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Augustine Wigle

Publications and source records attributed to Augustine Wigle.

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Creating treatment and component hierarchies in component network meta-analysis

Component network meta-analysis (CNMA) is a statistical methodology that enables estimation of relative effects for multi-component treatments, such as combinations of antidepressants, and individual components, such as single antidepressants, by synthesizing data from multiple studies. A commonly desired output of a systematic review and meta-analysis is a hierarchy of the treatments in terms of a certain performance metric. Methods have been established for standard network meta-analysis (NMA), but have not yet been extended to CNMA. In particular, CNMA presents unique challenges because the set of relative effects that can be uniquely estimated is more complex to determine compared to standard NMA, and a hierarchy involving relative effects that are not uniquely estimable is misleading. We present a step-by-step workflow for answering treatment hierarchy questions in both frequentist and Bayesian CNMA, including explicitly identifying the uniquely estimable relative effects. We illustrate the workflow by posing multiple treatment hierarchy questions in two distinct networks, one concerning primary care of depression and one disconnected network investigating treatment for chronic lymphocytic leukemia.

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Doubly-Robust Bayesian Estimation of Optimal Individualized Treatment Rules using Network Meta-Analysis

An optimal individualized treatment rule (ITR) is a function that takes a patient's characteristics, such as demographics, biomarkers, and treatment history, and outputs a treatment that is expected to give the best outcome for that patient. Major Depressive Disorder (MDD) is a common and disabling mental health condition for which an optimal ITR is of interest. Unfortunately, the power to detect treatment-covariate interactions in individual studies of MDD treatments is low. Additionally, all treatments of interest are not compared head-to-head in a single study. Network meta-analysis (NMA) is a method of synthesizing data from multiple studies to estimate the relative effects of a set of treatments. Recently, two-stage ITR NMA was proposed as a method to estimate ITRs that has the potential to improve power and simultaneously consider all relevant treatment options. In the first stage, study-specific ITRs are estimated, and in the second stage, they are pooled using a Bayesian NMA model. The existing approach is vulnerable to model misspecification and fails to address missing outcomes, which occur in the MDD data. We overcome these challenges by proposing Bayesian Bootstrap dynamic Weighted Ordinary Least Squares (BBdWOLS), a doubly-robust approach to ITR estimation that accounts for missing at random outcomes and naturally quantifies the uncertainty in estimation. We also propose an improvement to the NMA model that incorporates the full variance-covariance matrix of study-specific estimates. In a simulation study, we show that our fully Bayesian ITR NMA method is more robust and efficient than the existing approach. We apply our method to the motivating dataset consisting of three studies of pharmacological treatments for MDD, and explore how ITR NMA results can support personalized decision making in this context.

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Personalized Treatment Hierarchies in Bayesian Network Meta-Analysis

Network Meta-Analysis (NMA) is an increasingly popular evidence synthesis tool that can provide a ranking of competing treatments, also known as a treatment hierarchy. Treatment-Covariate Interactions (TCIs) can be included in NMA models to allow relative treatment effects to vary with covariate values. We show that in an NMA model that includes TCIs, treatment hierarchies should be created with a particular covariate profile in mind. We outline the typical approach for creating a treatment hierarchy in standard Bayesian NMA and show how a treatment hierarchy for a particular covariate profile can be created from an NMA model that estimates TCIs. We demonstrate our methods using a real network of studies for treatments of major depressive disorder.

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Bayesian unanchored additive models for component network meta-analysis

Component network meta-analysis (CNMA) models are an extension of standard network meta-analysis (NMA) models which account for the use of multicomponent treatments in the network. This article contributes innovatively to several statistical aspects of CNMA. First, by introducing a unified notation, we establish that currently available methods differ in the way they assume additivity, an important distinction that has been overlooked so far in the literature. In particular, one model uses a more restrictive form of additivity than the other which we term an anchored and unanchored model, respectively. We show that an anchored model can provide a poor fit to the data if it is misspecified. Second, given that Bayesian models are often preferred by practitioners, we develop two novel unanchored Bayesian CNMA models presented under the unified notation. An extensive simulation study examining bias, coverage probabilities, and treatment rankings confirms the favorable performance of the novel models. This is the first simulation study to compare the statistical properties of CNMA models in the literature. Finally, the use of our novel models is demonstrated on a real dataset, and the results of CNMA models on the dataset are compared.

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Precision of Treatment Hierarchy: A Metric for Quantifying Certainty in Treatment Hierarchies from Network Meta-Analysis

Network meta-analysis (NMA) is an extension of pairwise meta-analysis which facilitates the estimation of relative effects for multiple competing treatments. A hierarchy of treatments is a useful output of an NMA. Treatment hierarchies are produced using ranking metrics. Common ranking metrics include the Surface Under the Cumulative RAnking curve (SUCRA) and P-scores, which are the frequentist analogue to SUCRAs. Both metrics consider the size and uncertainty of the estimated treatment effects, with larger values indicating a more preferred treatment. Although SUCRAs and P-scores themselves consider uncertainty, treatment hierarchies produced by these ranking metrics are typically reported without a measure of certainty, which might be misleading to practitioners. We propose a new metric, Precision of Treatment Hierarchy (POTH), which quantifies the certainty in producing a treatment hierarchy from SUCRAs or P-scores. The metric connects three statistical quantities: The variance of the SUCRA values, the variance of the mean rank of each treatment, and the average variance of the distribution of individual ranks for each treatment. POTH provides a single, interpretable value which quantifies the degree of certainty in producing a treatment hierarchy. We show how the metric can be adapted to apply to subsets of treatments in a network, for example, to quantify the certainty in the hierarchy of the top three treatments. We calculate POTH for a database of NMAs to investigate its empirical properties, and we demonstrate its use on three published networks.

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Estimating Methane Emissions from the Upstream Oil and Gas Industry Using a Multi-Stage Framework

Measurement-based methane inventories, which involve surveying oil and gas facilities and compiling data to estimate methane emissions, are becoming the gold standard for quantifying emissions. However, there is a current lack of statistical guidance for the design and analysis of such surveys. The only existing method is a Monte Carlo procedure which is difficult to interpret, computationally intensive, and lacks available open-source code for its implementation. We provide an alternative method by framing methane surveys in the context of multi-stage sampling designs. We contribute estimators of the total emissions along with variance estimators which do not require simulation, as well as stratum-level total estimators. We show that the variance contribution from each stage of sampling can be estimated to inform the design of future surveys. We also introduce a more efficient modification of the estimator. Finally, we propose combining the multi-stage approach with a simple Monte Carlo procedure to model measurement error. The resulting methods are interpretable and require minimal computational resources. We apply the methods to aerial survey data of oil and gas facilities in British Columbia, Canada, to estimate the methane emissions in the province. An R package is provided to facilitate the use of the methods.

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