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Ayse Humeyra Bilge

Publications and source records attributed to Ayse Humeyra Bilge.

At least 19 recordsLinked to original sources

A coordinate-free approach to obtaining exact solutions in general relativity: The Newman-Unti-Tamburino solution revisited

The Newman-Unti-Tamburino (NUT) solution is characterized as the unique Petrov Type $D$ vacuum metric such that the two double principal null directions form an integrable distribution. The uniqueness of the NUT is established by evaluating the integrability conditions of the Newman-Penrose equations up to $SL(2,\mathbb{C})$ transformations, resulting in a coordinate-free characterization of the solution.

gr-qc↗

What Can We Estimate from Fatality and Infectious Case Data using the Susceptible-Infected-Removed (SIR) model? A case Study of Covid-19 Pandemic

The rapidly spreading Covid-19 that affected almost all countries, was first reported at the end of 2019. As a consequence of its highly infectious nature, countries all over the world have imposed extremely strict measures to control its spread. Since the earliest stages of this major pandemic, academics have done a huge amount of research in order to understand the disease, develop medication, vaccines and tests, and model its spread. Among these studies, a great deal of effort has been invested in the estimation of epidemic parameters in the early stage, for the countries affected by Covid-19, hence to predict the course of the epidemic but the variability of the controls over the course of the epidemic complicated the modeling processes. In this article, the determination of the basic reproduction number, the mean duration of the infectious period, the estimation of the timing of the peak of the epidemic wave is discussed using early phase data. Daily case reports and daily fatalities for ten countries over the period January 22, 2020 - April 18, 2020 are evaluated using the Susceptible-Infected-Removed (SIR) model. For each country, the SIR models fitting cumulative infective case data within 5% error are analysed. It is observed that the basic reproduction number and the mean duration of the infectious period can be estimated only in cases where the spread of the epidemic is over (for China and South Korea in the present case). Nevertheless, it is shown that the timing of the maximum and timings of the inflection points of the proportion of infected individuals can be robustly estimated from the normalized data. The validation of the estimates by comparing the predictions with actual data has shown that the predictions were realised for all countries except USA, as long as lock-down measures were retained.

q-bio.PE↗

A New Susceptible-Infectious (SI) Model With Endemic Equilibrium

The focus of this article is on the dynamics of a new susceptible-infected model which consists of a susceptible group ($S$) and two different infectious groups ($I_1$ and $I_2$). Once infected, an individual becomes a member of one of these infectious groups which have different clinical forms of infection. In addition, during the progress of the illness, an infected individual in group $I_1$ may pass to the infectious group $I_2$ which has a higher mortality rate. In this study, positiveness of the solutions for the model is proved. Stability analysis of species extinction, $I_1$-free equilibrium and endemic equilibrium as well as disease-free equilibrium is studied. Relation between the basic reproduction number of the disease and the basic reproduction number of each infectious stage is examined. The model is investigated under a specific condition and its exact solution is obtained.

q-bio.PE↗

Matrix Invariants of Finite Metric Spaces

Finite metric spaces are characterized by a polyhedral cone defined in terms of the positivity of the distance functions and the triangle inequalities. Their classification is based on the decomposition of an associated polyhedral cone, called the "metric fan". The complete classification of $n$-point metric spaces is available only for $n\le 6$. As the number of classes increases rapidly with the number of elements, it is desirable to have coarser equivalence class decompositions based on certain invariants of finite metric spaces. If $(X,d)$ is a finite metric space with elements $P_i$ and with distance functions $d_{ij}$, the Gromov product at $P_i$ is defined as $Δ_{ijk}=1/2(d_{ij}+d_{ik}-d_{jk})$. Assuming that the set of Gromov product at $P_i$ has a unique smallest element $Δ_{ijk}$, the association of the edge $P_jP_k$ to $P_i$ defines the "Gromov product structure". The "pendant-free" reduction of the finite metric space is the graph obtained by removing the edges $P_jP_k$ corresponding to the minimal Gromov products $Δ_{ijk}$ at $P_i$. In the present work, we define a matrix representation for a Gromov product structure $S$ on an $n$-point metric space, by $n\times n$ matrix $G_S$. We prove that if two metric spaces have Gromov product structures that can be mapped to each other by a permutation of the indices, then their matrices are similar via the corresponding permutation matrix. Matrix invariants of $G_S$ are used to define subclasses of Gromov product structures and their application to $n=5$ and $n=6$-point spaces are given.

