arXiv subjects

Bo Du

Publications and source records attributed to Bo Du.

At least 145 records · Page 8Linked to original sources

arXiv2025

Marine Saliency Segmenter: Object-Focused Conditional Diffusion with Region-Level Semantic Knowledge Distillation

Marine Saliency Segmentation (MSS) plays a pivotal role in various vision-based marine exploration tasks. However, existing marine segmentation techniques face the dilemma of object mislocalization and imprecise boundaries due to the complex underwater environment. Meanwhile, despite the impressive performance of diffusion models in visual segmentation, there remains potential to further leverage contextual semantics to enhance feature learning of region-level salient objects, thereby improving segmentation outcomes. Building on this insight, we propose DiffMSS, a novel marine saliency segmenter based on the diffusion model, which utilizes semantic knowledge distillation to guide the segmentation of marine salient objects. Specifically, we design a region-word similarity matching mechanism to identify salient terms at the word level from the text descriptions. These high-level semantic features guide the conditional feature learning network in generating salient and accurate diffusion conditions with semantic knowledge distillation. To further refine the segmentation of fine-grained structures in unique marine organisms, we develop the dedicated consensus deterministic sampling to suppress overconfident missegmentations. Comprehensive experiments demonstrate the superior performance of DiffMSS over state-of-the-art methods in both quantitative and qualitative evaluations.

cs.CV↗

arXiv2025

From Bench to Bedside: A DeepSeek-Powered AI System for Automated Chest Radiograph Interpretation in Clinical Practice

A global shortage of radiologists has been exacerbated by the significant volume of chest X-ray workloads, particularly in primary care. Although multimodal large language models show promise, existing evaluations predominantly rely on automated metrics or retrospective analyses, lacking rigorous prospective clinical validation. Janus-Pro-CXR (1B), a chest X-ray interpretation system based on DeepSeek Janus-Pro model, was developed and rigorously validated through a multicenter prospective trial (NCT06874647). Our system outperforms state-of-the-art X-ray report generation models in automated report generation, surpassing even larger-scale models including ChatGPT 4o (200B parameters), while demonstrating robust detection of eight clinically critical radiographic findings (area under the curve, AUC > 0.8). Retrospective evaluation confirms significantly higher report accuracy than Janus-Pro and ChatGPT 4o. In prospective clinical deployment, AI assistance significantly improved report quality scores (4.37 vs. 4.11, P < 0.001), reduced interpretation time by 18.5% (P < 0.001), and was preferred by a majority of experts (3 out of 5) in 52.7% of cases. Through lightweight architecture and domain-specific optimization, Janus-Pro-CXR improves diagnostic reliability and workflow efficiency, particularly in resource-constrained settings. The model architecture and implementation framework will be open-sourced to facilitate the clinical translation of AI-assisted radiology solutions.

cs.HC↗

arXiv2025

Towards Unified Modeling in Federated Multi-Task Learning via Subspace Decoupling

Federated Multi-Task Learning (FMTL) enables multiple clients performing heterogeneous tasks without exchanging their local data, offering broad potential for privacy preserving multi-task collaboration. However, most existing methods focus on building personalized models for each client and unable to support the aggregation of multiple heterogeneous tasks into a unified model. As a result, in real-world scenarios where task objectives, label spaces, and optimization paths vary significantly, conventional FMTL methods struggle to achieve effective joint training. To address this challenge, we propose FedDEA (Federated Decoupled Aggregation), an update-structure-aware aggregation method specifically designed for multi-task model integration. Our method dynamically identifies task-relevant dimensions based on the response strength of local updates and enhances their optimization effectiveness through rescaling. This mechanism effectively suppresses cross-task interference and enables task-level decoupled aggregation within a unified global model. FedDEA does not rely on task labels or architectural modifications, making it broadly applicable and deployment-friendly. Experimental results demonstrate that it can be easily integrated into various mainstream federated optimization algorithms and consistently delivers significant overall performance improvements on widely used NYUD-V2 and PASCAL-Context. These results validate the robustness and generalization capabilities of FedDEA under highly heterogeneous task settings.

cs.LG↗

arXiv2025

KaFT: Knowledge-aware Fine-tuning for Boosting LLMs' Domain-specific Question-Answering Performance

