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Benjamin Säfken

Publications and source records attributed to Benjamin Säfken.

14 recordsLinked to original sources

From Uniform to Learned Knots: A Study of Spline-Based Numerical Encodings for Tabular Deep Learning

Numerical preprocessing remains a critical component of tabular deep learning, as the representation of continuous features can strongly affect downstream performance. We systematically study spline-based numerical encodings, including B-splines, M-splines, and integrated splines (I-splines), under uniform, quantile-based, target-aware, and learnable-knot placement. For the learnable variants, we adopt a differentiable knot parameterization that enables stable end-to-end optimization of knot locations jointly with the backbone. We evaluate these encodings on a diverse collection of public regression and classification datasets using MLP, ResNet, and FT-Transformer backbones, and compare them against common numerical preprocessing baselines. Our results show that the effectiveness of numerical encoding depends strongly on the task, encoding size, and backbone. For classification, piecewise-linear encoding (PLE) is the most robust choice overall, while spline-based encodings remain competitive. For regression, no single encoding dominates, with performance depending on the spline family and knot-placement strategy, and larger gains generally observed for MLP and ResNet than for FT-Transformer. Learnable-knot variants can be optimized stably but may substantially increase training cost. Overall, numerical encodings should therefore be assessed jointly in terms of predictive performance and computational overhead. The implementation is publicly available at https://github.com/mkumar73/tdl-numerical-encodings/.

cs.LG

EviNAM: Intelligibility and Uncertainty via Evidential Neural Additive Models

Intelligibility and accurate uncertainty estimation are crucial for reliable decision-making. In this paper, we propose EviNAM, an extension of evidential learning that integrates the interpretability of Neural Additive Models (NAMs) with principled uncertainty estimation. Unlike standard Bayesian neural networks and previous evidential methods, EviNAM enables, in a single pass, both the estimation of the aleatoric and epistemic uncertainty as well as explicit feature contributions. Experiments on synthetic and real data demonstrate that EviNAM matches state-of-the-art predictive performance. While we focus on regression, our method extends naturally to classification and generalized additive models, offering a path toward more intelligible and trustworthy predictions.

cs.LG

GPTopic: Dynamic and Interactive Topic Representations

Topic modeling seems to be almost synonymous with generating lists of top words to represent topics within large text corpora. However, deducing a topic from such list of individual terms can require substantial expertise and experience, making topic modelling less accessible to people unfamiliar with the particularities and pitfalls of top-word interpretation. A topic representation limited to top-words might further fall short of offering a comprehensive and easily accessible characterization of the various aspects, facets and nuances a topic might have. To address these challenges, we introduce GPTopic, a software package that leverages Large Language Models (LLMs) to create dynamic, interactive topic representations. GPTopic provides an intuitive chat interface for users to explore, analyze, and refine topics interactively, making topic modeling more accessible and comprehensive. The corresponding code is available here: https://github.com/ArikReuter/TopicGPT.

cs.CL

Mambular: A Sequential Model for Tabular Deep Learning

The analysis of tabular data has traditionally been dominated by gradient-boosted decision trees (GBDTs), known for their proficiency with mixed categorical and numerical features. However, recent deep learning innovations are challenging this dominance. This paper investigates the use of autoregressive state-space models for tabular data and compares their performance against established benchmark models. Additionally, we explore various adaptations of these models, including different pooling strategies, feature interaction mechanisms, and bi-directional processing techniques to understand their effectiveness for tabular data. Our findings indicate that interpreting features as a sequence and processing them and their interactions through structured state-space layers can lead to significant performance improvement. This research underscores the versatility of autoregressive models in tabular data analysis, positioning them as a promising alternative that could substantially enhance deep learning capabilities in this traditionally challenging area. The source code is available at https://github.com/basf/mamba-tabular.

