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Boutheïna Kerkeni

Publications and source records attributed to Boutheïna Kerkeni.

3 recordsLinked to original sources

Reaction Mechanisms and Kinetics of CN and CCH with H2CS: Implications for Interstellar Sulfur Chemistry

We report an ab initio and master-equation investigation of the gas-phase reactions of thioformaldehyde (H2CS) with CN and CCH radicals, motivated by the recent detection of the S-containing species HCSCN and HCSCCH in cold interstellar environments. Structures and frequencies were obtained at the DSD-PBEP86/aug-cc-pVTZ level, with energetics refined by CCSD(T)-F12a calculations and kinetics treated using an energy-grained master equation. The CN + H2CS reaction proceeds through orientation-dependent entrance channels. Two barrierless addition pathways lead to a connected multi-well network that preferentially forms cyano thioformaldehyde, HCSCN + H, whereas abstraction-type channels leading to HNC + HCS or HCN + HCS contribute only marginally. The calculated kinetics indicate capture-controlled low-temperature reactivity and a strong preference for HCSCN formation, suggesting that this reaction should be considered in astrochemical models of cold clouds. For CCH + H2CS, barrierless capture gives access to two connected entrance adducts. Although the cyclic product is the most exothermic channel, its formation is kinetically hindered by a high-lying late transition state. The flux is shared between propynethial formation, HCSCCH + H, and the HCCH + HCS channel, with the latter being favored. These results show that subtle differences in radical structure, bonding preferences, and entrance-channel topology strongly affect product branching in S-containing radical-molecule reactions. The computed mechanisms and rate coefficients provide useful input for astrochemical models of sulfur chemistry in cold molecular clouds and for interpreting recent molecular detections in sources such as TMC-1.

astro-ph.GA↗

Probing computational methodologies in predicting mid-infrared spectra for large polycyclic aromatic hydrocarbons

We extend the prediction of vibrational spectra to large sized polycyclic aromatic hydrocarbon (PAH) molecules comprising up to \sim 1500 carbon atoms by evaluating the efficiency of several computational chemistry methodologies. We employ classical mechanics methods (Amber and Gaff) with improved atomic point charges, semi-empirical (PM3, and density functional tight binding), and density functional theory (B3LYP) and conduct global optimizations and frequency calculations in order to investigate the impact of PAH size on the vibrational band positions. We primarily focus on the following mid-infrared emission bands 3.3, 6.2, 7.7, 8.6, 11.3, 12.7, and 17.0 microns. We developed a general Frequency Scaling Function (FSF) to shift the bands and to provide a systematic comparison versus the three methods for each PAH. We first validate this procedure on IR scaled spectra from the NASA Ames PAH Database, and extend it to new large PAHs. We show that when the FSF is applied to the Amber and Gaff IR spectra, an agreement between the normal mode peak positions with those inferred from the B3LYP/4-31G model chemistry is achieved. As calculations become time intensive for large sized molecules Nc > 450, this proposed methodology has advantages. The FSF has enabled extending the investigations to large PAHs where we clearly see the emergence of the 17.0 microns feature, and the weakening of the 3.3 microns one. We finally investigate the trends in the 3.3 microns 17.0 microns PAH band ratio as a function of PAH size and its response following the exposure to fields of varying radiation intensities.

astro-ph.GA↗

Peptide Bonds in the Interstellar Medium: Facile Autocatalytic Formation from Nitriles on Water-Ice Grains

A recent suggestion that acetamide, \ce{CH3C(O)NH2}, could be readily formed on water-ice grains by the acid induced addition of water across the \ce{CN} bond is now shown to be valid. Computational modelling of the reaction between \ce{R-CN} (R = H, \ce{CH3}) and a cluster of 32 molecules of water and one \ce{H3O+} proceeds auto-catalytically to form firstly a hydroxy imine \ce{R-C(OH)=NH} and secondly an amide \ce{R-C(O)NH2}. Quantum mechanical tunnelling, computed from small-curvature estimates, plays a key role in the rates of these reactions. This work represents the first credible effort to show how amides can be formed from abundant substrates, namely nitriles and water, reacting on a water-ice cluster containing catalytic amounts of hydrons in the interstellar medium with consequential implications towards the origins of life.

astro-ph.GA↗