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Bradley Greig

Publications and source records attributed to Bradley Greig.

At least 55 records · Page 3Linked to original sources

Methods of Error Estimation for Delay Power Spectra in $21\,\textrm{cm}$ Cosmology

Precise measurements of the 21 cm power spectrum are crucial for understanding the physical processes of hydrogen reionization. Currently, this probe is being pursued by low-frequency radio interferometer arrays. As these experiments come closer to making a first detection of the signal, error estimation will play an increasingly important role in setting robust measurements. Using the delay power spectrum approach, we have produced a critical examination of different ways that one can estimate error bars on the power spectrum. We do this through a synthesis of analytic work, simulations of toy models, and tests on small amounts of real data. We find that, although computed independently, the different error bar methodologies are in good agreement with each other in the noise-dominated regime of the power spectrum. For our preferred methodology, the predicted probability distribution function is consistent with the empirical noise power distributions from both simulated and real data. This diagnosis is mainly in support of the forthcoming HERA upper limit, and also is expected to be more generally applicable.

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Validation of the HERA Phase I Epoch of Reionization 21 cm Power Spectrum Software Pipeline

We describe the validation of the HERA Phase I software pipeline by a series of modular tests, building up to an end-to-end simulation. The philosophy of this approach is to validate the software and algorithms used in the Phase I upper limit analysis on wholly synthetic data satisfying the assumptions of that analysis, not addressing whether the actual data meet these assumptions. We discuss the organization of this validation approach, the specific modular tests performed, and the construction of the end-to-end simulations. We explicitly discuss the limitations in scope of the current simulation effort. With mock visibility data generated from a known analytic power spectrum and a wide range of realistic instrumental effects and foregrounds, we demonstrate that the current pipeline produces power spectrum estimates that are consistent with known analytic inputs to within thermal noise levels (at the 2 sigma level) for k > 0.2 h/Mpc for both bands and fields considered. Our input spectrum is intentionally amplified to enable a strong `detection' at k ~0.2 h/Mpc -- at the level of ~25 sigma -- with foregrounds dominating on larger scales, and thermal noise dominating at smaller scales. Our pipeline is able to detect this amplified input signal after suppressing foregrounds with a dynamic range (foreground to noise ratio) of > 10^7. Our validation test suite uncovered several sources of scale-independent signal loss throughout the pipeline, whose amplitude is well-characterized and accounted for in the final estimates. We conclude with a discussion of the steps required for the next round of data analysis.

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Epoch of reionization parameter estimation with the 21-cm bispectrum

We present the first application of the isosceles bispectrum to MCMC parameter inference from the cosmic 21-cm signal. We extend the MCMC sampler 21cmMC to use the fast bispectrum code, BiFFT, when computing the likelihood. We create mock 1000h observations with SKA1-low, using PyObs21 to account for uv-sampling and thermal noise. Assuming the spin temperature is much higher than that of the CMB, we consider two different reionization histories for our mock observations: fiducial and late-reionization. For both models we find that bias on the inferred parameter means and 1-$σ$ credible intervals can be substantially reduced by using the isosceles bispectrum (calculated for a wide range of scales and triangle shapes) together with the power spectrum (as opposed to just using one of the statistics). We find that making the simplifying assumption of a Gaussian likelihood with a diagonal covariance matrix does not notably bias parameter constraints for the three-parameter reionization model and basic instrumental effects considered here. This is true even if we use extreme (unlikely) initial conditions which would be expected to amplify biases. We also find that using the cosmic variance error calculated with Monte-Carlo simulations using the fiducial model parameters whilst assuming the late-reionization model for the simulated data also does not strongly bias the inference. This implies we may be able to sparsely sample and interpolate the cosmic variance error over the parameter space, substantially reducing computational costs. All codes used in this work are publicly-available.