cs.LG

Probabilistic Topic Modelling with Transformer Representations

Topic modelling was mostly dominated by Bayesian graphical models during the last decade. With the rise of transformers in Natural Language Processing, however, several successful models that rely on straightforward clustering approaches in transformer-based embedding spaces have emerged and consolidated the notion of topics as clusters of embedding vectors. We propose the Transformer-Representation Neural Topic Model (TNTM), which combines the benefits of topic representations in transformer-based embedding spaces and probabilistic modelling. Therefore, this approach unifies the powerful and versatile notion of topics based on transformer embeddings with fully probabilistic modelling, as in models such as Latent Dirichlet Allocation (LDA). We utilize the variational autoencoder (VAE) framework for improved inference speed and modelling flexibility. Experimental results show that our proposed model achieves results on par with various state-of-the-art approaches in terms of embedding coherence while maintaining almost perfect topic diversity. The corresponding source code is available at https://github.com/ArikReuter/TNTM.

cs.LG

Neural Additive Models for Location Scale and Shape: A Framework for Interpretable Neural Regression Beyond the Mean

Deep neural networks (DNNs) have proven to be highly effective in a variety of tasks, making them the go-to method for problems requiring high-level predictive power. Despite this success, the inner workings of DNNs are often not transparent, making them difficult to interpret or understand. This lack of interpretability has led to increased research on inherently interpretable neural networks in recent years. Models such as Neural Additive Models (NAMs) achieve visual interpretability through the combination of classical statistical methods with DNNs. However, these approaches only concentrate on mean response predictions, leaving out other properties of the response distribution of the underlying data. We propose Neural Additive Models for Location Scale and Shape (NAMLSS), a modelling framework that combines the predictive power of classical deep learning models with the inherent advantages of distributional regression while maintaining the interpretability of additive models. The code is available at the following link: https://github.com/AnFreTh/NAMpy

stat.ML

Topics in the Haystack: Extracting and Evaluating Topics beyond Coherence

Extracting and identifying latent topics in large text corpora has gained increasing importance in Natural Language Processing (NLP). Most models, whether probabilistic models similar to Latent Dirichlet Allocation (LDA) or neural topic models, follow the same underlying approach of topic interpretability and topic extraction. We propose a method that incorporates a deeper understanding of both sentence and document themes, and goes beyond simply analyzing word frequencies in the data. This allows our model to detect latent topics that may include uncommon words or neologisms, as well as words not present in the documents themselves. Additionally, we propose several new evaluation metrics based on intruder words and similarity measures in the semantic space. We present correlation coefficients with human identification of intruder words and achieve near-human level results at the word-intrusion task. We demonstrate the competitive performance of our method with a large benchmark study, and achieve superior results compared to state-of-the-art topic modeling and document clustering models.

cs.CL

Structural Neural Additive Models: Enhanced Interpretable Machine Learning

Deep neural networks (DNNs) have shown exceptional performances in a wide range of tasks and have become the go-to method for problems requiring high-level predictive power. There has been extensive research on how DNNs arrive at their decisions, however, the inherently uninterpretable networks remain up to this day mostly unobservable "black boxes". In recent years, the field has seen a push towards interpretable neural networks, such as the visually interpretable Neural Additive Models (NAMs). We propose a further step into the direction of intelligibility beyond the mere visualization of feature effects and propose Structural Neural Additive Models (SNAMs). A modeling framework that combines classical and clearly interpretable statistical methods with the predictive power of neural applications. Our experiments validate the predictive performances of SNAMs. The proposed framework performs comparable to state-of-the-art fully connected DNNs and we show that SNAMs can even outperform NAMs while remaining inherently more interpretable.

cs.LG

Human in the loop: How to effectively create coherent topics by manually labeling only a few documents per class

Few-shot methods for accurate modeling under sparse label-settings have improved significantly. However, the applications of few-shot modeling in natural language processing remain solely in the field of document classification. With recent performance improvements, supervised few-shot methods, combined with a simple topic extraction method pose a significant challenge to unsupervised topic modeling methods. Our research shows that supervised few-shot learning, combined with a simple topic extraction method, can outperform unsupervised topic modeling techniques in terms of generating coherent topics, even when only a few labeled documents per class are used.

