arXiv subjects

Bo Pan

Publications and source records attributed to Bo Pan.

At least 37 records · Page 2Linked to original sources

arXiv2025

XGraphRAG: Interactive Visual Analysis for Graph-based Retrieval-Augmented Generation

Graph-based Retrieval-Augmented Generation (RAG) has shown great capability in enhancing Large Language Model (LLM)'s answer with an external knowledge base. Compared to traditional RAG, it introduces a graph as an intermediate representation to capture better structured relational knowledge in the corpus, elevating the precision and comprehensiveness of generation results. However, developers usually face challenges in analyzing the effectiveness of GraphRAG on their dataset due to GraphRAG's complex information processing pipeline and the overwhelming amount of LLM invocations involved during graph construction and query, which limits GraphRAG interpretability and accessibility. This research proposes a visual analysis framework that helps RAG developers identify critical recalls of GraphRAG and trace these recalls through the GraphRAG pipeline. Based on this framework, we develop XGraphRAG, a prototype system incorporating a set of interactive visualizations to facilitate users' analysis process, boosting failure cases collection and improvement opportunities identification. Our evaluation demonstrates the effectiveness and usability of our approach. Our work is open-sourced and available at https://github.com/Gk0Wk/XGraphRAG.

cs.IR↗

arXiv2025

GraphNarrator: Generating Textual Explanations for Graph Neural Networks

Graph representation learning has garnered significant attention due to its broad applications in various domains, such as recommendation systems and social network analysis. Despite advancements in graph learning methods, challenges still remain in explainability when graphs are associated with semantic features. In this paper, we present GraphNarrator, the first method designed to generate natural language explanations for Graph Neural Networks. GraphNarrator employs a generative language model that maps input-output pairs to explanations reflecting the model's decision-making process. To address the lack of ground truth explanations to train the model, we propose first generating pseudo-labels that capture the model's decisions from saliency-based explanations, then using Expert Iteration to iteratively train the pseudo-label generator based on training objectives on explanation quality. The high-quality pseudo-labels are finally utilized to train an end-to-end explanation generator model. Extensive experiments are conducted to demonstrate the effectiveness of GraphNarrator in producing faithful, concise, and human-preferred natural language explanations.

cs.LG↗

arXiv2025

Can Past Experience Accelerate LLM Reasoning?

Allocating more compute to large language models (LLMs) reasoning has generally been demonstrated to improve their effectiveness, but also results in increased inference time. In contrast, humans can perform tasks faster and better with increased experience and exposure. Hence, this paper aims to investigate the question: Can LLMs also become faster at reasoning through recurrent exposure on relevant tasks, and if so, how can it be achieved? To address these questions, we first formalize the problem setting of LLM reasoning speedup systematically in the dimensions of task relevancy and compute budget calculation. We then propose SpeedupLLM, a theoretically guaranteed framework to implement and benchmark such reasoning speedup behaviour based on adaptive compute allocation and memory mechanisms. We further conduct comprehensive experiments to benchmark such behaviour across different question similarity levels, memory methods, and reasoning methods. Results show that LLMs can generally reason faster with past experience, achieving up to a 56% reduction in compute cost when equipped with appropriate memory and reasoning methods.

cs.LG↗

arXiv2025

Saliency-Bench: A Comprehensive Benchmark for Evaluating Visual Explanations

Explainable AI (XAI) has gained significant attention for providing insights into the decision-making processes of deep learning models, particularly for image classification tasks through visual explanations visualized by saliency maps. Despite their success, challenges remain due to the lack of annotated datasets and standardized evaluation pipelines. In this paper, we introduce Saliency-Bench, a novel benchmark suite designed to evaluate visual explanations generated by saliency methods across multiple datasets. We curated, constructed, and annotated eight datasets, each covering diverse tasks such as scene classification, cancer diagnosis, object classification, and action classification, with corresponding ground-truth explanations. The benchmark includes a standardized and unified evaluation pipeline for assessing faithfulness and alignment of the visual explanation, providing a holistic visual explanation performance assessment. We benchmark these eight datasets with widely used saliency methods on different image classifier architectures to evaluate explanation quality. Additionally, we developed an easy-to-use API for automating the evaluation pipeline, from data accessing, and data loading, to result evaluation. The benchmark is available via our website: https://xaidataset.github.io.

