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Brendt Wohlberg

Publications and source records attributed to Brendt Wohlberg.

At least 19 recordsLinked to original sources

Stochastic Generative Plug-and-Play Priors

Plug-and-play (PnP) methods are widely used for solving imaging inverse problems by incorporating a denoiser into optimization algorithms. Score-based diffusion models (SBDMs) have recently demonstrated strong generative performance through a denoiser trained across a wide range of noise levels. Despite their shared reliance on denoisers, it remains unclear how to systematically use SBDMs as priors within the PnP framework without relying on reverse diffusion sampling. In this paper, we establish a score-based interpretation of PnP that justifies using pretrained SBDMs directly within PnP algorithms. Building on this connection, we introduce a stochastic generative PnP (SGPnP) framework that injects noise to better leverage the expressive generative SBDM priors, thereby improving robustness in severely ill-posed inverse problems. We provide a new theory showing that this noise injection induces optimization on a Gaussian-smoothed objective and promotes escape from strict saddle points. Experiments on challenging inverse tasks, such as multi-coil MRI reconstruction and large-mask natural image inpainting, demonstrate consistent improvement over conventional PnP methods and achieve performance competitive with diffusion-based solvers.

cs.CV

Material Identification using Multi-Modal Intrinsic Radiation and Radiography

We investigate multi-modal material identification for special nuclear material (SNM) configurations using a combination of X-ray radiography, high-resolution {\gamma}-ray spectroscopy, and neutron multiplicity measurements. We consider a Beryllium Reflected Plutonium sphere (BeRP) ball surrounded by one or two concentric shielding shells of unknown composition whose radii are assumed known from radiography. High-purity germanium (HPGe) spectra are reduced to net counts in selected Pu-239 photo-peaks, while neutron multiplicity information is summarized by Feynman variances Y2 and Y3 computed from factorial moments of the neutron counting statistics. Using synthetic data generated with the Gamma Detector Response and Analysis Software (GADRAS) for a range of shielding materials and thicknesses, we cast the material identification problem as a supervised multi-class classification task over all admissible shell-material combinations. We demonstrate that a random forest classifier trained on combined gamma and neutron features achieves almost perfect identification accuracy for single-shell cases, and substantial performance gains for more challenging double-shell configurations relative to gamma-only classification. Alternative statistical and machine-learning formulations for this multi-class problem are examined along with examination of the impact of model-mismatch between the forward model and the test cases as given by variations in the statistical noise. Opportunities for extending the approach to more complex geometries and experimental data are also discussed.

physics.ins-det

Deep Parameter Interpolation for Scalar Conditioning

We propose deep parameter interpolation (DPI), a general-purpose method for transforming an existing deep neural network architecture into one that accepts an additional scalar input. Recent deep generative models, including diffusion models and flow matching, employ a single neural network to learn a time- or noise level-dependent vector field. Designing a network architecture to accurately represent this vector field is challenging because the network must integrate information from two different sources: a high-dimensional vector (usually an image) and a scalar. Common approaches either encode the scalar as an additional image input or combine scalar and vector information in specific network components, which restricts architecture choices. Instead, we propose to maintain two learnable parameter sets within a single network and to introduce the scalar dependency by dynamically interpolating between the parameter sets based on the scalar value during training and sampling. DPI is a simple, architecture-agnostic method for adding scalar dependence to a neural network. We demonstrate that our method improves denoising performance and enhances sample quality for both diffusion and flow matching models, while achieving computational efficiency comparable to standard scalar conditioning techniques. Code is available at https://github.com/wustl-cig/parameter_interpolation.