cs.CL

Twitmo: A Twitter Data Topic Modeling and Visualization Package for R

We present Twitmo, a package that provides a broad range of methods to collect, pre-process, analyze and visualize geo-tagged Twitter data. Twitmo enables the user to collect geo-tagged Tweets from Twitter and and provides a comprehensive and user-friendly toolbox to generate topic distributions from Latent Dirichlet Allocations (LDA), correlated topic models (CTM) and structural topic models (STM). Functions are included for pre-processing of text, model building and prediction. In addition, one of the innovations of the package is the automatic pooling of Tweets into longer pseudo-documents using hashtags and cosine similarities for better topic coherence. The package additionally comes with functionality to visualize collected data sets and fitted models in static as well as interactive ways and offers built-in support for model visualizations via LDAvis providing great convenience for researchers in this area. The Twitmo package is an innovative toolbox that can be used to analyze public discourse of various topics, political parties or persons of interest in space and time.

cs.IR

Community-Detection via Hashtag-Graphs for Semi-Supervised NMF Topic Models

Extracting topics from large collections of unstructured text-documents has become a central task in current NLP applications and algorithms like NMF, LDA as well as their generalizations are the well-established current state of the art. However, especially when it comes to short text documents like Tweets, these approaches often lead to unsatisfying results due to the sparsity of the document-feature matrices. Even though, several approaches have been proposed to overcome this sparsity by taking additional information into account, these are merely focused on the aggregation of similar documents and the estimation of word-co-occurrences. This ultimately completely neglects the fact that a lot of topical-information can be actually retrieved from so-called hashtag-graphs by applying common community detection algorithms. Therefore, this paper outlines a novel approach on how to integrate topic structures of hashtag graphs into the estimation of topic models by connecting graph-based community detection and semi-supervised NMF. By applying this approach on recently streamed Twitter data it will be seen that this procedure actually leads to more intuitive and humanly interpretable topics.

cs.SI

Gradient Boosting for Linear Mixed Models

Gradient boosting from the field of statistical learning is widely known as a powerful framework for estimation and selection of predictor effects in various regression models by adapting concepts from classification theory. Current boosting approaches also offer methods accounting for random effects and thus enable prediction of mixed models for longitudinal and clustered data. However, these approaches include several flaws resulting in unbalanced effect selection with falsely induced shrinkage and a low convergence rate on the one hand and biased estimates of the random effects on the other hand. We therefore propose a new boosting algorithm which explicitly accounts for the random structure by excluding it from the selection procedure, properly correcting the random effects estimates and in addition providing likelihood-based estimation of the random effects variance structure. The new algorithm offers an organic and unbiased fitting approach, which is shown via simulations and data examples.

stat.ME

Conditional Model Selection in Mixed-Effects Models with cAIC4

Model selection in mixed models based on the conditional distribution is appropriate for many practical applications and has been a focus of recent statistical research. In this paper we introduce the R-package cAIC4 that allows for the computation of the conditional Akaike Information Criterion (cAIC). Computation of the conditional AIC needs to take into account the uncertainty of the random effects variance and is therefore not straightforward. We introduce a fast and stable implementation for the calculation of the cAIC for linear mixed models estimated with lme4 and additive mixed models estimated with gamm4 . Furthermore, cAIC4 offers a stepwise function that allows for a fully automated stepwise selection scheme for mixed models based on the conditional AIC. Examples of many possible applications are presented to illustrate the practical impact and easy handling of the package.

stat.CO

Smoothing parameter and model selection for general smooth models

This paper discusses a general framework for smoothing parameter estimation for models with regular likelihoods constructed in terms of unknown smooth functions of covariates. Gaussian random effects and parametric terms may also be present. By construction the method is numerically stable and convergent, and enables smoothing parameter uncertainty to be quantified. The latter enables us to fix a well known problem with AIC for such models. The smooth functions are represented by reduced rank spline like smoothers, with associated quadratic penalties measuring function smoothness. Model estimation is by penalized likelihood maximization, where the smoothing parameters controlling the extent of penalization are estimated by Laplace approximate marginal likelihood. The methods cover, for example, generalized additive models for non-exponential family responses (for example beta, ordered categorical, scaled t distribution, negative binomial and Tweedie distributions), generalized additive models for location scale and shape (for example two stage zero inflation models, and Gaussian location-scale models), Cox proportional hazards models and multivariate additive models. The framework reduces the implementation of new model classes to the coding of some standard derivatives of the log likelihood.

stat.ME