math.CO↗

Forecasting Models for Daily Natural Gas Consumption Considering Periodic Variations and Demand Segregation

Due to expensive infrastructure and the difficulties in storage, supply conditions of natural gas are different from those of other traditional energy sources like petroleum or coal. To overcome these challenges, supplier countries require take-or-pay agreements for requested natural gas quantities. These contracts have many pre-clauses; if they are not met due to low/high consumption or other external factors, buyers must completely fulfill them. A similar contract is then imposed on distributors and wholesale consumers. It is thus important for all parties to forecast their daily, monthly, and annual natural gas demand to minimize their risk. In this paper, a model consisting of a modulated expansion in Fourier series, supplemented by deviations from comfortable temperatures as a regressor is proposed for the forecast of monthly and weekly consumption over a one-year horizon. This model is supplemented by a day-ahead feedback mechanism for the forecast of daily consumption. The method is applied to the study of natural gas consumption for major residential areas in Turkey, on a yearly, monthly, weekly, and daily basis. It is shown that residential heating dominates winter consumption and masks all other variations. On the other hand, weekend and holiday effects are visible in summer consumption and provide an estimate for residential and industrial use. The advantage of the proposed method is the capability of long term projections and to outperform time series methods.

q-fin.GN↗

Unexpected parameter ranges of the 2009 A(H1N1) epidemic for Istanbul and the Netherlands

The data of the 2009 A(H1N1) epidemic in Istanbul, Turkey is unique in terms of the collected data, which include not only the hospitalization but also the fatality information recorded during the pandemic. The analysis of this data displayed an unexpected time shift between the hospital referrals and fatalities. This time shift, which does not conform to the SIR and SEIR models, was explained by multi-stage SIR and SEIR models [21]. In this study we prove that the delay for these models is half of the infectious period within a quadratic approximation, and we determine the epidemic parameters $R_0$, $T$ and $I_0$ of the 2009 A(H1N1) Istanbul and Netherlands epidemics.These epidemic parameters were estimated by comparing the normalized cumulative fatality data with the solutions of the SIR model. Two different error criteria, the $L_2$ norms of the error over the whole observation period and over the initial portion of the data, were used in order to obtain the best-fitting models. It was observed that, with respect to both criteria, the parameters of "good" models were agglomerated along a line in the $T$-$R_0$ plane, instead of being scattered uniformly around a "best" model. As this fact indicates the existence of a nearly invariant quantity, interval estimates for the parameters were given. As the initial phase of the epidemics were less influenced by the effects of medical interventions, the error norm based on the initial portion of the data was preferred. However, the presented parameter ranges are well out of the range for the usual influenza epidemic parameter values. To confirm our observations on the Istanbul data, the same error criteria were also used for the 2009 A(H1N1) epidemic for the Netherlands, which has a similar population density as in Istanbul. As in the Istanbul case, the parameter ranges do not match the usual influenza epidemic parameter values.

q-bio.PE↗

On the time shift phenomena in epidemic models

In the standard Susceptible-Infected-Removed (SIR) and Susceptible-Exposed-Infected-Removed (SEIR) models, the peak of infected individuals coincides with the in ection point of removed individuals. Nevertheless, a survey based on the data of the 2009 H1N1 epidemic in Istanbul, Turkey [19] displayed an unexpected time shift between the hospital referrals and fatalities. With the motivation of investigating the underlying reason, we use multistage SIR and SEIR models to provide an explanation for this time shift. Numerical solutions of these models present strong evidences that the delay is approximately half of the infection period of the epidemic disease. In addition, graphs of the classical SIR and the multistage SIR models; and the classical SEIR and the multistage SEIR models are compared for various epidemic parameters. Depending on the number of stages, it is observed that the delay varies for relatively small stage numbers whereas it does not change for large numbers in multistage systems. One important result that follows immediately from this observation is that this fixed delay for large numbers explains the time shift. Additionally, depending on the stage number and the duration of the epidemic disease, the distance between the points where each infectious stage reaches its maximum is found approximately both graphically and qualitatively for both systems. Variations of the time shift, the maximum point of the sum of all infectious stages, and the in ection point of the removed stage are observed subject to the stage number N and it is shown that these variations stay unchanged for greater values of N.