eess.IV

Analysis Plug-and-Play Methods for Imaging Inverse Problems

Plug-and-Play Priors (PnP) is a popular framework for solving imaging inverse problems by integrating learned priors in the form of denoisers trained to remove Gaussian noise from images. In standard PnP methods, the denoiser is applied directly in the image domain, serving as an implicit prior on natural images. This paper considers an alternative analysis formulation of PnP, in which the prior is imposed on a transformed representation of the image, such as its gradient. Specifically, we train a Gaussian denoiser to operate in the gradient domain, rather than on the image itself. Conceptually, this is an extension of total variation (TV) regularization to learned TV regularization. To incorporate this gradient-domain prior in image reconstruction algorithms, we develop two analysis PnP algorithms based on half-quadratic splitting (APnP-HQS) and the alternating direction method of multipliers (APnP-ADMM). We evaluate our approach on image deblurring and super-resolution, demonstrating that the analysis formulation achieves performance comparable to image-domain PnP algorithms.

eess.IV

An Adaptive Multiparameter Penalty Selection Method for Multiconstraint and Multiblock ADMM

This work presents a new method for online selection of multiple penalty parameters for the alternating direction method of multipliers (ADMM) algorithm applied to optimization problems with multiple constraints or functionals with block matrix components. ADMM is widely used for solving constrained optimization problems in a variety of fields, including signal and image processing. Implementations of ADMM often utilize a single hyperparameter, referred to as the penalty parameter, which needs to be tuned to control the rate of convergence. However, in problems with multiple constraints, ADMM may demonstrate slow convergence regardless of penalty parameter selection due to scale differences between constraints. Accounting for scale differences between constraints to improve convergence in these cases requires introducing a penalty parameter for each constraint. The proposed method is able to adaptively account for differences in scale between constraints, providing robustness with respect to problem transformations and initial selection of penalty parameters. It is also simple to understand and implement. Our numerical experiments demonstrate that the proposed method performs favorably compared to a variety of existing penalty parameter selection methods.

eess.IV

Learned Correction Methods for Ultrasound Computed Tomography Imaging Using Simplified Physics Models

Ultrasound computed tomography (USCT) is an emerging modality for breast imaging. Image reconstruction methods that incorporate accurate wave physics produce high resolution quantitative images of acoustic properties but are computationally expensive. The use of a simplified linear model in reconstruction reduces computational expense at the cost of reduced accuracy. This work aims to systematically compare different learning approaches for USCT reconstruction utilizing simplified linear models. This work considered various learning approaches to compensate for errors stemming from a linearized wave propagation model: correction in the data and image domains. The resulting image reconstruction methods are systematically assessed, alongside data-driven and model-based methods, in four virtual imaging studies utilizing anatomically realistic numerical phantoms. Image quality was assessed utilizing relative root mean square error (RRMSE), structural similarity index measure (SSIM), and a task-based assessment for tumor detection. Correction in the measurement domain resulted in images with minor visual artifacts and highly accurate task performance. Correction in the image domain demonstrated a heavy bias on training data, resulting in hallucinations, but greater robustness to measurement noise. Combining both forms of correction performed best in terms of RRMSE and SSIM, at the cost of task performance. This work systematically assessed learned reconstruction methods incorporating an approximated physical model for USCT imaging. Results demonstrated the importance of incorporating physics, compared to data-driven methods. Learning a correction in the data domain led to better task performance and robust out-of-distribution generalization compared to correction in the image domain.

eess.IV

Ptychography using Blind Multi-Mode PMACE

Ptychography is an imaging technique that enables nanometer-scale reconstruction of complex transmittance images by scanning objects with overlapping illumination patterns. However, the illumination function is typically unknown, which presents challenges for reconstruction, especially when using partially coherent light sources. In this paper, we introduce Blind Multi-Mode Projected Multi-Agent Consensus Equilibrium (BM-PMACE) for blind ptychographic reconstruction. We extend the PMACE framework for distributed inverse problems to jointly estimate the complex transmittance image and multiple, unknown, partially coherent probe functions. Importantly, our method maintains local probe estimates to exploit complementary information at multiple probe locations. Our method also incorporates a dynamic strategy for integrating additional probe modes. Through experimental simulations and validations using both synthetic and measured data, we demonstrate that BM-PMACE outperforms existing approaches in reconstruction quality and convergence rate.