Supervised fine-tuning (SFT) is a common approach to improve the domain-specific question-answering (QA) performance of large language models (LLMs). However, recent literature reveals that due to the conflicts between LLMs' internal knowledge and the context knowledge of training data, vanilla SFT using the full QA training set is usually suboptimal. In this paper, we first design a query diversification strategy for robust conflict detection and then conduct a series of experiments to analyze the impact of knowledge conflict. We find that 1) training samples with varied conflicts contribute differently, where SFT on the data with large conflicts leads to catastrophic performance drops; 2) compared to directly filtering out the conflict data, appropriately applying the conflict data would be more beneficial. Motivated by this, we propose a simple-yet-effective Knowledge-aware Fine-tuning (namely KaFT) approach to effectively boost LLMs' performance. The core of KaFT is to adapt the training weight by assigning different rewards for different training samples according to conflict level. Extensive experiments show that KaFT brings consistent and significant improvements across four LLMs. More analyses prove that KaFT effectively improves the model generalization and alleviates the hallucination.

cs.CL↗

arXiv2025

Resolving Knowledge Conflicts in Domain-specific Data Selection: A Case Study on Medical Instruction-tuning

Domain-specific instruction-tuning has become the defacto standard for improving the performance of large language models (LLMs) in specialized applications, e.g., medical question answering. Since the instruction-tuning dataset might contain redundant or low-quality data, data selection (DS) is usually required to maximize the data efficiency. Despite the successes in the general domain, current DS methods often struggle to select the desired data for domain-specific instruction-tuning. One of the main reasons is that they neglect the impact of knowledge conflicts, i.e., the discrepancy between LLMs' pretrained knowledge and context knowledge of instruction data, which could damage LLMs' prior abilities and lead to hallucination. To this end, we propose a simple-yet-effective Knowledge-aware Data Selection (namely KDS) framework to select the domain-specific instruction-tuning data that meets LLMs' actual needs. The core of KDS is to leverage two knowledge-aware metrics for quantitatively measuring knowledge conflicts from two aspects: context-memory knowledge alignment and intra-memory knowledge consistency. By filtering the data with large knowledge conflicts and sampling the high-quality and diverse data, KDS can effectively stimulate the LLMs' abilities and achieve better domain-specific performance. Taking the medical domain as the testbed, we conduct extensive experiments and empirically prove that KDS surpasses the other baselines and brings significant and consistent performance gains among all LLMs. More encouragingly, KDS effectively improves the model generalization and alleviates the hallucination problem.

cs.CL↗

arXiv2025

Segment First or Comprehend First? Explore the Limit of Unsupervised Word Segmentation with Large Language Models

Word segmentation stands as a cornerstone of Natural Language Processing (NLP). Based on the concept of "comprehend first, segment later", we propose a new framework to explore the limit of unsupervised word segmentation with Large Language Models (LLMs) and evaluate the semantic understanding capabilities of LLMs based on word segmentation. We employ current mainstream LLMs to perform word segmentation across multiple languages to assess LLMs' "comprehension". Our findings reveal that LLMs are capable of following simple prompts to segment raw text into words. There is a trend suggesting that models with more parameters tend to perform better on multiple languages. Additionally, we introduce a novel unsupervised method, termed LLACA ($\textbf{L}$arge $\textbf{L}$anguage Model-Inspired $\textbf{A}$ho-$\textbf{C}$orasick $\textbf{A}$utomaton). Leveraging the advanced pattern recognition capabilities of Aho-Corasick automata, LLACA innovatively combines these with the deep insights of well-pretrained LLMs. This approach not only enables the construction of a dynamic $n$-gram model that adjusts based on contextual information but also integrates the nuanced understanding of LLMs, offering significant improvements over traditional methods. Our source code is available at https://github.com/hkr04/LLACA

cs.CL↗

arXiv2025

Retrieval-Augmented Perception: High-Resolution Image Perception Meets Visual RAG

High-resolution (HR) image perception remains a key challenge in multimodal large language models (MLLMs). To overcome the limitations of existing methods, this paper shifts away from prior dedicated heuristic approaches and revisits the most fundamental idea to HR perception by enhancing the long-context capability of MLLMs, driven by recent advances in long-context techniques like retrieval-augmented generation (RAG) for general LLMs. Towards this end, this paper presents the first study exploring the use of RAG to address HR perception challenges. Specifically, we propose Retrieval-Augmented Perception (RAP), a training-free framework that retrieves and fuses relevant image crops while preserving spatial context using the proposed Spatial-Awareness Layout. To accommodate different tasks, the proposed Retrieved-Exploration Search (RE-Search) dynamically selects the optimal number of crops based on model confidence and retrieval scores. Experimental results on HR benchmarks demonstrate the significant effectiveness of RAP, with LLaVA-v1.5-13B achieving a 43% improvement on $V^*$ Bench and 19% on HR-Bench.

