arXiv subjects

Beatriz Paniagua

Publications and source records attributed to Beatriz Paniagua.

4 recordsLinked to original sources

arXiv2025

Geodesic-based Predictive Shape Modeling of the Right Ventricle in Patients with Hypoplastic Left Heart Syndrome

Hypoplastic left heart syndrome (HLHS) is characterized by severe underdevelopment of left ventricle requiring staged surgical reconstruction (stages) to allow the right ventricle (RV) alone to support the circulation. In this setting changes in RV size and shape over time reflect adaptations to single-ventricle physiology, dysfunction of the associated tricuspid valve (TV), and are associated with circulatory failure. As such, an accurate prediction of the RV shape of a patient would inform understanding of both RV and TV failure, as well as clinical prognosis and associated decision making. We present a geodesic-based predictive shape modeling framework applied a cohort of RVs obtained from 15 HLHS patients at three individual time points. Reasonable predictions on stage 1 RV shapes can generated using pre-stage 1 RV shapes and two predictors from prior clinical and demographic measures. Our results demonstrate the future potential for a data-driven method to predict how the morphology of the RV of an individual patient will change in size and shape over time. Future studies will seek to expand the training sample size and integrate more comprehensive demographic and morphological data into the proposed predictive model.

physics.med-ph↗

arXiv2025

Automated external cervical resorption segmentation in cone-beam CT using local texture features

External cervical resorption (ECR) is a resorptive process affecting teeth. While in some patients, active resorption ceases and gets replaced by osseous tissue, in other cases, the resorption progresses and ultimately results in tooth loss. For proper ECR assessment, cone-beam computed tomography (CBCT) is the recommended imaging modality, enabling a 3-D characterization of these lesions. While it is possible to manually identify and measure ECR resorption in CBCT scans, this process can be time intensive and highly subject to human error. Therefore, there is an urgent need to develop an automated method to identify and quantify the severity of ECR resorption using CBCT. Here, we present a method for ECR lesion segmentation that is based on automatic, binary classification of locally extracted voxel-wise texture features. We evaluate our method on 6 longitudinal CBCT datasets and show that certain texture-features can be used to accurately detect subtle CBCT signal changes due to ECR. We also present preliminary analyses clustering texture features within a lesion to stratify the defects and identify patterns indicative of calcification. These methods are important steps in developing prognostic biomarkers to predict whether ECR will continue to progress or cease, ultimately informing treatment decisions.

cs.CV↗

arXiv2024

Fitting Skeletal Models via Graph-based Learning

Skeletonization is a popular shape analysis technique that models an object's interior as opposed to just its boundary. Fitting template-based skeletal models is a time-consuming process requiring much manual parameter tuning. Recently, machine learning-based methods have shown promise for generating s-reps from object boundaries. In this work, we propose a new skeletonization method which leverages graph convolutional networks to produce skeletal representations (s-reps) from dense segmentation masks. The method is evaluated on both synthetic data and real hippocampus segmentations, achieving promising results and fast inference.

cs.CV↗

arXiv2023

Skeletal Point Representations with Geometric Deep Learning

Skeletonization has been a popular shape analysis technique that models both the interior and exterior of an object. Existing template-based calculations of skeletal models from anatomical structures are a time-consuming manual process. Recently, learning-based methods have been used to extract skeletons from 3D shapes. In this work, we propose novel additional geometric terms for calculating skeletal structures of objects. The results are similar to traditional fitted s-reps but but are produced much more quickly. Evaluation on real clinical data shows that the learned model predicts accurate skeletal representations and shows the impact of proposed geometric losses along with using s-reps as weak supervision.

cs.CV↗