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Stacking Redshifted 21cm Images of HII Regions Around High Redshift Galaxies as a Probe of Early Reionization

A number of current and future experiments aim to detect the reionization of neutral hydrogen by the first stars and galaxies in the Universe via the redshifted 21cm line. Using the \textsc{BlueTides} simulation, we investigate the measurement of an \textit{average} ionised region towards the beginning of reionization by stacking redshifted 21cm images around optically identified bright galaxies using mock observations. We find that with an SKA 1000 hour observation, assuming perfect foreground subtraction, a $5σ$ detection of a stacked HII region can be made with 30 images around some of the brightest galaxies in \textsc{bluetides} (brighter than $M_{UV} < -22.75$) at $z=9$ (corresponding to a neutral fraction of 90.1 \% in our model). We present simulated relationships between the UV magnitude of galaxies, the sizes of the ionised regions they reside in, and the shape of the stacked profiles. These mock observations can also distinguish between scenarios where the IGM is in net emission or absorption of 21cm photons. Once 21cm foreground contamination is included, we find that even with up to 200 images around these rare, bright galaxies, only a tentative $> 1σ$ detection will be possible. However, partial foreground subtraction substantially improves signal-to-noise. For example, we predict that reducing the area of Fourier space dominated by foregrounds by 50 (80) percent will allow $> 3σ$ ($> 5σ$) detections of ionised regions at $z=9$.

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Redundant-Baseline Calibration of the Hydrogen Epoch of Reionization Array

In 21 cm cosmology, precision calibration is key to the separation of the neutral hydrogen signal from very bright but spectrally-smooth astrophysical foregrounds. The Hydrogen Epoch of Reionization Array (HERA), an interferometer specialized for 21 cm cosmology and now under construction in South Africa, was designed to be largely calibrated using the self-consistency of repeated measurements of the same interferometric modes. This technique, known as "redundant-baseline calibration" resolves most of the internal degrees of freedom in the calibration problem. It assumes, however, on antenna elements with identical primary beams placed precisely on a redundant grid. In this work, we review the detailed implementation of the algorithms enabling redundant-baseline calibration and report results with HERA data. We quantify the effects of real-world non-redundancy and how they compare to the idealized scenario in which redundant measurements differ only in their noise realizations. Finally, we study how non-redundancy can produce spurious temporal structure in our calibration solutions--both in data and in simulations--and present strategies for mitigating that structure.

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21cmFAST v3: A Python-integrated C code forgenerating 3D realizations of the cosmic 21cm signal

This brief code paper presents a new Python-wrapped version of the popular 21cm cosmology simulator, 21cmFAST. The new version, v3+, maintains the same core functionality of previous versions of 21cmFAST, but features a simple and intuitive interface, and a great deal more flexibility. This evolution represents the work of a formalized collaboration, and the new version, available publicly on GitHub, provides a single point-of-reference for all future upgrades and community-added features. In this paper, we describe simple usage of 21cmFAST, some of its new features, and provide a simple performance benchmark.

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Reionization inference from the CMB optical depth and E-mode polarization power spectra

The Epoch of Reionization (EoR) depends on the complex astrophysics governing the birth and evolution of the first galaxies and structures in the intergalactic medium. EoR models rely on cosmic microwave background (CMB) observations, and in particular the large-scale E-mode polarization power spectra (EE PS), to help constrain their highly uncertain parameters. However, rather than directly forward-modelling the EE PS, most EoR models are constrained using a summary statistic -- the Thompson scattering optical depth, $τ_e$. Compressing CMB observations to $τ_e$ requires adopting a basis set for the EoR history. The common choice is the unphysical, redshift-symmetric hyperbolic tangent (Tanh) function, which differs in shape from physical EoR models based on hierarchical structure formation. Combining public EoR and CMB codes, 21cmFAST and CLASS, here we quantify how inference using the $τ_e$ summary statistic impacts the resulting constraints on galaxy properties and EoR histories. Using the last Planck 2018 data release, we show that the marginalized constraints on the EoR history are more sensitive to the choice of the basis set (Tanh vs physical model) than to the CMB likelihood statistic ($τ_e$ vs PS). For example, EoR histories implied by the growth of structure show a small tail of partial reionization extending to higher redshifts. However, biases in inference using $τ_e$ are negligible for the Planck 2018 data. Using EoR constraints from high-redshift observations including the quasar dark fraction, galaxy UV luminosity functions and CMB EE PS, our physical model recovers $τ_e=0.0569^{+0.0081}_{-0.0066}$.