eess.IV

Plug-and-Play Priors as a Score-Based Method

Plug-and-play (PnP) methods are extensively used for solving imaging inverse problems by integrating physical measurement models with pre-trained deep denoisers as priors. Score-based diffusion models (SBMs) have recently emerged as a powerful framework for image generation by training deep denoisers to represent the score of the image prior. While both PnP and SBMs use deep denoisers, the score-based nature of PnP is unexplored in the literature due to its distinct origins rooted in proximal optimization. This letter introduces a novel view of PnP as a score-based method, a perspective that enables the re-use of powerful SBMs within classical PnP algorithms without retraining. We present a set of mathematical relationships for adapting popular SBMs as priors within PnP. We show that this approach enables a direct comparison between PnP and SBM-based reconstruction methods using the same neural network as the prior. Code is available at https://github.com/wustl-cig/score_pnp.

eess.IV

Closed-Form Approximation of the Total Variation Proximal Operator

Total variation (TV) is a widely used function for regularizing imaging inverse problems that is particularly appropriate for images whose underlying structure is piecewise constant. TV regularized optimization problems are typically solved using proximal methods, but the way in which they are applied is constrained by the absence of a closed-form expression for the proximal operator of the TV function. A closed-form approximation of the TV proximal operator has previously been proposed, but its accuracy was not theoretically explored in detail. We address this gap by making several new theoretical contributions, proving that the approximation leads to a proximal operator of some convex function, it is equivalent to a gradient descent step on a smoothed version of TV, and that its error can be fully characterized and controlled with its scaling parameter. We experimentally validate our theoretical results on image denoising and sparse-view computed tomography (CT) image reconstruction.

eess.IV

Random Walks with Tweedie: A Unified View of Score-Based Diffusion Models

We present a concise derivation for several influential score-based diffusion models that relies on only a few textbook results. Diffusion models have recently emerged as powerful tools for generating realistic, synthetic signals -- particularly natural images -- and often play a role in state-of-the-art algorithms for inverse problems in image processing. While these algorithms are often surprisingly simple, the theory behind them is not, and multiple complex theoretical justifications exist in the literature. Here, we provide a simple and largely self-contained theoretical justification for score-based diffusion models that is targeted towards the signal processing community. This approach leads to generic algorithmic templates for training and generating samples with diffusion models. We show that several influential diffusion models correspond to particular choices within these templates and demonstrate that alternative, more straightforward algorithmic choices can provide comparable results. This approach has the added benefit of enabling conditional sampling without any likelihood approximation.

cs.CV

Survey of Deep Learning and Physics-Based Approaches in Computational Wave Imaging

Computational wave imaging (CWI) extracts hidden structure and physical properties of a volume of material by analyzing wave signals that traverse that volume. Applications include seismic exploration of the Earth's subsurface, acoustic imaging and non-destructive testing in material science, and ultrasound computed tomography in medicine. Current approaches for solving CWI problems can be divided into two categories: those rooted in traditional physics, and those based on deep learning. Physics-based methods stand out for their ability to provide high-resolution and quantitatively accurate estimates of acoustic properties within the medium. However, they can be computationally intensive and are susceptible to ill-posedness and nonconvexity typical of CWI problems. Machine learning-based computational methods have recently emerged, offering a different perspective to address these challenges. Diverse scientific communities have independently pursued the integration of deep learning in CWI. This review discusses how contemporary scientific machine-learning (ML) techniques, and deep neural networks in particular, have been developed to enhance and integrate with traditional physics-based methods for solving CWI problems. We present a structured framework that consolidates existing research spanning multiple domains, including computational imaging, wave physics, and data science. This study concludes with important lessons learned from existing ML-based methods and identifies technical hurdles and emerging trends through a systematic analysis of the extensive literature on this topic.