q-bio.QM↗

Gromov Product Decomposition of 7-point Metric Spaces

Let $X$ be a finite metric space with elements $P_i$, $i=1,\dots,n$ and with distance functions $d_{ij}$. The Gromov product of the triangle with vertices $P_i$, $P_j$ and $P_k$ at the vertex $P_i$ is defined by $Δ_{ijk}=\frac{1}{2}(d_{ij}+d_{ik}-d_{jk})$. A metric space is called $Δ$-generic, if the set of Gromov products at each $P_i$ has a unique smallest element $Δ_{ijk}$. For a $Δ$-generic metric space, the map $P_i\to (P_jP_k)$, where $(P_jP_k)$ is the edge joining $P_j$ to $P_k$ is a well defined map called the "Gromov product structure" [Bilge, Celik and Kocak, "An equivalence class decomposition of finite metric spaces", Discrete Mathmetics, Vol 340, (2017) 1928-1932]. For n=5, the 3 $Δ$-equivalence classes coincide with the classification of $5$-point metrics. For $n=6$, there are 26 $Δ$-equivalence classes refined by 339 metric classes. In this paper, we present the first systematic treatment of 7-point spaces and we obtain the $Δ$-equivalence decomposition of 7-point metric spaces that consist of 431 equivalence classes.

math.CO↗

Mathematical Characterization of Thermo-reversible Phase Transitions of Agarose Gels

Thermal phase transition temperatures of high and low melting point agarose gels were investigated by using the UV-vis spectroscopy techniques. Transmitted light intensities from the gel samples with different agarose concentrations were monitored during the heating (gel-sol) and cooling (sol-gel) processes. It was observed that the transition temperatures Tm, defined as the location of the maximum of the first derivative of the sigmoidal transition paths obtained from UV-vis technique, slightly increased with the agarose type and concentration. Here, we express the phase transitions of agar-water system, as a representative of reversible physical gels, in terms of a modified Susceptible-Infected-Susceptible epidemic model whose solutions are the well-known 5-point sigmoidal curves. The gel point is hard to determine experimentally and various computational techniques are used for its characterization. Based on previous work, we locate the gel point T0 of sol-gel and gel-sol transitions in terms of the horizontal shift in the sigmoidal transition curve. For the gel-sol transition (heating), T0 is greater than Tm, i.e. later in time, and the difference between T0 and Tm is reduced as agarose content increases. For the sol-gel transition (cooling), T0 is again greater than Tm, but it is earlier in time for all agarose contents and moves forward in time and gets closer to Tm as the agarose content increases.

cond-mat.soft↗

The Critical Point of a Sigmoidal Curve: the Generalized Logistic Equation Example

Let $y(t)$ be a smooth sigmoidal curve, $y^{(n)}(t)$ be its $n$th derivative, $\{t_{m,i}\}$ and $\{t_{a,i}\}$, $i=1,2,\dots$ be the set of points where respectively the derivatives of odd and even order reach their extreme values. The "critical point of the sigmoidal curve" is defined to be the common limit of the sequences $\{t_{m,i}\}$ and $\{t_{a,i}\}$, provided that the limit exists. We prove that if $f(t)=\frac{dy}{dt}$ is an even function such that the magnitude of the analytic representation $|f_A(t)|=|f(t)+if_h(t)|$, where $f_h(t)$ is the Hilbert transform of $f(t)$, is monotone on $(0,\infty)$, then the point $t=0$ is the critical point in the sense above. For the general case, where $f(t)=\frac{dy}{dx}$ is not even, we prove that if $|f_A(t)|$ monotone on $(0,\infty)$ and if the phase of its Fourier transform $F(ω)$ has a limit as $ω\to \pm\infty$, then $t=0$ is still the critical point but as opposed to the previous case, the maximum of $f(t)$ is located away from $t=0$. We compute the Fourier transform of the generalized logistic growth functions and illustrate the notions above on these examples.