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A tale of two sites -- II: Inferring the properties of minihalo-hosted galaxies with upcoming 21-cm interferometers

The first generation of galaxies is expected to form in minihalos, accreting gas through ${\rm H}_2$ cooling, and possessing unique properties. Although unlikely to be directly detected in UV/infrared surveys, the radiation from these molecular-cooling galaxies (MCGs) could leave an imprint in the 21-cm signal from the Cosmic Dawn. Here we quantify their detectability with upcoming radio interferometers. We generate mock 21-cm power spectra using a model for both MCGs as well as more massive, atomic-cooling galaxies (AGCs), allowing both populations to have different properties and scaling relations. The galaxy parameters are chosen so as to be consistent with: (i) high-redshift UV luminosity functions; (ii) the upper limit on the neutral fraction from QSO spectra; (iii) the Thomson scattering optical depth to the CMB; and (iv) the timing of the recent putative EDGES detection. The latter implies a significant contribution of MCGs to the Cosmic Dawn, if confirmed to be cosmological. We then perform Bayesian inference on two models including and ignoring MCG contributions. Comparing their Bayesian evidences, we find a strong preference for the model including MCGs, despite the fact that it has more free parameters. This suggests that if MCGs indeed play a significant role in the Cosmic Dawn, it should be possible to infer their properties from upcoming 21-cm power spectra. Our study illustrates how these observations can discriminate among uncertain galaxy formation models with varying complexities, by maximizing the Bayesian evidence.

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Understanding the HERA Phase I receiver system with simulations and its impact on the detectability of the EoR delay power spectrum

The detection of the Epoch of Reionization (EoR) delay power spectrum using a "foreground avoidance method" highly depends on the instrument chromaticity. The systematic effects induced by the radio-telescope spread the foreground signal in the delay domain, which contaminates the EoR window theoretically observable. Applied to the Hydrogen Epoch of Reionization Array (HERA), this paper combines detailed electromagnetic and electrical simulations in order to model the chromatic effects of the instrument, and quantify its frequency and time responses. In particular, the effects of the analogue receiver, transmission cables, and mutual coupling are included. These simulations are able to accurately predict the intensity of the reflections occurring in the 150-m cable which links the antenna to the back-end. They also show that electromagnetic waves can propagate from one dish to another one through large sections of the array due to mutual coupling. The simulated system time response is attenuated by a factor $10^{4}$ after a characteristic delay which depends on the size of the array and on the antenna position. Ultimately, the system response is attenuated by a factor $10^{5}$ after 1400 ns because of the reflections in the cable, which corresponds to characterizable ${k_\parallel}$-modes above 0.7 $h\;\rm{Mpc}^{-1}$ at 150 MHz. Thus, this new study shows that the detection of the EoR signal with HERA Phase I will be more challenging than expected. On the other hand, it improves our understanding of the telescope, which is essential to mitigate the instrument chromaticity.

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Exploring reionisation and high-z galaxy observables with recent multi-redshift MWA upper limits on the 21-cm signal

We use the latest multi-redshift ($z=6.5-8.7$) upper limits on the 21-cm signal from the Murchison Widefield Array (MWA) to explore astrophysical models which are inconsistent with the data. These upper limits are achieved using 298 h of carefully excised data over four observing seasons. To explore these upper limits in the context of reionisation astrophysics, we use 21CMMC. We then connect the disfavoured regions of parameter space to existing observational constraints on reionisation such as high-$z$ galaxy ultra-violet (UV) luminosity functions, background UV photoionisation rate, intergalactic medium (IGM) neutral fraction, the electron scattering optical depth and the soft-band X-ray emissivity. We find the vast majority of models disfavoured by the MWA limits are already inconsistent with existing observational constraints. These inconsistent models arise from two classes of models: (i) `cold' reionisation and (ii) pure matter density fluctuations (i.e. no reionisation). However, a small subsample of models are consistent implying the existing MWA limits provide unique information in disfavouring models of reionisation, albeit extremely weakly. We also provide the first limits on the soft-band X-ray emissivity from galaxies at high redshifts, finding $1σ$ lower limits of $ε_{{\rm X},0.5-2~{\rm keV}}\gtrsim10^{34.5}$ erg s$^{-1}$ Mpc$^{-3}$. Finally, we recover 95 per cent disfavoured limits on the IGM spin temperature of $\bar{T}_{\rm S}\lesssim$ 1.3, 1.4, 1.5, 1.8, 2.1, 2.4 K at $z=6.5, 6.8, 7.1, 7.8, 8.2, 8.7$. With this we infer the IGM must have undergone, at the very least, a small amount of X-ray heating. Note, the limits on $ε_{{\rm X},0.5-2~{\rm keV}}$ and $\bar{T}_{\rm S}$ are conditional on the IGM neutral fraction.

