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Bradley Baker

Publications and source records attributed to Bradley Baker.

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Complex-valued Phase Synchrony Reveals Directional Coupling in FMRI and Tracks Medication Effects

Understanding interactions in complex systems requires capturing the relative timing of coupling, not only its strength. Phase synchronization captures this timing, yet most methods either reduce the phase to its cosine or collapse it into scalar indices such as the phase-locking value, discarding relative timing. We propose a complex-valued phase synchrony (CVPS) framework that estimates phase with an adaptive Gabor wavelet and preserves both cosine and sine components. Simulations confirm that CVPS recovers true phase offsets and tracks non-stationary dynamics more faithfully than Hilbert-based methods. Because antipsychotics are known to modulate the timing of cortical interactions, they provide a rigorous context to evaluate whether CVPS can capture such pharmacological effects. CVPS further reveals cortical neuro-hemodynamic drivers, with occipital-to-parietal and prefrontal-to-striatal lead--lag flows consistent with known receptor targets, confirming its ability to capture pharmacological timing. CVPS, therefore, offers a robust, generalizable framework for detecting relative timing in complex systems such as the brain.

q-bio.NC

Improved Differentially Private Decentralized Source Separation for fMRI Data

Blind source separation algorithms such as independent component analysis (ICA) are widely used in the analysis of neuroimaging data. In order to leverage larger sample sizes, different data holders/sites may wish to collaboratively learn feature representations. However, such datasets are often privacy-sensitive, precluding centralized analyses that pool the data at a single site. In this work, we propose a differentially private algorithm for performing ICA in a decentralized data setting. Conventional approaches to decentralized differentially private algorithms may introduce too much noise due to the typically small sample sizes at each site. We propose a novel protocol that uses correlated noise to remedy this problem. We show that our algorithm outperforms existing approaches on synthetic and real neuroimaging datasets and demonstrate that it can sometimes reach the same level of utility as the corresponding non-private algorithm. This indicates that it is possible to have meaningful utility while preserving privacy.

stat.ML