math.CA↗

Determination the Parameters of Markowitz Portfolio Optimization Model

The main purpose of this study is the determination of the optimal length of the historical data for the estimation of statistical parameters in Markowitz Portfolio Optimization. We present a trading simulation using Markowitz method, for a portfolio consisting of foreign currency exchange rates and selected assets from the Istanbul Stock Exchange ISE 30, over the period 2001-2009. In the simulation, the expected returns and the covariance matrix are computed from historical data observed for past n days and the target returns are chosen as multiples of the return of the market index. The trading strategy is to buy a stock if the simulation resulted in a feasible solution and sell the stock after exactly m days, independently from the market conditions. The actual returns are computed for n and m being equal to 21, 42, 63, 84 and 105 days and we have seen that the best return is obtained when the observation period is 2 or 3 times the investment period.

q-fin.PM↗

A Susceptible-Exposed-Infected-Removed (Seir) Model For The 2009-2010 A/H1N1 Epidemic In Istanbul

A/H1N1 epidemic data from Istanbul, Turkey during the period June 2009-February 2010 is analyzed with SEIR (Susceptible-Exposed-Infected-Removed) model. The data consist of the daily adult hospitalization numbers and fatalities recorded in various state hospitals serving an adult population of about 1.5-2 million. June 2009-August 2009 period corresponds to the initial stage of the epidemic where the hospitalization rate is nearly %100 and it is excluded from further consideration. The analysis covers the September 2009-February 2010 period, the total number of hospitalizations and fatalities being respectively 869 and 46. It is shown that the maximum correlation between the number of fatalities and hospitalizations occur with a time shift of 9 days and the proportionality constant is δ=0.0537. The SEIR epidemic model is applied to the data by back-shifting the number of fatalities. The determination of the best fitting model is based on the L2 norms of errors between the model and the data and the errors are around %10 and %2.6 for the number of hospitalizations and fatalities, respectively. The parameters in the model are I0, η, ε and β, where I0 is the percentage of people infected initially, η and ε are related to the inverses of the infection and incubation periods and β/η is the representative of the basic reproduction number. These parameters are determined as η=0.09 (1/η =11.11days), I0=10^-7.4, ε=0.32 (1/ε =3.125 days), β=0.585, β/η=6.5.

q-bio.QM↗

On the Classification of Scalar Non-Polynomial Evolution Equations: Quasilinearity

We prove that, for $m\ge 7$, scalar evolution equations of the form $u_t=F(x,t,u,...,u_m)$ which admit a nontrivial conserved density of order $m+1$ are linear in $u_m$. The existence of such conserved densities is a necesary condition for integrability in the sense of admitting a formal symmetry, hence integrable scalar evolution equations of order $m\ge 7$ are quasilinear.

nlin.SI↗

Classification of Integrable Evolution Equations of the Form $u_t=u_{xxx}+f(t,x,u,u_x,u_{xx})$

We obtain the classification of integrable equations of the form $u_t=u_{xxx}+f(t,x,u,u_x,u_{xx})$ using the formal symmetry method of Mikhailov et al [A.V.Mikhailov, A.B.Shabat and V.V.Sokolov, in {\it What is Integrability} edited by V.E. Zakharov (Springer-Verlag, Berlin 1991)]. We show that all such equations can be transformed to an integrable equation of the form $v_t=v_{xxx}+f(v,v_x,v_{xx})$ using transformations $Φ(x,t,u,v,u_x,v_x)=0$, and the $u_{xx}$ dependence can be eliminated except for two equations.

solv-int↗

On the Solution and Ellipticity Properties of the Self-duality equations of Corrigan et al in Eight Dimensions

We show that the two sets of self-dual Yang-Mills equations in 8-dimensions proposed in (E.Corrigan, C.Devchand, D.B.Fairlie and J.Nuyts, {\it Nuclear Physics} {\bf B214}, 452-464, (1983)) form respectively elliptic and overdetermined elliptic systems under the Coulomb gauge condition. In the overdetermined case, the Yang-Mills fields can depend at most on $N$ arbitrary constants, where $N$ is the dimension of the gauge group. We describe a subvariety ${\cal P}_8 $ of the skew-symmetric $8\times 8$ matrices by an eigenvalue criterion and we show that the solutions of the elliptic equations of Corrigan et al. are among the maximal linear submanifolds of ${\cal P}_8$. We propose an eight order action for which the elliptic set is a maximum.

hep-th↗