cs.CV↗

arXiv2024

Frictional Adhesive Contact of Multiferroic Coatings Based on the Hybrid Element Method

We study the frictional adhesive contact of a rigid insulating sphere sliding past a multiferroic coating deposed onto a rigid substrate, based on the hybrid element method (HEM). The adhesion behavior is described based on the Maugis-Dugdale (MD) model. The adhesion-driven conjugate gradient method (AD-CGM) is employed to calculate the distribution of unknown pressures, while the discrete convolution-fast Fourier transform (DC-FFT) is utilized to compute the deformations, surface electric and magnetic potentials as well as the subsurface stresses, electric displacements, and magnetic inductions. We found that the coating thickness affect the contact stiffness and the interplay between friction and adhesion. More importantly, friction and gap-dependent MD adhesion affects elastic, electric, and magnetic behavior of the interface, breaking the symmetry between leading and trailing edges behaviors in all the investigated fields. Indeed, increasing the friction coefficient, the contact shape is no longer circular, the pressure distribution shifts towards the leading edge, the electric/magnetic surface potentials distributions sharpen at the leading edge, and the subsurface stress fields concentrates at the trailing edges.

cond-mat.soft↗

arXiv2024

MEGL: Multimodal Explanation-Guided Learning

Explaining the decision-making processes of Artificial Intelligence (AI) models is crucial for addressing their "black box" nature, particularly in tasks like image classification. Traditional eXplainable AI (XAI) methods typically rely on unimodal explanations, either visual or textual, each with inherent limitations. Visual explanations highlight key regions but often lack rationale, while textual explanations provide context without spatial grounding. Further, both explanation types can be inconsistent or incomplete, limiting their reliability. To address these challenges, we propose a novel Multimodal Explanation-Guided Learning (MEGL) framework that leverages both visual and textual explanations to enhance model interpretability and improve classification performance. Our Saliency-Driven Textual Grounding (SDTG) approach integrates spatial information from visual explanations into textual rationales, providing spatially grounded and contextually rich explanations. Additionally, we introduce Textual Supervision on Visual Explanations to align visual explanations with textual rationales, even in cases where ground truth visual annotations are missing. A Visual Explanation Distribution Consistency loss further reinforces visual coherence by aligning the generated visual explanations with dataset-level patterns, enabling the model to effectively learn from incomplete multimodal supervision. We validate MEGL on two new datasets, Object-ME and Action-ME, for image classification with multimodal explanations. Experimental results demonstrate that MEGL outperforms previous approaches in prediction accuracy and explanation quality across both visual and textual domains. Our code will be made available upon the acceptance of the paper.

cs.CV↗

arXiv2024

Costal Cartilage Segmentation with Topology Guided Deformable Mamba: Method and Benchmark

Costal cartilage segmentation is crucial to various medical applications, necessitating precise and reliable techniques due to its complex anatomy and the importance of accurate diagnosis and surgical planning. We propose a novel deep learning-based approach called topology-guided deformable Mamba (TGDM) for costal cartilage segmentation. The TGDM is tailored to capture the intricate long-range costal cartilage relationships. Our method leverages a deformable model that integrates topological priors to enhance the adaptability and accuracy of the segmentation process. Furthermore, we developed a comprehensive benchmark that contains 165 cases for costal cartilage segmentation. This benchmark sets a new standard for evaluating costal cartilage segmentation techniques and provides a valuable resource for future research. Extensive experiments conducted on both in-domain benchmarks and out-of domain test sets demonstrate the superiority of our approach over existing methods, showing significant improvements in segmentation precision and robustness.

