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Barathi Subramanian

Publications and source records attributed to Barathi Subramanian.

6 recordsLinked to original sources

MUFASA: An Information Utility-Aware Preprocessing Framework for Reliable Model Reasoning in Computational Pathology

Reliable computational pathology depends on preprocessing methods that identify informative tissue regions while excluding artifacts and low-utility regions from whole-slide images (WSI). However, existing preprocessing pipelines often retain such regions or discard diagnostically relevant tissue, thereby limiting downstream model performance, reliability, and robustness across heterogeneous cohorts. Here, we systematically evaluate how these regions affect downstream AI model performance across multiple clinically relevant applications and introduce MUFASA, a generalizable, information utility-aware preprocessing framework for H&E-stained WSI that excludes artifacts and low-utility regions while preserving biologically meaningful tissue. MUFASA integrates slide-level artifact masking, stain-aware tile filtering, reconstruction-based utility stratification of tiles, and targeted recovery of tissue tiles that are over-filtered by earlier phases. Across tumor diagnosis, tumor subtyping, biomarker status prediction, and survival prognostication tasks in diverse cancer cohorts, MUFASA consistently improves downstream model performance relative to widely used preprocessing baselines. These gains are accompanied by reduced artifact-associated attribution in model heatmaps, indicating improved alignment between retained tissue and model attention. Our findings establish WSI preprocessing as a critical determinant of downstream model performance and validity, revealing that even accurate predictions can conceal important failure modes stemming from anatomically implausible reasoning driven by retained artifact-containing and low information-utility tiles.

cs.CE

Gesture2Music: A Low-Latency Real-Time Framework for Continuous Gesture-Driven Music Generation

Gesture-driven music generation is an emerging human-computer interaction paradigm for touch-free and expressive musical interaction. However, many existing approaches treat the task as isolated gesture classification or map gestures to symbolic outputs such as MIDI followed by a separate rendering stage, which limits temporal continuity and real-time responsiveness. This work presents Gesture2Music, a low-latency streaming framework for continuous gesture-driven music generation from live webcam feed. The system processes sequences of body and hand landmarks and uses a causal temporal convolutional network (TCN) to predict note-level musical control events, including pitch, octave, onset, sustain, amplitude, and activity state. Because available gesture-note datasets typically contain only isolated single-note recordings rather than continuous performance sequences, a synthetic stream generation strategy is introduced to construct continuous gesture streams by concatenating single-note clips and deriving heuristic temporal event labels. Temporal consistency and spectral proxy losses are further used to reduce prediction jitter and encourage audio-consistent outputs. During inference, predicted musical events are rendered into continuous music using predefined note samples with rhythmic quantization and scale-constrained filtering for improved musical stability. Experiments on a custom gesture-to-music dataset with 21 gesture-note classes spanning seven tones across three pitch levels demonstrate stable real-time performance, low inference latency of 30\,ms, and improved temporal continuity.

cs.MM

STARC-9: A Large-scale Dataset for Multi-Class Tissue Classification for CRC Histopathology

Multi-class tissue-type classification of colorectal cancer (CRC) histopathologic images is a significant step in the development of downstream machine learning models for diagnosis and treatment planning. However, existing public CRC datasets often lack morphologic diversity, suffer from class imbalance, and contain low-quality image tiles, limiting model performance and generalizability. To address these issues, we introduce STARC-9 (STAnford coloRectal Cancer), a large-scale dataset for multi-class tissue classification. STARC-9 contains 630,000 hematoxylin and eosin-stained image tiles uniformly sampled across nine clinically relevant tissue classes (70,000 tiles per class) from 200 CRC patients at the Stanford University School of Medicine. The dataset was built using a novel framework, DeepCluster++, designed to ensure intra-class diversity and reduce manual curation. First, an encoder from a histopathology-specific autoencoder extracts feature vectors from tiles within each whole-slide image. Then, K-means clustering groups morphologically similar tiles, followed by equal-frequency binning to sample diverse morphologic patterns within each class. The selected tiles are subsequently verified by expert gastrointestinal pathologists to ensure accuracy. This semi-automated process significantly reduces manual effort while producing high-quality, diverse tiles. To evaluate STARC-9, we benchmarked convolutional neural networks, transformers, and pathology-specific foundation models on multi-class CRC tissue classification and segmentation tasks, showing superior generalizability compared to models trained on existing datasets. Although we demonstrate the utility of DeepCluster++ on CRC as a pilot use-case, it is a flexible framework that can be used for constructing high-quality datasets from large WSI repositories across a wide range of cancer and non-cancer applications.

