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Atalie C. Thompson

Publications and source records attributed to Atalie C. Thompson.

2 recordsLinked to original sources

OCT-FedSIR: Toward Trustworthy Federated Ophthalmic Learning under Annotation Noise

Federated learning enables collaborative model development without centralizing patient data, but annotation reliability at participating institutions cannot always be assumed. In ophthalmic imaging, differences in disease prevalence and class composition can resemble changes caused by corrupted supervision. We introduce OCT-FedSIR, a reliability-aware spectral framework for federated OCT classification under client-dependent annotation noise and heterogeneous data distributions. OCT-FedSIR combines class-balanced spectral estimation, Stage-I logit adjustment, complementary spectral descriptors, selective spectral relabeling, and noise-aware federated optimization. We evaluated the framework on the Kermany, University of Illinois Chicago, and Wake Forest datasets under symmetric and structured asymmetric noise and three levels of non-IID heterogeneity. Across 117 experimental conditions, OCT-FedSIR achieved a mean accuracy of 86.73%, compared with 79.94% for RoFL and 78.75% for FedCorr. It correctly separated clients with original and corrupted annotations across all evaluated conditions, while the original FedSIR identification procedure was less robust, particularly under asymmetric noise. Spectral relabeling recovered 77.2% of corrupted annotations with 91.3% correction precision and a 3.5% false-correction rate. Retaining corrected clients outperformed spectral pruning by 9.30 percentage points on average. These findings show that annotation noise can often be identified and corrected without discarding informative client data.

cs.LG

From Machine to Machine: An OCT-trained Deep Learning Algorithm for Objective Quantification of Glaucomatous Damage in Fundus Photographs

Previous approaches using deep learning algorithms to classify glaucomatous damage on fundus photographs have been limited by the requirement for human labeling of a reference training set. We propose a new approach using spectral-domain optical coherence tomography (SDOCT) data to train a deep learning algorithm to quantify glaucomatous structural damage on optic disc photographs. The dataset included 32,820 pairs of optic disc photos and SDOCT retinal nerve fiber layer (RNFL) scans from 2,312 eyes of 1,198 subjects. A deep learning convolutional neural network was trained to assess optic disc photographs and predict SDOCT average RNFL thickness. The performance of the algorithm was evaluated in an independent test sample. The mean prediction of average RNFL thickness from all 6,292 optic disc photos in the test set was 83.3$\pm$14.5 $μ$m, whereas the mean average RNFL thickness from all corresponding SDOCT scans was 82.5$\pm$16.8 $μ$m (P = 0.164). There was a very strong correlation between predicted and observed RNFL thickness values (r = 0.832; P<0.001), with mean absolute error of the predictions of 7.39 $μ$m. The areas under the receiver operating characteristic curves for discriminating glaucoma from healthy eyes with the deep learning predictions and actual SDOCT measurements were 0.944 (95$\%$ CI: 0.912- 0.966) and 0.940 (95$\%$ CI: 0.902 - 0.966), respectively (P = 0.724). In conclusion, we introduced a novel deep learning approach to assess optic disc photographs and provide quantitative information about the amount of neural damage. This approach could potentially be used to diagnose and stage glaucomatous damage from optic disc photographs.

cs.CV