arXiv subjects

Bogumił Kamiński

Publications and source records attributed to Bogumił Kamiński.

14 recordsLinked to original sources

arXiv2026

Graph Data Augmentation via Contrastive Generator Inversion ($\texttt{DCBA}$)

Graphs provide a natural representation of many complex systems, ranging from social platforms to ecosystems. However, the development of graph-based machine learning methods is often constrained by the limited availability of large and diverse graph datasets. In this paper, we introduce $\texttt{DCBA}$, a model-based approach to graph data augmentation that infers the configuration of a synthetic graph generator from an observed network. We instantiate the proposed framework using the $\texttt{ABCD}$ generator, which produces scale-free networks with community structure. Our model learns a joint representation of graphs and generator parametrisations using a multi-positive contrastive objective with soft negative weighting. The learned representation enables the prediction of an $\texttt{ABCD}$ configuration whose stochastic realisations preserve the macrostructural properties encoded by the generator. Experiments show that $\texttt{DCBA}$ recovers generator parameters more accurately and robustly than an algorithmic inverse-modelling baseline. Its downstream utility is further demonstrated in community detection, where inferred configurations used to fine-tune $\texttt{PRoCD}$ improve AMI on average by $161\%$ on synthetic and $273\%$ on real-world networks.

cs.LG↗

arXiv2026

Twinning Complex Networked Systems: Data-Driven Calibration of the mABCD Synthetic Graph Generator

The increasing availability of relational data has contributed to a growing reliance on network-based representations of complex systems. Over time, these models have evolved to capture more nuanced properties, such as the heterogeneity of relationships, leading to the concept of multilayer networks. However, the analysis and evaluation of methods for these structures is often hindered by the limited availability of large-scale empirical data. As a result, graph generators are commonly used as a workaround, albeit at the cost of introducing systematic biases. In this paper, we address the inverse-generator problem by inferring the configuration parameters of a multilayer network generator, \mABCD, from a real-world system. Our goal is to identify parameter settings that enable the generator to produce synthetic networks that act as digital twins of the original structure. We propose a method for estimating matching configurations and for quantifying the associated error. Our results demonstrate that this task is non-trivial, as strong interdependencies between configuration parameters weaken independent estimation and instead favour a joint-prediction approach.

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arXiv2025

The Artificial Benchmark for Community Detection with Outliers and Overlapping Communities (ABCD+$o^2$)

The Artificial Benchmark for Community Detection (ABCD) graph is a random graph model with community structure and power-law distribution for both degrees and community sizes. The model generates graphs similar to the well-known LFR model but it is faster, more interpretable, and can be investigated analytically. In this paper, we use the underlying ingredients of the ABCD model, and its generalization to include outliers (ABCD+$o$), and introduce another variant that allows for overlapping communities, ABCD+$o^2$.

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arXiv2025

Multilayer Artificial Benchmark for Community Detection (mABCD)

One of the most persistent challenges in network science is the development of various synthetic graph models to support subsequent analyses. Among the most notable frameworks addressing this issue is the Artificial Benchmark for Community Detection (ABCD) model, a random graph model with community structure and power-law distribution for both degrees and community sizes. The model generates graphs similar to the well-known LFR model but it is faster, more interpretable, and can be investigated analytically. In this paper, we use the underlying ingredients of ABCD and introduce its variant, mABCD, thereby addressing the gap in models capable of generating multilayer networks. The uniqueness of the proposed approach lies in its flexibility at both levels of modelling: the internal structure of individual layers and the inter-layer dependencies, which together make the network a coherent structure rather than a collection of loosely coupled graphs. In addition to the conceptual description of the framework, we provide a comprehensive analysis of its efficient Julia implementation. Finally, we illustrate the applicability of mABCD to one of the most prominent problems in the area of complex systems: spreading phenomena analysis.

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arXiv2025

Improving community detection via community association strength scores

Community detection methods play a central role in understanding complex networks by revealing highly connected subsets of entities. However, most community detection algorithms generate partitions of the nodes, thus (i) forcing every node to be part of a community and (ii) ignoring the possibility that some nodes may be part of multiple communities. In our work, we investigate three simple community association strength (CAS) scores and their usefulness as post-processing tools given some partition of the nodes. We show that these measures can be used to improve node partitions, detect outlier nodes (not part of any community), and help find nodes with multiple community memberships.

