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Ashkan Roozbeh

Publications and source records attributed to Ashkan Roozbeh.

3 recordsLinked to original sources

Time-domain THz spectroscopy reveals coupled protein-hydration dielectric response in solutions of native and fibrils of human lyso-zyme

Here we reveal details of the interaction between human lysozyme proteins, both native and fibrils, and their water environment by intense terahertz time domain spectroscopy. With the aid of a rigorous dielectric model, we determine the amplitude and phase of the oscillating dipole induced by the THz field in the volume containing the protein and its hydration water. At low concentrations, the amplitude of this induced dipolar response decreases with increasing concentration. Beyond a certain threshold, marking the onset of the interactions between the extended hydration shells, the amplitude remains fixed but the phase of the induced dipolar response, which is initially in phase with the applied THz field, begins to change. The changes observed in the THz response reveal protein-protein interactions me-diated by extended hydration layers, which may control fibril formation and may have an important role in chemical recognition phenomena.

physics.bio-ph

Vibronic resonances facilitate excited state coherence in light harvesting proteins at room temperature

Until recently it was believed that photosynthesis, a fundamental process for life on earth, could be fully understood with semi-classical models. However, puzzling quantum phenomena have been observed in several photosynthetic pigment-protein complexes, prompting questions regarding the nature and role of these effects. Recent attention has focused on discrete vibrational modes that are resonant or quasi-resonant with excitonic energy splittings and strongly coupled to these excitonic states. Here we unambiguously identify excited state coherent superpositions in photosynthetic light-harvesting complexes using a new experimental approach. Decoherence on the timescale of the excited state lifetime allows low energy (56 cm-1) oscillations on the signal intensity to be observed. In conjunction with an appropriate model, these oscillations provide clear and direct experimental evidence that the persistent coherences observed require strong vibronic mixing among excited states.

physics.bio-ph

Electromagnetic wave propagation through inhomogeneous material layers

We use Maxwell's equations in a sourceless, inhomogeneous medium with continuous permeability $μ(\mathbf{r}) $ and permittivity $% ε(\mathbf{r}) $ to study the wave propagation. The general form of the wave equation is derived and by virtue of some physical assumptions, including $μ$ and $ε$ as functions of $z,$ the equation has been simplified. Finally by introducing a smooth step dielectric variable we solve the wave equation in the corresponding medium which is in conform with the well known results. Exact double-layer solution in analytic form has been given in terms of the Heun functions.

physics.gen-ph