cs.LG

Total Variation Regularization for Tomographic Reconstruction of Cylindrically Symmetric Objects

Flash X-ray computed tomography (CT) is an important imaging modality for characterization of high-speed dynamic events, such as Kolsky bar impact experiments for the study of mechanical properties of materials subjected to impulsive forces. Due to experimental constraints, the number of X-ray views that can be obtained is typically very sparse in both space and time, requiring strong priors in order to enable a CT reconstruction. In this paper, we propose an effective method for exploiting the cylindrical symmetry inherent in the experiment via a variant of total variation (TV) regularization that operates in cylindrical coordinates, and demonstrate that it outperforms competing approaches.

eess.IV

Multiscale Data-driven Seismic Full-waveform Inversion with Field Data Study

Seismic full-waveform inversion (FWI), which uses iterative methods to estimate high-resolution subsurface models from seismograms, is a powerful imaging technique in exploration geophysics. In recent years, the computational cost of FWI has grown exponentially due to the increasing size and resolution of seismic data. Moreover, it is a non-convex problem and can encounter local minima due to the limited accuracy of the initial velocity models or the absence of low frequencies in the measurements. To overcome these computational issues, we develop a multiscale data-driven FWI method based on fully convolutional networks (FCN). In preparing the training data, we first develop a real-time style transform method to create a large set of synthetic subsurface velocity models from natural images. We then develop two convolutional neural networks with encoder-decoder structure to reconstruct the low- and high-frequency components of the subsurface velocity models, separately. To validate the performance of our data-driven inversion method and the effectiveness of the synthesized training set, we compare it with conventional physics-based waveform inversion approaches using both synthetic and field data. These numerical results demonstrate that, once our model is fully trained, it can significantly reduce the computation time, and yield more accurate subsurface velocity models in comparison with conventional FWI.

physics.geo-ph

PtychoDV: Vision Transformer-Based Deep Unrolling Network for Ptychographic Image Reconstruction

Ptychography is an imaging technique that captures multiple overlapping snapshots of a sample, illuminated coherently by a moving localized probe. The image recovery from ptychographic data is generally achieved via an iterative algorithm that solves a nonlinear phase retrieval problem derived from measured diffraction patterns. However, these iterative approaches have high computational cost. In this paper, we introduce PtychoDV, a novel deep model-based network designed for efficient, high-quality ptychographic image reconstruction. PtychoDV comprises a vision transformer that generates an initial image from the set of raw measurements, taking into consideration their mutual correlations. This is followed by a deep unrolling network that refines the initial image using learnable convolutional priors and the ptychography measurement model. Experimental results on simulated data demonstrate that PtychoDV is capable of outperforming existing deep learning methods for this problem, and significantly reduces computational cost compared to iterative methodologies, while maintaining competitive performance.

eess.IV

Projected Multi-Agent Consensus Equilibrium (PMACE) with Application to Ptychography

Multi-Agent Consensus Equilibrium (MACE) formulates an inverse imaging problem as a balance among multiple update agents such as data-fitting terms and denoisers. However, each such agent operates on a separate copy of the full image, leading to redundant memory use and slow convergence when each agent affects only a small subset of the full image. In this paper, we extend MACE to Projected Multi-Agent Consensus Equilibrium (PMACE), in which each agent updates only a projected component of the full image, thus greatly reducing memory use for some applications.We describe PMACE in terms of an equilibrium problem and an equivalent fixed point problem and show that in most cases the PMACE equilibrium is not the solution of an optimization problem. To demonstrate the value of PMACE, we apply it to the problem of ptychography, in which a sample is reconstructed from the diffraction patterns resulting from coherent X-ray illumination at multiple overlapping spots. In our PMACE formulation, each spot corresponds to a separate data-fitting agent, with the final solution found as an equilibrium among all the agents. Our results demonstrate that the PMACE reconstruction algorithm generates more accurate reconstructions at a lower computational cost than existing ptychography algorithms when the spots are sparsely sampled.