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arXiv2024

Modularity Based Community Detection in Hypergraphs

In this paper, we propose a scalable community detection algorithm using hypergraph modularity function, h-Louvain. It is an adaptation of the classical Louvain algorithm in the context of hypergraphs. We observe that a direct application of the Louvain algorithm to optimize the hypergraph modularity function often fails to find meaningful communities. We propose a solution to this issue by adjusting the initial stage of the algorithm via carefully and dynamically tuned linear combination of the graph modularity function of the corresponding two-section graph and the desired hypergraph modularity function. The process is guided by Bayesian optimization of the hyper-parameters of the proposed procedure. Various experiments on synthetic as well as real-world networks are performed showing that this process yields improved results in various regimes.

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arXiv2024

Predicting Properties of Nodes via Community-Aware Features

This paper shows how information about the network's community structure can be used to define node features with high predictive power for classification tasks. To do so, we define a family of community-aware node features and investigate their properties. Those features are designed to ensure that they can be efficiently computed even for large graphs. We show that community-aware node features contain information that cannot be completely recovered by classical node features or node embeddings (both classical and structural) and bring value in node classification tasks. This is verified for various classification tasks on synthetic and real-life networks.

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arXiv2023

Hypergraph Artificial Benchmark for Community Detection (h-ABCD)

The Artificial Benchmark for Community Detection (ABCD) graph is a recently introduced random graph model with community structure and power-law distribution for both degrees and community sizes. The model generates graphs with similar properties as the well-known LFR one, and its main parameter can be tuned to mimic its counterpart in the LFR model, the mixing parameter. In this paper, we introduce hypergraph counterpart of the ABCD model, h-ABCD, which produces random hypergraph with distributions of ground-truth community sizes and degrees following power-law. As in the original ABCD, the new model h-ABCD can produce hypergraphs with various levels of noise. More importantly, the model is flexible and can mimic any desired level of homogeneity of hyperedges that fall into one community. As a result, it can be used as a suitable, synthetic playground for analyzing and tuning hypergraph community detection algorithms.

cs.SI↗

arXiv2023

Artificial Benchmark for Community Detection with Outliers (ABCD+o)

The Artificial Benchmark for Community Detection graph (ABCD) is a random graph model with community structure and power-law distribution for both degrees and community sizes. The model generates graphs with similar properties as the well-known LFR one, and its main parameter $ξ$ can be tuned to mimic its counterpart in the LFR model, the mixing parameter $μ$. In this paper, we extend the ABCD model to include potential outliers. We perform some exploratory experiments on both the new ABCD+o model as well as a real-world network to show that outliers possess some desired, distinguishable properties.

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arXiv2022

Properties and Performance of the ABCDe Random Graph Model with Community Structure

In this paper, we investigate properties and performance of synthetic random graph models with a built-in community structure. Such models are important for evaluating and tuning community detection algorithms that are unsupervised by nature. We propose ABCDe, a multi-threaded implementation of the ABCD (Artificial Benchmark for Community Detection) graph generator. We discuss the implementation details of the algorithm and compare it with both the previously available sequential version of the ABCD model and with the parallel implementation of the standard and extensively used LFR (Lancichinetti--Fortunato--Radicchi) generator. We show that ABCDe is more than ten times faster and scales better than the parallel implementation of LFR provided in NetworKit. Moreover, the algorithm is not only faster but random graphs generated by ABCD have similar properties to the ones generated by the original LFR algorithm, while the parallelized NetworKit implementation of LFR produces graphs that have noticeably different characteristics.

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arXiv2022

Evaluating Node Embeddings of Complex Networks

Graph embedding is a transformation of nodes of a graph into a set of vectors. A~good embedding should capture the graph topology, node-to-node relationship, and other relevant information about the graph, its subgraphs, and nodes. If these objectives are achieved, an embedding is a meaningful, understandable, compressed representations of a network that can be used for other machine learning tools such as node classification, community detection, or link prediction. The main challenge is that one needs to make sure that embeddings describe the properties of the graphs well. As a result, selecting the best embedding is a challenging task and very often requires domain experts. In this paper, we do a series of extensive experiments with selected graph embedding algorithms, both on real-world networks as well as artificially generated ones. Based on those experiments we formulate two general conclusions. First, if one needs to pick one embedding algorithm before running the experiments, then node2vec is the best choice as it performed best in our tests. Having said that, there is no single winner in all tests and, additionally, most embedding algorithms have hyperparameters that should be tuned and are randomized. Therefore, our main recommendation for practitioners is, if possible, to generate several embeddings for a problem at hand and then use a general framework that provides a tool for an unsupervised graph embedding comparison. This framework (introduced recently in the literature and easily available on GitHub repository) assigns the divergence score to embeddings to help distinguish good ones from bad ones.

