arXiv subjects

Aydin Buluç

Publications and source records attributed to Aydin Buluç.

4 recordsLinked to original sources

arXiv2024

Distributed-Memory Randomized Algorithms for Sparse Tensor CP Decomposition

Candecomp / PARAFAC (CP) decomposition, a generalization of the matrix singular value decomposition to higher-dimensional tensors, is a popular tool for analyzing multidimensional sparse data. On tensors with billions of nonzero entries, computing a CP decomposition is a computationally intensive task. We propose the first distributed-memory implementations of two randomized CP decomposition algorithms, CP-ARLS-LEV and STS-CP, that offer nearly an order-of-magnitude speedup at high decomposition ranks over well-tuned non-randomized decomposition packages. Both algorithms rely on leverage score sampling and enjoy strong theoretical guarantees, each with varying time and accuracy tradeoffs. We tailor the communication schedule for our random sampling algorithms, eliminating expensive reduction collectives and forcing communication costs to scale with the random sample count. Finally, we optimize the local storage format for our methods, switching between analogues of compressed sparse column and compressed sparse row formats. Experiments show that our methods are fast and scalable, producing 11x speedup over SPLATT by decomposing the billion-scale Reddit tensor on 512 CPU cores in under two minutes.

math.NA↗

arXiv2022

Distributed-Memory Sparse Kernels for Machine Learning

Sampled Dense Times Dense Matrix Multiplication (SDDMM) and Sparse Times Dense Matrix Multiplication (SpMM) appear in diverse settings, such as collaborative filtering, document clustering, and graph embedding. Frequently, the SDDMM output becomes the input sparse matrix for a subsequent SpMM operation. Existing work has focused on shared memory parallelization of these primitives. While there has been extensive analysis of communication-minimizing distributed 1.5D algorithms for SpMM, no such analysis exists for SDDMM or the back-to-back sequence of SDDMM and SpMM, termed FusedMM. We show that distributed memory 1.5D and 2.5D algorithms for SpMM can be converted to algorithms for SDDMM with identical communication costs and input / output data layouts. Further, we give two communication-eliding strategies to reduce costs further for FusedMM kernels: either reusing the replication of an input dense matrix for the SDDMM and SpMM in sequence, or fusing the local SDDMM and SpMM kernels. We benchmark FusedMM algorithms on Cori, a Cray XC40 at LBNL, using Erdos-Renyi random matrices and large real-world sparse matrices. On 256 nodes with 68 cores each, 1.5D FusedMM algorithms using either communication eliding approach can save at least 30% of time spent exclusively in communication compared to executing a distributed-memory SpMM and SDDMM kernel in sequence. On real-world matrices with hundreds of millions of edges, all of our algorithms exhibit at least a 10x speedup over the SpMM algorithm in PETSc. On these matrices, our communication-eliding techniques exhibit runtimes up to 1.6 times faster than an unoptimized sequence of SDDMM and SpMM. We embed and test the scaling of our algorithms in real-world applications, including collaborative filtering via alternating-least-squares and inference for attention-based graph neural networks.

cs.DC↗

arXiv2021

Parallel Algorithms for Adding a Collection of Sparse Matrices

We develop a family of parallel algorithms for the SpKAdd operation that adds a collection of k sparse matrices. SpKAdd is a much needed operation in many applications including distributed memory sparse matrix-matrix multiplication (SpGEMM), streaming accumulations of graphs, and algorithmic sparsification of the gradient updates in deep learning. While adding two sparse matrices is a common operation in Matlab, Python, Intel MKL, and various GraphBLAS libraries, these implementations do not perform well when adding a large collection of sparse matrices. We develop a series of algorithms using tree merging, heap, sparse accumulator, hash table, and sliding hash table data structures. Among them, hash-based algorithms attain the theoretical lower bounds both on the computational and I/O complexities and perform the best in practice. The newly-developed hash SpKAdd makes the computation of a distributed-memory SpGEMM algorithm at least 2x faster than that the previous state-of-the-art algorithms.

cs.DC↗

arXiv2020

Communication-Avoiding and Memory-Constrained Sparse Matrix-Matrix Multiplication at Extreme Scale

Sparse matrix-matrix multiplication (SpGEMM) is a widely used kernel in various graph, scientific computing and machine learning algorithms. In this paper, we consider SpGEMMs performed on hundreds of thousands of processors generating trillions of nonzeros in the output matrix. Distributed SpGEMM at this extreme scale faces two key challenges: (1) high communication cost and (2) inadequate memory to generate the output. We address these challenges with an integrated communication-avoiding and memory-constrained SpGEMM algorithm that scales to 262,144 cores (more than 1 million hardware threads) and can multiply sparse matrices of any size as long as inputs and a fraction of output fit in the aggregated memory. As we go from 16,384 cores to 262,144 cores on a Cray XC40 supercomputer, the new SpGEMM algorithm runs 10x faster when multiplying large-scale protein-similarity matrices.

cs.DC↗