math.OC

TRINIDI: Time-of-Flight Resonance Imaging with Neutrons for Isotopic Density Inference

Accurate reconstruction of 2D and 3D isotope densities is a desired capability with great potential impact in applications such as evaluation and development of next-generation nuclear fuels. Neutron time-of-flight (TOF) resonance imaging offers a potential approach by exploiting the characteristic neutron absorption spectra of each isotope. However, it is a major challenge to compute quantitatively accurate images due to a variety of confounding effects such as severe Poisson noise, background scatter, beam non-uniformity, absorption non-linearity, and extended source pulse duration. We present the TRINIDI algorithm which is based on a two-step process in which we first estimate the neutron flux and background counts, and then reconstruct the areal densities of each isotope and pixel. Both components are based on the inversion of a forward model that accounts for the highly non-linear absorption, energy-dependent emission profile, and Poisson noise, while also modeling the substantial spatio-temporal variation of the background and flux. To do this, we formulate the non-linear inverse problem as two optimization problems that are solved in sequence. We demonstrate on both synthetic and measured data that TRINIDI can reconstruct quantitatively accurate 2D views of isotopic areal density that can then be reconstructed into quantitatively accurate 3D volumes of isotopic volumetric density.

eess.IV

Learned Full Waveform Inversion Incorporating Task Information for Ultrasound Computed Tomography

Ultrasound computed tomography (USCT) is an emerging imaging modality that holds great promise for breast imaging. Full-waveform inversion (FWI)-based image reconstruction methods incorporate accurate wave physics to produce high spatial resolution quantitative images of speed of sound or other acoustic properties of the breast tissues from USCT measurement data. However, the high computational cost of FWI reconstruction represents a significant burden for its widespread application in a clinical setting. The research reported here investigates the use of a convolutional neural network (CNN) to learn a mapping from USCT waveform data to speed of sound estimates. The CNN was trained using a supervised approach with a task-informed loss function aiming at preserving features of the image that are relevant to the detection of lesions. A large set of anatomically and physiologically realistic numerical breast phantoms (NBPs) and corresponding simulated USCT measurements was employed during training. Once trained, the CNN can perform real-time FWI image reconstruction from USCT waveform data. The performance of the proposed method was assessed and compared against FWI using a hold-out sample of 41 NBPs and corresponding USCT data. Accuracy was measured using relative mean square error (RMSE), structural self-similarity index measure (SSIM), and lesion detection performance (DICE score). This numerical experiment demonstrates that a supervised learning model can achieve accuracy comparable to FWI in terms of RMSE and SSIM, and better performance in terms of task performance, while significantly reducing computational time.

eess.IV

Deep Equilibrium Learning of Explicit Regularizers for Imaging Inverse Problems

There has been significant recent interest in the use of deep learning for regularizing imaging inverse problems. Most work in the area has focused on regularization imposed implicitly by convolutional neural networks (CNNs) pre-trained for image reconstruction. In this work, we follow an alternative line of work based on learning explicit regularization functionals that promote preferred solutions. We develop the Explicit Learned Deep Equilibrium Regularizer (ELDER) method for learning explicit regularizers that minimize a mean-squared error (MSE) metric. ELDER is based on a regularization functional parameterized by a CNN and a deep equilibrium learning (DEQ) method for training the functional to be MSE-optimal at the fixed points of the reconstruction algorithm. The explicit regularizer enables ELDER to directly inherit fundamental convergence results from optimization theory. On the other hand, DEQ training enables ELDER to improve over existing explicit regularizers without prohibitive memory complexity during training. We use ELDER to train several approaches to parameterizing explicit regularizers and test their performance on three distinct imaging inverse problems. Our results show that ELDER can greatly improve the quality of explicit regularizers compared to existing methods, and show that learning explicit regularizers does not compromise performance relative to methods based on implicit regularization.

eess.IV