proposed algorithms are amenable to parallelization, scale linearly in the size of datasets, and provide flexibility to model diverse facets of user behavior.

cs.SI↗

arXiv2018

On-Demand Big Data Integration: A Hybrid ETL Approach for Reproducible Scientific Research

Scientific research requires access, analysis, and sharing of data that is distributed across various heterogeneous data sources at the scale of the Internet. An eager ETL process constructs an integrated data repository as its first step, integrating and loading data in its entirety from the data sources. The bootstrapping of this process is not efficient for scientific research that requires access to data from very large and typically numerous distributed data sources. a lazy ETL process loads only the metadata, but still eagerly. Lazy ETL is faster in bootstrapping. However, queries on the integrated data repository of eager ETL perform faster, due to the availability of the entire data beforehand. In this paper, we propose a novel ETL approach for scientific data integration, as a hybrid of eager and lazy ETL approaches, and applied both to data as well as metadata. This way, Hybrid ETL supports incremental integration and loading of metadata and data from the data sources. We incorporate a human-in-the-loop approach, to enhance the hybrid ETL, with selective data integration driven by the user queries and sharing of integrated data between users. We implement our hybrid ETL approach in a prototype platform, Obidos, and evaluate it in the context of data sharing for medical research. Obidos outperforms both the eager ETL and lazy ETL approaches, for scientific research data integration and sharing, through its selective loading of data and metadata, while storing the integrated data in a scalable integrated data repository.

cs.DB↗

arXiv2010

A Complexity measure based on Requirement Engineering Document

Research shows, that the major issue in development of quality software is precise estimation. Further this estimation depends upon the degree of intricacy inherent in the software i.e. complexity. This paper attempts to empirically demonstrate the proposed complexity which is based on IEEE Requirement Engineering document. It is said that a high quality SRS is pre requisite for high quality software. Requirement Engineering document (SRS) is a specification for a particular software product, program or set of program that performs some certain functions for a specific environment. The various complexity measure given so far are based on Code and Cognitive metrics value of software, which are code based. So these metrics provide no leverage to the developer of the code. Considering the shortcoming of code based approaches, the proposed approach identifies complexity of software immediately after freezing the requirement in SDLC process. The proposed complexity measure compares well with established complexity measures. Finally the trend can be validated with the result of proposed measure. Ultimately, Requirement based complexity measure can be used to understand the complexity of proposed software much before the actual implementation of design thus saving on cost and manpower wastage.

cs.SE↗