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Bernardo Sabatini

Publications and source records attributed to Bernardo Sabatini.

3 recordsLinked to original sources

Synaptic clustering emerges from learning and supports covariance discrimination

Functional synapse clusters (FSCs) are synapses with correlated presynaptic activity that are colocalized on the same neuronal dendritic branch. FSCs have been observed after learning in cortical and hippocampal pyramidal neurons. However, previous efforts to ablate FSCs by pharmacologically blocking dendritic nonlinearities to establish causal necessity may have confounded effects. Therefore, whether FSCs are causally necessary for computation is unknown. Here, we attempt to isolate FSCs from this potential confounder in silico. We train Dendrinet, an artificial neural network architecture with hierarchical dendritic segments and sparse conductance-based synapses, on a Permuted-Covariance Classification (PCC) task. This task cannot be solved by single-layer linear-nonlinear artificial neural networks. We find that neurons with dendrites can be trained to solve the task and develop excitatory and inhibitory FSCs if both dendritic nonlinearities and synaptic structural plasticity are active. Turning off dendritic nonlinearities reduces excitatory FSCs, which replicates experimental findings, and reduces performance while unexpectedly increasing inhibitory FSCs. Furthermore, shuffling learned synaptic connectivity while keeping the nonlinearities fixed reduces performance. This shows sensitivity to learned connectivity, but the shuffle does not change only FSCs. Shuffling inhibitory synapse properties reduces performance more than the corresponding excitatory shuffle, showing higher sensitivity to inhibitory organization. This work suggests that dendritic compartmentalization and learned synaptic organization can support computation of covariance structure.

q-bio.NC

Credit Assignment via Neural Manifold Noise Correlation

Credit assignment--how changes in individual neurons and synapses affect a network's output--is central to learning in brains and machines. Noise correlation, which estimates gradients by correlating perturbations of activity with changes in output, provides a biologically plausible solution to credit assignment but scales poorly as accurately estimating the Jacobian requires that the number of perturbations scale with network size. Moreover, isotropic noise conflicts with neurobiological observations that neural activity lies on a low-dimensional manifold. To address these drawbacks, we propose neural manifold noise correlation (NMNC), which performs credit assignment using perturbations restricted to the neural manifold. We show theoretically and empirically that the Jacobian row space aligns with the neural manifold in trained networks, and that manifold dimensionality scales slowly with network size. NMNC substantially improves performance and sample efficiency over vanilla noise correlation in convolutional networks trained on CIFAR-10, ImageNet-scale models, and recurrent networks. NMNC also yields representations more similar to the primate visual system than vanilla noise correlation. These findings offer a mechanistic hypothesis for how biological circuits could support credit assignment, and suggest that biologically inspired constraints may enable, rather than limit, effective learning at scale.

cs.LG

Feedback-assisted Femtosecond Pulsed Laser Ablation of Non-Planar Metal Surfaces: Fabrication of Optical Apertures on Tapered Fibers for Optical Neural Interfaces

We propose a feedback-assisted direct laser writing method to perform laser ablation of fiber optics devices in which their light-collection signal is used to optimize their properties. A femtosecond-pulsed laser beam is used to ablate a metal coating deposited around a tapered optical fiber, employed to show the suitability of the approach to pattern devices with small radius of curvature. During processing, the same pulses generate two-photon fluorescence in the surrounding environment and the signal is monitored to identify different patterning regimes over time through spectral analysis. The employed fs beam mostly interacts with the metal coating, leaving almost intact the underlying silica and enabling fluorescence to couple with a specific subset of guided modes, as verified by far-field analysis. Although the method is described here for tapered optical fibers used to obtain efficient light collection in the field of optical neural interfaces, it can be easily extended to other waveguides-based devices and represents a general approach to support the implementation closed-loop laser ablation system of fiber optics.

physics.app-ph