cs.CV↗

arXiv2025

Backdoor Cleaning without External Guidance in MLLM Fine-tuning

Multimodal Large Language Models (MLLMs) are increasingly deployed in fine-tuning-as-a-service (FTaaS) settings, where user-submitted datasets adapt general-purpose models to downstream tasks. This flexibility, however, introduces serious security risks, as malicious fine-tuning can implant backdoors into MLLMs with minimal effort. In this paper, we observe that backdoor triggers systematically disrupt cross-modal processing by causing abnormal attention concentration on non-semantic regions--a phenomenon we term attention collapse. Based on this insight, we propose Believe Your Eyes (BYE), a data filtering framework that leverages attention entropy patterns as self-supervised signals to identify and filter backdoor samples. BYE operates via a three-stage pipeline: (1) extracting attention maps using the fine-tuned model, (2) computing entropy scores and profiling sensitive layers via bimodal separation, and (3) performing unsupervised clustering to remove suspicious samples. Unlike prior defenses, BYE equires no clean supervision, auxiliary labels, or model modifications. Extensive experiments across various datasets, models, and diverse trigger types validate BYE's effectiveness: it achieves near-zero attack success rates while maintaining clean-task performance, offering a robust and generalizable solution against backdoor threats in MLLMs.

cs.CR↗

arXiv2025

Reasoning-OCR: Can Large Multimodal Models Solve Complex Logical Reasoning Problems from OCR Cues?

Large Multimodal Models (LMMs) have become increasingly versatile, accompanied by impressive Optical Character Recognition (OCR) related capabilities. Existing OCR-related benchmarks emphasize evaluating LMMs' abilities of relatively simple visual question answering, visual-text parsing, etc. However, the extent to which LMMs can deal with complex logical reasoning problems based on OCR cues is relatively unexplored. To this end, we introduce the Reasoning-OCR benchmark, which challenges LMMs to solve complex reasoning problems based on the cues that can be extracted from rich visual-text. Reasoning-OCR covers six visual scenarios and encompasses 150 meticulously designed questions categorized into six reasoning challenges. Additionally, Reasoning-OCR minimizes the impact of field-specialized knowledge. Our evaluation offers some insights for proprietary and open-source LMMs in different reasoning challenges, underscoring the urgent to improve the reasoning performance. We hope Reasoning-OCR can inspire and facilitate future research on enhancing complex reasoning ability based on OCR cues. Reasoning-OCR is publicly available at https://github.com/Hxyz-123/ReasoningOCR.

cs.CV↗

arXiv2025

Pseudo-Labeling Based Practical Semi-Supervised Meta-Training for Few-Shot Learning

Most existing few-shot learning (FSL) methods require a large amount of labeled data in meta-training, which is a major limit. To reduce the requirement of labels, a semi-supervised meta-training (SSMT) setting has been proposed for FSL, which includes only a few labeled samples and numbers of unlabeled samples in base classes. However, existing methods under this setting require class-aware sample selection from the unlabeled set, which violates the assumption of unlabeled set. In this paper, we propose a practical semi-supervised meta-training setting with truly unlabeled data to facilitate the applications of FSL in realistic scenarios. To better utilize both the labeled and truly unlabeled data, we propose a simple and effective meta-training framework, called pseudo-labeling based meta-learning (PLML). Firstly, we train a classifier via common semi-supervised learning (SSL) and use it to obtain the pseudo-labels of unlabeled data. Then we build few-shot tasks from labeled and pseudo-labeled data and design a novel finetuning method with feature smoothing and noise suppression to better learn the FSL model from noise labels. Surprisingly, through extensive experiments across two FSL datasets, we find that this simple meta-training framework effectively prevents the performance degradation of various FSL models under limited labeled data, and also significantly outperforms the state-of-the-art SSMT models. Besides, benefiting from meta-training, our method also improves two representative SSL algorithms as well.