cs.CE

Contrast-Enhanced Gating in GRUs for Robust Low-Data Sequence Learning

Activation functions govern how recurrent networks regulate and transmit information across temporal dependencies. Despite advances in sequence modelling, gated recurrent units (GRUs) still depend on the standard sigmoid and tanh nonlinearities, which can produce weak gate separation and unstable learning, particularly when training data are limited. We introduce squared sigmoid-tanh (SST), a parameter-free activation that squares the gate nonlinearity to increase contrast between near-zero- and high-activations, thereby promoting sharper information filtering during GRU updates. We incorporate SST into GRU gating and evaluate it across low-data settings spanning sign language recognition, human activity recognition, and time-series forecasting and classification. Across tasks, SST-GRU consistently surpasses standard sigmoid/tanh GRU, with the largest improvements observed in the smallest-data domains, while adding negligible computational cost. We further examine gate activation statistics and training dynamics, showing that SST improves training stability, which aligns with its performance gains in data-scarce settings. SST is a parameter-free modification that complements more complex architectural advances by improving gating selectivity in low-data sequence learning.

cs.LG

APALU: A Trainable, Adaptive Activation Function for Deep Learning Networks

Activation function is a pivotal component of deep learning, facilitating the extraction of intricate data patterns. While classical activation functions like ReLU and its variants are extensively utilized, their static nature and simplicity, despite being advantageous, often limit their effectiveness in specialized tasks. The trainable activation functions also struggle sometimes to adapt to the unique characteristics of the data. Addressing these limitations, we introduce a novel trainable activation function, adaptive piecewise approximated activation linear unit (APALU), to enhance the learning performance of deep learning across a broad range of tasks. It presents a unique set of features that enable it to maintain stability and efficiency in the learning process while adapting to complex data representations. Experiments reveal significant improvements over widely used activation functions for different tasks. In image classification, APALU increases MobileNet and GoogleNet accuracy by 0.37% and 0.04%, respectively, on the CIFAR10 dataset. In anomaly detection, it improves the average area under the curve of One-CLASS Deep SVDD by 0.8% on the MNIST dataset, 1.81% and 1.11% improvements with DifferNet, and knowledge distillation, respectively, on the MVTech dataset. Notably, APALU achieves 100% accuracy on a sign language recognition task with a limited dataset. For regression tasks, APALU enhances the performance of deep neural networks and recurrent neural networks on different datasets. These improvements highlight the robustness and adaptability of APALU across diverse deep-learning applications.

cs.LG

From Data to Decisions: The Transformational Power of Machine Learning in Business Recommendations

This research aims to explore the impact of Machine Learning (ML) on the evolution and efficacy of Recommendation Systems (RS), particularly in the context of their growing significance in commercial business environments. Methodologically, the study delves into the role of ML in crafting and refining these systems, focusing on aspects such as data sourcing, feature engineering, and the importance of evaluation metrics, thereby highlighting the iterative nature of enhancing recommendation algorithms. The deployment of Recommendation Engines (RE), driven by advanced algorithms and data analytics, is explored across various domains, showcasing their significant impact on user experience and decision-making processes. These engines not only streamline information discovery and enhance collaboration but also accelerate knowledge acquisition, proving vital in navigating the digital landscape for businesses. They contribute significantly to sales, revenue, and the competitive edge of enterprises by offering improved recommendations that align with individual customer needs. The research identifies the increasing expectation of users for a seamless, intuitive online experience, where content is personalized and dynamically adapted to changing preferences. Future research directions include exploring advancements in deep learning models, ethical considerations in the deployment of RS, and addressing scalability challenges. This study emphasizes the indispensability of comprehending and leveraging ML in RS for researchers and practitioners, to tap into the full potential of personalized recommendation in commercial business prospects.

cs.DC