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Benedikt Remlein

Publications and source records attributed to Benedikt Remlein.

7 recordsLinked to original sources

A Minimal Thermodynamically Consistent Chemical Oscillator

Inspired by the chemical reaction network considered as the smallest system featuring a Hopf bifurcation and its reversible extension, we introduce an even more minimal reaction network that is thermodynamically consistent and exhibits autonomous oscillations under nonequilibrium driving. The model combines three features that are rarely realized simultaneously in compact oscillator networks: a chemically plausible structure restricted to uni- and bimolecular reactions, reversibility of such reactions, and analytical tractability. The system consists of three internal species coupled to two chemostatted species and still undergoes a supercritical Hopf bifurcation when a chemostat concentration is varied. To analyze the dynamics and thermodynamics near the onset of oscillations, we employ the mathematical technique of normal-form reduction, which allows obtaining a controlled irreversible approximation that preserves the leading phase-space structure of the full reversible network while enabling explicit calculations. This framework provides analytical access to the bifurcation structure and the leading contributions governing thermodynamic observables. Within this setting, we use the onset of oscillations to characterize the thermodynamic response of the system. In particular, we offer an analytical description of key thermodynamic quantities such as the semi-grand Gibbs free energy and the non-conservative work rate, which exhibit a kink-like discontinuity at the Hopf bifurcation. We thus provide an analytical description of a phenomenon previously characterized only through numerical simulations of more complex networks.

cond-mat.stat-mech

Singular Behavior of Observables at Hopf Bifurcations

Hopf bifurcations are a universal route to self-sustained oscillations in driven systems. Despite the absence of any singular stationary state, we show that time-averaged observables generically exhibit singularities at the onset of oscillations. The origin of this behavior is geometric: phase averaging over the emergent periodic attractor eliminates odd powers of the oscillation amplitude, while the squared amplitude varies smoothly with the distance from the bifurcation. Consequently, the excess of any smooth time-averaged observable admits an integer-power expansion; observables remain finite but display discontinuities in finite-order derivatives. This yields an Ehrenfest-like hierarchy of Hopf singularities, in which the first nonanalytic derivative is determined by the lowest-order coupling between the observable and the limit-cycle waveform that survives phase averaging. Generic observables therefore exhibit kink singularities, while symmetry or geometric cancellations can suppress lower-order couplings and shift nonanalyticity to higher derivatives. We demonstrate this mechanism in chemical, electronic, and climate oscillators. Our results identify supercritical Hopf bifurcations as a universal mechanism for nonanalytic observable behavior, where singular features arise without any underlying singular stationary state. They thus provide a generic setting for singular behavior without divergence.

cond-mat.stat-mech

Emergence of Open Chemical Reaction Network Thermodynamics within Closed Systems

We address a fundamental question: under which conditions do the dynamics and thermodynamics of open chemical reaction networks (CRNs), grounded on the notion of idealized chemostats that exchange selected species, emerge from underlying closed CRNs? While open CRNs provide the standard framework to describe out-of-equilibrium chemical systems, real systems are finite and ultimately relax to equilibrium, leaving the status of this description conceptually unresolved. Here we show that open-CRN behavior arises as an asymptotic regime of closed CRNs when two minimal and physically transparent conditions are met: a time-scale separation, whereby fast reactions effectively act as exchange mechanisms, and an abundance separation, whereby a subset of species behaves as chemostats with diverging chemical capacity. In this regime, both the stochastic dynamics and the thermodynamic structure \ -- including local detailed balance, entropy production, and free-energy balance \ -- emerge to leading order from the underlying closed CRN. Our results apply to arbitrary stoichiometries. They show that chemostats need not be introduced as external idealizations, but instead arise as emergent thermodynamic structures within closed systems, providing a unified and physically grounded foundation for the nonequilibrium thermodynamics of CRNs.

cond-mat.stat-mech

What is a chemostat? Insights from hybrid dynamics and stochastic thermodynamics

At the microscopic scale, open chemical reaction networks are described by stochastic reactions that follow mass-action kinetics and are coupled to chemostats. We show that closed chemical reaction networks -- with specific stoichiometries imposed by mass-action kinetics -- behave like open ones in the limit where the abundances of a subset of species become macroscopic, thus playing the role of chemostats. We prove that this limit is thermodynamically consistent by recovering the local detailed balance condition of open chemical reaction networks and deriving the proper expression of the entropy production rate. In particular, the entropy production rate features two contributions: one accounting for the dissipation of the stochastic reactions, the other for the dissipation of continuous reactions controlling the chemostats. Finally, we illustrate our results for two prototypical examples.

q-bio.MN

Nonequilibrium fluctuations of chemical reaction networks at criticality: The Schl\"ogl model as paradigmatic case

Chemical reaction networks can undergo nonequilibrium phase transitions upon variation of external control parameters like the chemical potential of a species. We investigate the flux in the associated chemostats that is proportional to the entropy production and its critical fluctuations within the Schl\"ogl model. Numerical simulations show that the corresponding diffusion coefficient diverges at the critical point as a function of system size. In the vicinity of the critical point, the diffusion coefficient follows a scaling form. We develop an analytical approach based on the chemical Langevin equation and van Kampen's system size expansion that yields the corresponding exponents in the monostable regime. In the bistable regime, we rely on a two-state approximation in order to analytically describe the critical behavior.

cond-mat.stat-mech

Coherence of oscillations in the weak-noise limit

In a noisy environment, oscillations loose their coherence which can be characterized by a quality factor. We determine this quality factor for oscillations arising from a driven Fokker-Planck dynamics along a periodic one-dimensional potential analytically in the weak noise limit. With this expression, we can prove for this continuum model the analog of an upper bound that has been conjectured for the coherence of oscillations in discrete Markov network models. We show that our approach can also be adapted to motion along a noisy two-dimensional limit cycle. Specifically, we apply our scheme to the noisy Stuart-Landau oscillator and the thermodynamically consistent Brusselator as a simple model for a chemical clock. Our approach thus complements the fairly sophisticated extant general framework based on techniques from Hamilton-Jacobi theory with which we compare our results numerically.

cond-mat.stat-mech

Optimality of non-conservative driving for finite-time processes with discrete states

An optimal finite-time process drives a given initial distribution to a given final one in a given time at the lowest cost as quantified by total entropy production. We prove that for system with discrete states this optimal process involves non-conservative driving, i.e., a genuine driving affinity, in contrast to the case of system with continuous states. In a multicyclic network, the optimal driving affinity is bounded by the number of states within each cycle. If the driving affects forward and backwards rates non-symmetrically, the bound additionally depends on a structural parameter characterizing this asymmetry.

cond-mat.stat-mech