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Detection of Cosmic Structures using the Bispectrum Phase. II. First Results from Application to Cosmic Reionization Using the Hydrogen Epoch of Reionization Array

Characterizing the epoch of reionization (EoR) at $z\gtrsim 6$ via the redshifted 21 cm line of neutral Hydrogen (HI) is critical to modern astrophysics and cosmology, and thus a key science goal of many current and planned low-frequency radio telescopes. The primary challenge to detecting this signal is the overwhelmingly bright foreground emission at these frequencies, placing stringent requirements on the knowledge of the instruments and inaccuracies in analyses. Results from these experiments have largely been limited not by thermal sensitivity but by systematics, particularly caused by the inability to calibrate the instrument to high accuracy. The interferometric bispectrum phase is immune to antenna-based calibration and errors therein, and presents an independent alternative to detect the EoR HI fluctuations while largely avoiding calibration systematics. Here, we provide a demonstration of this technique on a subset of data from the Hydrogen Epoch of Reionization Array (HERA) to place approximate constraints on the brightness temperature of the intergalactic medium (IGM). From this limited data, at $z=7.7$ we infer "$1σ$" upper limits on the IGM brightness temperature to be $\le 316$ "pseudo" mK at $κ_\parallel=0.33$ "pseudo" $h$ Mpc$^{-1}$ (data-limited) and $\le 1000$ "pseudo" mK at $κ_\parallel=0.875$ "pseudo" $h$ Mpc$^{-1}$ (noise-limited). The "pseudo" units denote only an approximate and not an exact correspondence to the actual distance scales and brightness temperatures. By propagating models in parallel to the data analysis, we confirm that the dynamic range required to separate the cosmic HI signal from the foregrounds is similar to that in standard approaches, and the power spectrum of the bispectrum phase is still data-limited (at $\gtrsim 10^6$ dynamic range) indicating scope for further improvement in sensitivity as the array build-out continues.

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Interpreting LOFAR 21-cm signal upper limits at z~9.1 in the context of high-z galaxy and reionisation observations

Using the latest upper limits on the 21-cm power spectrum at $z\approx9.1$ from the Low Frequency Array (LOFAR), we explore regions of parameter space which are inconsistent with the data. We use 21CMMC, a Monte Carlo Markov Chain sampler of 21cmFAST which directly forward models the 3D cosmic 21-cm signal in a fully Bayesian framework. We use the astrophysical parameterisation from 21cmFAST, which includes mass-dependent star formation rates and ionising escape fractions as well as soft-band X-ray luminosities to place limits on the properties of the high-$z$ galaxies. Further, we connect the disfavoured regions of parameter space with existing observational constraints on the Epoch of Reionisation such as ultra-violet (UV) luminosity functions, background UV photoionisation rate, intergalactic medium (IGM) neutral fraction and the electron scattering optical depth. We find that all models exceeding the 21-cm signal limits set by LOFAR at $z\approx9.1$ are excluded at $\gtrsim2σ$ by other probes. Finally, we place limits on the IGM spin temperature from LOFAR, disfavouring at 95 per cent confidence spin temperatures below $\sim2.6$ K across an IGM neutral fraction range of $0.15 \lesssim \bar{x}_{H{\scriptscriptstyle I}} \lesssim 0.6$. Note, these limits are only obtained from 141 hrs of data in a single redshift bin. With tighter upper limits, across multiple redshift bins expected in the near future from LOFAR, more viable models will be ruled out. Our approach demonstrates the potential of forward modelling tools such as 21CMMC in combining 21-cm observations with other high-$z$ probes to constrain the astrophysics of galaxies.