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arXiv2021

A Multi-purposed Unsupervised Framework for Comparing Embeddings of Undirected and Directed Graphs

Graph embedding is a transformation of nodes of a network into a set of vectors. A good embedding should capture the underlying graph topology and structure, node-to-node relationship, and other relevant information about the graph, its subgraphs, and nodes themselves. If these objectives are achieved, an embedding is a meaningful, understandable, and often compressed representation of a network. Unfortunately, selecting the best embedding is a challenging task and very often requires domain experts. In this paper, we extend the framework for evaluating graph embeddings that was recently introduced by the authors. Now, the framework assigns two scores, local and global, to each embedding that measure the quality of an evaluated embedding for tasks that require good representation of local and, respectively, global properties of the network. The best embedding, if needed, can be selected in an unsupervised way, or the framework can identify a few embeddings that are worth further investigation. The framework is flexible, scalable, and can deal with undirected/directed, weighted/unweighted graphs.

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arXiv2020

Analyzing, Exploring, and Visualizing Complex Networks via Hypergraphs using SimpleHypergraphs.jl

Real-world complex networks are usually being modeled as graphs. The concept of graphs assumes that the relations within the network are binary (for instance, between pairs of nodes); however, this is not always true for many real-life scenarios, such as peer-to-peer communication schemes, paper co-authorship, or social network interactions. For such scenarios, it is often the case that the underlying network is better and more naturally modeled by hypergraphs. A hypergraph is a generalization of a graph in which a single (hyper)edge can connect any number of vertices. Hypergraphs allow modelers to have a complete representation of multi-relational (many-to-many) networks; hence, they are extremely suitable for analyzing and discovering more subtle dependencies in such data structures. Working with hypergraphs requires new software libraries that make it possible to perform operations on them, from basic algorithms (such as searching or traversing the network) to computing significant hypergraph measures, to including more challenging algorithms (such as community detection). In this paper, we present a new software library, SimpleHypergraphs.jl, written in the Julia language and designed for high-performance computing on hypergraphs and propose two new algorithms for analyzing their properties: s-betweenness and modified label propagation. We also present various approaches for hypergraph visualization integrated into our tool. In order to demonstrate how to exploit the library in practice, we discuss two case studies based on the 2019 Yelp Challenge dataset and the collaboration network built upon the Game of Thrones TV series. The results are promising and they confirm the ability of hypergraphs to provide more insight than standard graph-based approaches.

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arXiv2020

Artificial Benchmark for Community Detection (ABCD): Fast Random Graph Model with Community Structure

Most of the current complex networks that are of interest to practitioners possess a certain community structure that plays an important role in understanding the properties of these networks. Moreover, many machine learning algorithms and tools that are developed for complex networks try to take advantage of the existence of communities to improve their performance or speed. As a result, there are many competing algorithms for detecting communities in large networks. Unfortunately, these algorithms are often quite sensitive and so they cannot be fine-tuned for a given, but a constantly changing, real-world network at hand. It is therefore important to test these algorithms for various scenarios that can only be done using synthetic graphs that have built-in community structure, power-law degree distribution, and other typical properties observed in complex networks. The standard and extensively used method for generating artificial networks is the LFR graph generator. Unfortunately, this model has some scalability limitations and it is challenging to analyze it theoretically. Finally, the mixing parameter $μ$, the main parameter of the model guiding the strength of the communities, has a non-obvious interpretation and so can lead to unnaturally-defined networks. In this paper, we provide an alternative random graph model with community structure and power-law distribution for both degrees and community sizes, the Artificial Benchmark for Community Detection (ABCD). We show that the new model solves the three issues identified above and more. The conclusion is that these models produce comparable graphs but ABCD is fast, simple, and can be easily tuned to allow the user to make a smooth transition between the two extremes: pure (independent) communities and random graph with no community structure.

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