eess.IV↗

arXiv2024

Distilling Large Language Models for Text-Attributed Graph Learning

Text-Attributed Graphs (TAGs) are graphs of connected textual documents. Graph models can efficiently learn TAGs, but their training heavily relies on human-annotated labels, which are scarce or even unavailable in many applications. Large language models (LLMs) have recently demonstrated remarkable capabilities in few-shot and zero-shot TAG learning, but they suffer from scalability, cost, and privacy issues. Therefore, in this work, we focus on synergizing LLMs and graph models with their complementary strengths by distilling the power of LLMs to a local graph model on TAG learning. To address the inherent gaps between LLMs (generative models for texts) and graph models (discriminative models for graphs), we propose first to let LLMs teach an interpreter with rich textual rationale and then let a student model mimic the interpreter's reasoning without LLMs' textual rationale. Extensive experiments validate the efficacy of our proposed framework.

cs.CL↗

arXiv2024

TAGA: Text-Attributed Graph Self-Supervised Learning by Synergizing Graph and Text Mutual Transformations

Text-Attributed Graphs (TAGs) enhance graph structures with natural language descriptions, enabling detailed representation of data and their relationships across a broad spectrum of real-world scenarios. Despite the potential for deeper insights, existing TAG representation learning primarily relies on supervised methods, necessitating extensive labeled data and limiting applicability across diverse contexts. This paper introduces a new self-supervised learning framework, Text-And-Graph Multi-View Alignment (TAGA), which overcomes these constraints by integrating TAGs' structural and semantic dimensions. TAGA constructs two complementary views: Text-of-Graph view, which organizes node texts into structured documents based on graph topology, and the Graph-of-Text view, which converts textual nodes and connections into graph data. By aligning representations from both views, TAGA captures joint textual and structural information. In addition, a novel structure-preserving random walk algorithm is proposed for efficient training on large-sized TAGs. Our framework demonstrates strong performance in zero-shot and few-shot scenarios across eight real-world datasets.

cs.LG↗

arXiv2024

Visual Attention Prompted Prediction and Learning

Visual explanation (attention)-guided learning uses not only labels but also explanations to guide model reasoning process. While visual attention-guided learning has shown promising results, it requires a large number of explanation annotations that are time-consuming to prepare. However, in many real-world situations, it is usually desired to prompt the model with visual attention without model retraining. For example, when doing AI-assisted cancer classification on a medical image, users (e.g., clinicians) can provide the AI model with visual attention prompt on which areas are indispensable and which are precluded. Despite its promising objectives, achieving visual attention-prompted prediction presents several major challenges: 1) How can the visual prompt be effectively integrated into the model's reasoning process? 2) How should the model handle samples that lack visual prompts? 3) What is the impact on the model's performance when a visual prompt is imperfect? This paper introduces a novel framework for attention-prompted prediction and learning, utilizing visual prompts to steer the model's reasoning process. To improve performance in non-prompted situations and align it with prompted scenarios, we propose a co-training approach for both non-prompted and prompted models, ensuring they share similar parameters and activations. Additionally, for instances where the visual prompt does not encompass the entire input image, we have developed innovative attention prompt refinement methods. These methods interpolate the incomplete prompts while maintaining alignment with the model's explanations. Extensive experiments on four datasets demonstrate the effectiveness of our proposed framework in enhancing predictions for samples both with and without prompt.

cs.CV↗

arXiv2024

Explaining latent representations of generative models with large multimodal models

Learning interpretable representations of data generative latent factors is an important topic for the development of artificial intelligence. With the rise of the large multimodal model, it can align images with text to generate answers. In this work, we propose a framework to comprehensively explain each latent variable in the generative models using a large multimodal model. We further measure the uncertainty of our generated explanations, quantitatively evaluate the performance of explanation generation among multiple large multimodal models, and qualitatively visualize the variations of each latent variable to learn the disentanglement effects of different generative models on explanations. Finally, we discuss the explanatory capabilities and limitations of state-of-the-art large multimodal models.