cs.CV↗

arXiv2025

Fragment-Masked Diffusion for Molecular Optimization

Molecular optimization is a crucial aspect of drug discovery, aimed at refining molecular structures to enhance drug efficacy and minimize side effects, ultimately accelerating the overall drug development process. Many molecular optimization methods have been proposed, significantly advancing drug discovery. These methods primarily on understanding the specific drug target structures or their hypothesized roles in combating diseases. However, challenges such as a limited number of available targets and a difficulty capturing clear structures hinder innovative drug development. In contrast, phenotypic drug discovery (PDD) does not depend on clear target structures and can identify hits with novel and unbiased polypharmacology signatures. As a result, PDD-based molecular optimization can reduce potential safety risks while optimizing phenotypic activity, thereby increasing the likelihood of clinical success. Therefore, we propose a fragment-masked molecular optimization method based on PDD (FMOP). FMOP employs a regression-free diffusion model to conditionally optimize the molecular masked regions, effectively generating new molecules with similar scaffolds. On the large-scale drug response dataset GDSCv2, we optimize the potential molecules across all 985 cell lines. The overall experiments demonstrate that the in-silico optimization success rate reaches 95.4\%, with an average efficacy increase of 7.5\%. Additionally, we conduct extensive ablation and visualization experiments, confirming that FMOP is an effective and robust molecular optimization method. The code is available at: https://anonymous.4open.science/r/FMOP-98C2.

q-bio.BM↗

arXiv2025

Graph-structured Small Molecule Drug Discovery Through Deep Learning: Progress, Challenges, and Opportunities

Due to their excellent drug-like and pharmacokinetic properties, small molecule drugs are widely used to treat various diseases, making them a critical component of drug discovery. In recent years, with the rapid development of deep learning (DL) techniques, DL-based small molecule drug discovery methods have achieved excellent performance in prediction accuracy, speed, and complex molecular relationship modeling compared to traditional machine learning approaches. These advancements enhance drug screening efficiency and optimization and provide more precise and effective solutions for various drug discovery tasks. Contributing to this field's development, this paper aims to systematically summarize and generalize the recent key tasks and representative techniques in graph-structured small molecule drug discovery in recent years. Specifically, we provide an overview of the major tasks in small molecule drug discovery and their interrelationships. Next, we analyze the six core tasks, summarizing the related methods, commonly used datasets, and technological development trends. Finally, we discuss key challenges, such as interpretability and out-of-distribution generalization, and offer our insights into future research directions for small molecule drug discovery.

cs.LG↗

arXiv2025

Exploiting Text Semantics for Few and Zero Shot Node Classification on Text-attributed Graph

Text-attributed graph (TAG) provides a text description for each graph node, and few- and zero-shot node classification on TAGs have many applications in fields such as academia and social networks. Existing work utilizes various graph-based augmentation techniques to train the node and text embeddings, while text-based augmentations are largely unexplored. In this paper, we propose Text Semantics Augmentation (TSA) to improve accuracy by introducing more text semantic supervision signals. Specifically, we design two augmentation techniques, i.e., positive semantics matching and negative semantics contrast, to provide more reference texts for each graph node or text description. Positive semantic matching retrieves texts with similar embeddings to match with a graph node. Negative semantic contrast adds a negative prompt to construct a text description with the opposite semantics, which is contrasted with the original node and text. We evaluate TSA on 5 datasets and compare with 13 state-of-the-art baselines. The results show that TSA consistently outperforms all baselines, and its accuracy improvements over the best-performing baseline are usually over 5%.

cs.CL↗

arXiv2025

TiMo: Spatiotemporal Foundation Model for Satellite Image Time Series

Satellite image time series (SITS) provide continuous observations of the Earth's surface, making them essential for applications such as environmental management and disaster assessment. However, existing spatiotemporal foundation models rely on plain vision transformers, which encode entire temporal sequences without explicitly capturing multiscale spatiotemporal relationships between land objects. This limitation hinders their effectiveness in downstream tasks. To overcome this challenge, we propose TiMo, a novel hierarchical vision transformer foundation model tailored for SITS analysis. At its core, we introduce a spatiotemporal gyroscope attention mechanism that dynamically captures evolving multiscale patterns across both time and space. For pre-training, we curate MillionST, a large-scale dataset of one million images from 100,000 geographic locations, each captured across 10 temporal phases over five years, encompassing diverse geospatial changes and seasonal variations. Leveraging this dataset, we adapt masked image modeling to pre-train TiMo, enabling it to effectively learn and encode generalizable spatiotemporal representations.Extensive experiments across multiple spatiotemporal tasks-including deforestation monitoring, land cover segmentation, crop type classification, and flood detection-demonstrate TiMo's superiority over state-of-the-art methods. Code, model, and dataset will be released at https://github.com/MiliLab/TiMo.

cs.CV↗

arXiv2025

DGSolver: Diffusion Generalist Solver with Universal Posterior Sampling for Image Restoration