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Measuring HERA's primary beam in-situ: methodology and first results

The central challenge in 21~cm cosmology is isolating the cosmological signal from bright foregrounds. Many separation techniques rely on the accurate knowledge of the sky and the instrumental response, including the antenna primary beam. For drift-scan telescopes such as the Hydrogen Epoch of Reionization Array \citep[HERA, ][]{DeBoer2017} that do not move, primary beam characterization is particularly challenging because standard beam-calibration routines do not apply \citep{Cornwell2005} and current techniques require accurate source catalogs at the telescope resolution. We present an extension of the method from \citet{Pober2012} where they use beam symmetries to create a network of overlapping source tracks that break the degeneracy between source flux density and beam response and allow their simultaneous estimation. We fit the beam response of our instrument using early HERA observations and find that our results agree well with electromagnetic simulations down to a -20~dB level in power relative to peak gain for sources with high signal-to-noise ratio. In addition, we construct a source catalog with 90 sources down to a flux density of 1.4~Jy at 151~MHz.

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A tale of two sites -- I: Inferring the properties of minihalo-hosted galaxies from current observations

The very first galaxies that started the cosmic dawn likely resided in so-called "minihaloes", with masses of $\sim10^5$-$10^8\mathrm{M}_\odot$, accreting their gas from the intergalactic medium through H$_2$ cooling. Such molecularly cooled galaxies (MCGs) mostly formed in pristine environments, hosted massive, metal-free stars, and were eventually sterilized by the build-up of a disassociating (Lyman-Werner; LW) background. Therefore, their properties might be very different from the galaxies we see in the later Universe. Although MCGs are probably too faint to be observed directly, we could nevertheless infer their properties from the imprint they leave in the cosmic 21-cm signal. Here we quantify this imprint by extending the public simulation code 21cmFAST to allow for a distinct population of MCGs. We allow MCGs to have different properties from other galaxies, including unique scaling relations for their stellar-to-halo mass ratios, ionizing escape fractions, and spectral energy distributions. We track inhomogeneous recombinations, disassociative LW feedback, and photoheating from reionization. After demonstrating how MCGs can shape the 21-cm signal, we explore to what extent current observations can already place constraints on their properties. The cosmic microwave background optical depth from Planck sets an upper limit on the product of the ionizing escape fraction and the stellar mass in MCGs. When including also the timing of the putative EDGES absorption signal, we find an additional strong degeneracy between the stellar mass and the X-ray luminosity of MCGs. If proven to be of cosmic origin, the timing of the EDGES signal would have been set by MCGs.

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Foreground modelling via Gaussian process regression: an application to HERA data

The key challenge in the observation of the redshifted 21-cm signal from cosmic reionization is its separation from the much brighter foreground emission. Such separation relies on the different spectral properties of the two components, although, in real life, the foreground intrinsic spectrum is often corrupted by the instrumental response, inducing systematic effects that can further jeopardize the measurement of the 21-cm signal. In this paper, we use Gaussian Process Regression to model both foreground emission and instrumental systematics in $\sim 2$ hours of data from the Hydrogen Epoch of Reionization Array. We find that a simple co-variance model with three components matches the data well, giving a residual power spectrum with white noise properties. These consist of an "intrinsic" and instrumentally corrupted component with a coherence-scale of 20 MHz and 2.4 MHz respectively (dominating the line of sight power spectrum over scales $k_{\parallel} \le 0.2$ h cMpc$^{-1}$) and a baseline dependent periodic signal with a period of $\sim 1$ MHz (dominating over $k_{\parallel} \sim 0.4 - 0.8$h cMpc$^{-1}$) which should be distinguishable from the 21-cm EoR signal whose typical coherence-scales is $\sim 0.8$ MHz.