cs.LG↗

arXiv2024

AgentCoord: Visually Exploring Coordination Strategy for LLM-based Multi-Agent Collaboration

The potential of automatic task-solving through Large Language Model (LLM)-based multi-agent collaboration has recently garnered widespread attention from both the research community and industry. While utilizing natural language to coordinate multiple agents presents a promising avenue for democratizing agent technology for general users, designing coordination strategies remains challenging with existing coordination frameworks. This difficulty stems from the inherent ambiguity of natural language for specifying the collaboration process and the significant cognitive effort required to extract crucial information (e.g. agent relationship, task dependency, result correspondence) from a vast amount of text-form content during exploration. In this work, we present a visual exploration framework to facilitate the design of coordination strategies in multi-agent collaboration. We first establish a structured representation for LLM-based multi-agent coordination strategy to regularize the ambiguity of natural language. Based on this structure, we devise a three-stage generation method that leverages LLMs to convert a user's general goal into an executable initial coordination strategy. Users can further intervene at any stage of the generation process, utilizing LLMs and a set of interactions to explore alternative strategies. Whenever a satisfactory strategy is identified, users can commence the collaboration and examine the visually enhanced execution result. We develop AgentCoord, a prototype interactive system, and conduct a formal user study to demonstrate the feasibility and effectiveness of our approach.

cs.HC↗

arXiv2024

MaterialsMap: A CALPHAD-Based Tool to Design Composition Pathways through feasibility map for Desired Dissimilar Materials, demonstrated with RSW Joining of Ag-Al-Cu

Assembly of dissimilar metals can be achieved by different methods, for example, casting, welding, and additive manufacturing (AM). However, undesired phases formed in liquid-phase assembling processes due to solute segregation during solidification diminish mechanical and other properties of the processed parts. In the present work, an open-source software named MaterialsMap, has been developed based on the CALculation of Phase Diagrams (CALPHAD) approach. The primary objective of MaterialsMap is to facilitate the design of an optimal composition pathway for assembling dissimilar alloys with liquid-phases based on the formation of desired and undesired phases along the pathway. In MaterialsMap, equilibrium thermodynamic calculations are used to predict equilibrium phases formed at slow cooling rate, while Scheil-Gulliver simulations are employed to predict non-equilibrium phases formed during rapid cooling. By combining these two simulations, MaterialsMap offers a thorough guide for understanding phase formation in various manufacturing processes, assisting users in making informed decisions during material selection and production. As a demonstration of this approach, a compositional pathway was designed from pure Al to pure Cu through Ag using MaterialsMap. The design was experimentally verified using resistance spot welding (RSW).

cond-mat.mtrl-sci↗

arXiv2024

Controllable Data Generation by Deep Learning: A Review

Designing and generating new data under targeted properties has been attracting various critical applications such as molecule design, image editing and speech synthesis. Traditional hand-crafted approaches heavily rely on expertise experience and intensive human efforts, yet still suffer from the insufficiency of scientific knowledge and low throughput to support effective and efficient data generation. Recently, the advancement of deep learning has created the opportunity for expressive methods to learn the underlying representation and properties of data. Such capability provides new ways of determining the mutual relationship between the structural patterns and functional properties of the data and leveraging such relationships to generate structural data, given the desired properties. This article is a systematic review that explains this promising research area, commonly known as controllable deep data generation. First, the article raises the potential challenges and provides preliminaries. Then the article formally defines controllable deep data generation, proposes a taxonomy on various techniques and summarizes the evaluation metrics in this specific domain. After that, the article introduces exciting applications of controllable deep data generation, experimentally analyzes and compares existing works. Finally, this article highlights the promising future directions of controllable deep data generation and identifies five potential challenges.