Diffusion models have achieved remarkable progress in universal image restoration. While existing methods speed up inference by reducing sampling steps, substantial step intervals often introduce cumulative errors. Moreover, they struggle to balance the commonality of degradation representations and restoration quality. To address these challenges, we introduce \textbf{DGSolver}, a diffusion generalist solver with universal posterior sampling. We first derive the exact ordinary differential equations for generalist diffusion models and tailor high-order solvers with a queue-based accelerated sampling strategy to improve both accuracy and efficiency. We then integrate universal posterior sampling to better approximate manifold-constrained gradients, yielding a more accurate noise estimation and correcting errors in inverse inference. Extensive experiments show that DGSolver outperforms state-of-the-art methods in restoration accuracy, stability, and scalability, both qualitatively and quantitatively. Code and models will be available at https://github.com/MiliLab/DGSolver.

cs.CV↗

arXiv2025

Advances in Automated Fetal Brain MRI Segmentation and Biometry: Insights from the FeTA 2024 Challenge

Accurate fetal brain tissue segmentation and biometric analysis are essential for studying brain development in utero. The FeTA Challenge 2024 advanced automated fetal brain MRI analysis by introducing biometry prediction as a new task alongside tissue segmentation. For the first time, our diverse multi-centric test set included data from a new low-field (0.55T) MRI dataset. Evaluation metrics were also expanded to include the topology-specific Euler characteristic difference (ED). Sixteen teams submitted segmentation methods, most of which performed consistently across both high- and low-field scans. However, longitudinal trends indicate that segmentation accuracy may be reaching a plateau, with results now approaching inter-rater variability. The ED metric uncovered topological differences that were missed by conventional metrics, while the low-field dataset achieved the highest segmentation scores, highlighting the potential of affordable imaging systems when paired with high-quality reconstruction. Seven teams participated in the biometry task, but most methods failed to outperform a simple baseline that predicted measurements based solely on gestational age, underscoring the challenge of extracting reliable biometric estimates from image data alone. Domain shift analysis identified image quality as the most significant factor affecting model generalization, with super-resolution pipelines also playing a substantial role. Other factors, such as gestational age, pathology, and acquisition site, had smaller, though still measurable, effects. Overall, FeTA 2024 offers a comprehensive benchmark for multi-class segmentation and biometry estimation in fetal brain MRI, underscoring the need for data-centric approaches, improved topological evaluation, and greater dataset diversity to enable clinically robust and generalizable AI tools.

cs.CV↗

arXiv2025

Faster MoE LLM Inference for Extremely Large Models

Sparse Mixture of Experts (MoE) large language models (LLMs) are gradually becoming the mainstream approach for ultra-large-scale models. Existing optimization efforts for MoE models have focused primarily on coarse-grained MoE architectures. With the emergence of DeepSeek Models, fine-grained MoE models are gaining popularity, yet research on them remains limited. Therefore, we want to discuss the efficiency dynamic under different service loads. Additionally, fine-grained models allow deployers to reduce the number of routed experts, both activated counts and total counts, raising the question of how this reduction affects the trade-off between MoE efficiency and performance. Our findings indicate that while deploying MoE models presents greater challenges, it also offers significant optimization opportunities. Reducing the number of activated experts can lead to substantial efficiency improvements in certain scenarios, with only minor performance degradation. Reducing the total number of experts provides limited efficiency gains but results in severe performance degradation. Our method can increase throughput by at least 10\% without any performance degradation. Overall, we conclude that MoE inference optimization remains an area with substantial potential for exploration and improvement.

cs.CL↗

arXiv2025

Depth as Points: Center Point-based Depth Estimation

The perception of vehicles and pedestrians in urban scenarios is crucial for autonomous driving. This process typically involves complicated data collection, imposes high computational and hardware demands. To address these limitations, we first develop a highly efficient method for generating virtual datasets, which enables the creation of task- and scenario-specific datasets in a short time. Leveraging this method, we construct the virtual depth estimation dataset VirDepth, a large-scale, multi-task autonomous driving dataset. Subsequently, we propose CenterDepth, a lightweight architecture for monocular depth estimation that ensures high operational efficiency and exhibits superior performance in depth estimation tasks with highly imbalanced height-scale distributions. CenterDepth integrates global semantic information through the innovative Center FC-CRFs algorithm, aggregates multi-scale features based on object key points, and enables detection-based depth estimation of targets. Experiments demonstrate that our proposed method achieves superior performance in terms of both computational speed and prediction accuracy.

cs.CV↗