arXiv subjects

Brian Mac Namee

Publications and source records attributed to Brian Mac Namee.

At least 19 recordsLinked to original sources

arXiv2026

A Representation-Level Assessment of Bias Mitigation in Foundation Models

We investigate how successful bias mitigation reshapes the embedding space of encoder-only and decoder-only foundation models, offering an internal audit of model behaviour through representational analysis. Using BERT and Llama2 as representative architectures, we assess the shifts in associations between gender and occupation terms by comparing baseline and bias-mitigated variants of the models. Our findings show that bias mitigation reduces gender-occupation disparities in the embedding space, leading to more neutral and balanced internal representations. These representational shifts are consistent across both model types, suggesting that fairness improvements can manifest as interpretable and geometric transformations. These results position embedding analysis as a valuable tool for understanding and validating the effectiveness of debiasing methods in foundation models. To further promote the assessment of decoder-only models, we introduce WinoDec, a dataset consisting of 4,000 sequences with gender and occupation terms, and release it to the general public. (https://github.com/winodec/wino-dec)

cs.CL↗

arXiv2024

PaDeLLM-NER: Parallel Decoding in Large Language Models for Named Entity Recognition

In this study, we aim to reduce generation latency for Named Entity Recognition (NER) with Large Language Models (LLMs). The main cause of high latency in LLMs is the sequential decoding process, which autoregressively generates all labels and mentions for NER, significantly increase the sequence length. To this end, we introduce Parallel Decoding in LLM for NE} (PaDeLLM-NER), a approach that integrates seamlessly into existing generative model frameworks without necessitating additional modules or architectural modifications. PaDeLLM-NER allows for the simultaneous decoding of all mentions, thereby reducing generation latency. Experiments reveal that PaDeLLM-NER significantly increases inference speed that is 1.76 to 10.22 times faster than the autoregressive approach for both English and Chinese. Simultaneously it maintains the quality of predictions as evidenced by the performance that is on par with the state-of-the-art across various datasets.

cs.CL↗

arXiv2023

Explaining Knock-on Effects of Bias Mitigation

In machine learning systems, bias mitigation approaches aim to make outcomes fairer across privileged and unprivileged groups. Bias mitigation methods work in different ways and have known "waterfall" effects, e.g., mitigating bias at one place may manifest bias elsewhere. In this paper, we aim to characterise impacted cohorts when mitigation interventions are applied. To do so, we treat intervention effects as a classification task and learn an explainable meta-classifier to identify cohorts that have altered outcomes. We examine a range of bias mitigation strategies that work at various stages of the model life cycle. We empirically demonstrate that our meta-classifier is able to uncover impacted cohorts. Further, we show that all tested mitigation strategies negatively impact a non-trivial fraction of cases, i.e., people who receive unfavourable outcomes solely on account of mitigation efforts. This is despite improvement in fairness metrics. We use these results as a basis to argue for more careful audits of static mitigation interventions that go beyond aggregate metrics.

cs.LG↗

arXiv2023

ML-KFHE: Multi-label ensemble classification algorithm exploiting sensor fusion properties of the Kalman filter

Despite the success of ensemble classification methods in multi-class classification problems, ensemble methods based on approaches other than bagging have not been widely explored for multi-label classification problems. The Kalman Filter-based Heuristic Ensemble (KFHE) is an ensemble method that exploits the sensor fusion properties of the Kalman filter to combine several classifier models, and that has been shown to be very effective. This work proposes a multi-label version of KFHE, ML-KFHE, demonstrating the effectiveness of the KFHE method on multi-label datasets. Two variants are introduced based on the underlying component classifier algorithm, ML-KFHE-HOMER, and ML-KFHE-CC which uses HOMER and Classifier Chain (CC) as the underlying multi-label algorithms respectively. ML-KFHE-HOMER and ML-KFHE-CC sequentially train multiple HOMER and CC multi-label classifiers and aggregate their outputs using the sensor fusion properties of the Kalman filter. Extensive experiments and detailed analysis were performed on thirteen multi-label datasets and eight other algorithms, which included state-of-the-art ensemble methods. The results show, for both versions, the ML-KFHE framework improves the predictive performance significantly with respect to bagged combinations of HOMER (named E-HOMER), also introduced in this paper, and bagged combination of CC, Ensemble Classifier Chains (ECC), thus demonstrating the effectiveness of ML-KFHE. Also, the ML-KFHE-HOMER variant was found to perform consistently and significantly better than the compared multi-label methods including existing approaches based on ensembles.

cs.LG↗

arXiv2023

Interpretable Weighted Siamese Network to Predict the Time to Onset of Alzheimer's Disease from MRI Images