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The Impact of Realistic Foreground and Instrument Models on 21cm Epoch of Reionization Experiments

Predictions for the ability of 21-cm interferometric experiments to discriminate Epoch of Reionization (EoR) signal models are typically limited by the simplicity of data models, whereby foreground signals and characteristics of the instrument are often simplified or neglected.To move towards more realistic scenarios, we explore the effects of applying more realistic foreground and instrument models to the 21cm signal, and the ability to estimate astrophysical parameters with these additional complexities. We use a highly-optimized version of \textsc{21cmFAST}, integrated into \textsc{21cmMC}, to generate lightcones of the brightness temperature fluctuation for Bayesian parameter estimation. We include a statistical point-source foreground model and an instrument model based on the Murchison Widefield Array (MWA) scaled in observation time to have an effective sensitivity similar to the future Square Kilometre Array (SKA). We also extend the current likelihood prescription to account for the presence of beam convolution and foregrounds, the 2-Dimensional Power Spectrum (PS), and the correlation of PS modes. We use frequency bands between 150 and 180 MHz to constrain the ionizing efficiency ($ζ$), the minimum virial temperature of halos ($T_{\mathrm{vir}}$), the soft X-ray emissivity per unit Star Formation Rate (SFR) ($L_X/SFR$ ), and the X-ray energy threshold ($E_0$). We find that the inclusion of realistic foregrounds and instrumental components biases the parameter constraints due to unaccounted for cross-power between the EoR signal, foregrounds and thermal noise. This causes estimates of $ζ$ to be biased by up to $5σ$ but the estimates of $T_{vir}$, L$_X$/SFR and E$_0$ remain unaffected and are all within $1σ$.

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Absolute Calibration Strategies for the Hydrogen Epoch of Reionization Array and Their Impact on the 21 cm Power Spectrum

We discuss absolute calibration strategies for Phase I of the Hydrogen Epoch of Reionization Array (HERA), which aims to measure the cosmological 21 cm signal from the Epoch of Reionization (EoR). HERA is a drift-scan array with a 10 degree wide field of view, meaning bright, well-characterized point source transits are scarce. This, combined with HERA's redundant sampling of the uv plane and the modest angular resolution of the Phase I instrument, make traditional sky-based and self-calibration techniques difficult to implement with high dynamic range. Nonetheless, in this work we demonstrate calibration for HERA using point source catalogues and electromagnetic simulations of its primary beam. We show that unmodeled diffuse flux and instrumental contaminants can corrupt the gain solutions, and present a gain smoothing approach for mitigating their impact on the 21 cm power spectrum. We also demonstrate a hybrid sky and redundant calibration scheme and compare it to pure sky-based calibration, showing only a marginal improvement to the gain solutions at intermediate delay scales. Our work suggests that the HERA Phase I system can be well-calibrated for a foreground-avoidance power spectrum estimator by applying direction-independent gains with a small set of degrees of freedom across the frequency and time axes.

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Mitigating Internal Instrument Coupling II: A Method Demonstration with the Hydrogen Epoch of Reionization Array

We present a study of internal reflection and cross coupling systematics in Phase I of the Hydrogen Epoch of Reionization Array (HERA). In a companion paper, we outlined the mathematical formalism for such systematics and presented algorithms for modeling and removing them from the data. In this work, we apply these techniques to data from HERA's first observing season as a method demonstration. The data show evidence for systematics that, without removal, would hinder a detection of the 21 cm power spectrum for the targeted EoR line-of-sight modes in the range 0.2 < k_parallel < 0.5\ h^-1 Mpc. After systematic removal, we find we can recover these modes in the power spectrum down to the integrated noise-floor of a nightly observation, achieving a dynamic range in the EoR window of 10^-6 in power (mK^2 units) with respect to the bright galactic foreground signal. In the absence of other systematics and assuming the systematic suppression demonstrated here continues to lower noise levels, our results suggest that fully-integrated HERA Phase I may have the capacity to set competitive upper limits on the 21 cm power spectrum. For future observing seasons, HERA will have upgraded analog and digital hardware to better control these systematics in the field.

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