cs.LG↗

arXiv2024

ELAD: Explanation-Guided Large Language Models Active Distillation

The deployment and application of Large Language Models (LLMs) is hindered by their memory inefficiency, computational demands, and the high costs of API inferences. Traditional distillation methods, which transfer the capabilities of LLMs to smaller models, often fail to determine whether the knowledge has been sufficiently transferred, potentially resulting in high costs or incomplete distillation. In this paper, we propose an Explanation-Guided LLMs Active Distillation (ELAD) framework that employs an active learning strategy to optimize the balance between annotation costs and model performance. To improve efficient sample selection, we introduce an explanation-guided sample selection method that identifies samples challenging its reasoning by exploiting uncertainties in explanation steps. Additionally, we present a customized LLM-annotated explanation revision technique where the teacher model detects and corrects flaws in the student model's reasoning. Our experiments across various reasoning datasets demonstrate that our framework significantly enhances the efficiency of LLM knowledge distillation.

cs.CL↗

arXiv2024

AgentLens: Visual Analysis for Agent Behaviors in LLM-based Autonomous Systems

Recently, Large Language Model based Autonomous system(LLMAS) has gained great popularity for its potential to simulate complicated behaviors of human societies. One of its main challenges is to present and analyze the dynamic events evolution of LLMAS. In this work, we present a visualization approach to explore detailed statuses and agents' behavior within LLMAS. We propose a general pipeline that establishes a behavior structure from raw LLMAS execution events, leverages a behavior summarization algorithm to construct a hierarchical summary of the entire structure in terms of time sequence, and a cause trace method to mine the causal relationship between agent behaviors. We then develop AgentLens, a visual analysis system that leverages a hierarchical temporal visualization for illustrating the evolution of LLMAS, and supports users to interactively investigate details and causes of agents' behaviors. Two usage scenarios and a user study demonstrate the effectiveness and usability of our AgentLens.

cs.HC↗

arXiv2023

Controllable Data Generation Via Iterative Data-Property Mutual Mappings

Deep generative models have been widely used for their ability to generate realistic data samples in various areas, such as images, molecules, text, and speech. One major goal of data generation is controllability, namely to generate new data with desired properties. Despite growing interest in the area of controllable generation, significant challenges still remain, including 1) disentangling desired properties with unrelated latent variables, 2) out-of-distribution property control, and 3) objective optimization for out-of-distribution property control. To address these challenges, in this paper, we propose a general framework to enhance VAE-based data generators with property controllability and ensure disentanglement. Our proposed objective can be optimized on both data seen and unseen in the training set. We propose a training procedure to train the objective in a semi-supervised manner by iteratively conducting mutual mappings between the data and properties. The proposed framework is implemented on four VAE-based controllable generators to evaluate its performance on property error, disentanglement, generation quality, and training time. The results indicate that our proposed framework enables more precise control over the properties of generated samples in a short training time, ensuring the disentanglement and keeping the validity of the generated samples.

cs.LG↗

arXiv2023

SurroCBM: Concept Bottleneck Surrogate Models for Generative Post-hoc Explanation

Explainable AI seeks to bring light to the decision-making processes of black-box models. Traditional saliency-based methods, while highlighting influential data segments, often lack semantic understanding. Recent advancements, such as Concept Activation Vectors (CAVs) and Concept Bottleneck Models (CBMs), offer concept-based explanations but necessitate human-defined concepts. However, human-annotated concepts are expensive to attain. This paper introduces the Concept Bottleneck Surrogate Models (SurroCBM), a novel framework that aims to explain the black-box models with automatically discovered concepts. SurroCBM identifies shared and unique concepts across various black-box models and employs an explainable surrogate model for post-hoc explanations. An effective training strategy using self-generated data is proposed to enhance explanation quality continuously. Through extensive experiments, we demonstrate the efficacy of SurroCBM in concept discovery and explanation, underscoring its potential in advancing the field of explainable AI.

cs.AI↗