Alzheimer's Disease (AD) is a progressive disease preceded by Mild Cognitive Impairment (MCI). Early detection of AD is crucial for making treatment decisions. However, most of the literature on computer-assisted detection of AD focuses on classifying brain images into one of three major categories: healthy, MCI, and AD; or categorizing MCI patients into (1) progressive: those who progress from MCI to AD at a future examination time, and (2) stable: those who stay as MCI and never progress to AD. This misses the opportunity to accurately identify the trajectory of progressive MCI patients. In this paper, we revisit the brain image classification task for AD identification and re-frame it as an ordinal classification task to predict how close a patient is to the severe AD stage. To this end, we select progressive MCI patients from the Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset and construct an ordinal dataset with a prediction target that indicates the time to progression to AD. We train a Siamese network model to predict the time to onset of AD based on MRI brain images. We also propose a Weighted variety of Siamese network and compare its performance to a baseline model. Our evaluations show that incorporating a weighting factor to Siamese networks brings considerable performance gain at predicting how close input brain MRI images are to progressing to AD. Moreover, we complement our results with an interpretation of the learned embedding space of the Siamese networks using a model explainability technique.

eess.IV↗

arXiv2023

Distance-Aware eXplanation Based Learning

eXplanation Based Learning (XBL) is an interactive learning approach that provides a transparent method of training deep learning models by interacting with their explanations. XBL augments loss functions to penalize a model based on deviation of its explanations from user annotation of image features. The literature on XBL mostly depends on the intersection of visual model explanations and image feature annotations. We present a method to add a distance-aware explanation loss to categorical losses that trains a learner to focus on important regions of a training dataset. Distance is an appropriate approach for calculating explanation loss since visual model explanations such as Gradient-weighted Class Activation Mapping (Grad-CAMs) are not strictly bounded as annotations and their intersections may not provide complete information on the deviation of a model's focus from relevant image regions. In addition to assessing our model using existing metrics, we propose an interpretability metric for evaluating visual feature-attribution based model explanations that is more informative of the model's performance than existing metrics. We demonstrate performance of our proposed method on three image classification tasks.

cs.CV↗

arXiv2023

Unlearning Spurious Correlations in Chest X-ray Classification

Medical image classification models are frequently trained using training datasets derived from multiple data sources. While leveraging multiple data sources is crucial for achieving model generalization, it is important to acknowledge that the diverse nature of these sources inherently introduces unintended confounders and other challenges that can impact both model accuracy and transparency. A notable confounding factor in medical image classification, particularly in musculoskeletal image classification, is skeletal maturation-induced bone growth observed during adolescence. We train a deep learning model using a Covid-19 chest X-ray dataset and we showcase how this dataset can lead to spurious correlations due to unintended confounding regions. eXplanation Based Learning (XBL) is a deep learning approach that goes beyond interpretability by utilizing model explanations to interactively unlearn spurious correlations. This is achieved by integrating interactive user feedback, specifically feature annotations. In our study, we employed two non-demanding manual feedback mechanisms to implement an XBL-based approach for effectively eliminating these spurious correlations. Our results underscore the promising potential of XBL in constructing robust models even in the presence of confounding factors.

eess.IV↗

arXiv2023

Learning from Exemplary Explanations

eXplanation Based Learning (XBL) is a form of Interactive Machine Learning (IML) that provides a model refining approach via user feedback collected on model explanations. Although the interactivity of XBL promotes model transparency, XBL requires a huge amount of user interaction and can become expensive as feedback is in the form of detailed annotation rather than simple category labelling which is more common in IML. This expense is exacerbated in high stakes domains such as medical image classification. To reduce the effort and expense of XBL we introduce a new approach that uses two input instances and their corresponding Gradient Weighted Class Activation Mapping (GradCAM) model explanations as exemplary explanations to implement XBL. Using a medical image classification task, we demonstrate that, using minimal human input, our approach produces improved explanations (+0.02, +3%) and achieves reduced classification performance (-0.04, -4%) when compared against a model trained without interactions.

cs.LG↗

arXiv2023

What Makes Pre-trained Language Models Better Zero-shot Learners?

Current methods for prompt learning in zeroshot scenarios widely rely on a development set with sufficient human-annotated data to select the best-performing prompt template a posteriori. This is not ideal because in a realworld zero-shot scenario of practical relevance, no labelled data is available. Thus, we propose a simple yet effective method for screening reasonable prompt templates in zero-shot text classification: Perplexity Selection (Perplection). We hypothesize that language discrepancy can be used to measure the efficacy of prompt templates, and thereby develop a substantiated perplexity-based scheme allowing for forecasting the performance of prompt templates in advance. Experiments show that our method leads to improved prediction performance in a realistic zero-shot setting, eliminating the need for any labelled examples.

cs.CL↗

arXiv2023

PUnifiedNER: A Prompting-based Unified NER System for Diverse Datasets

Much of named entity recognition (NER) research focuses on developing dataset-specific models based on data from the domain of interest, and a limited set of related entity types. This is frustrating as each new dataset requires a new model to be trained and stored. In this work, we present a ``versatile'' model -- the Prompting-based Unified NER system (PUnifiedNER) -- that works with data from different domains and can recognise up to 37 entity types simultaneously, and theoretically it could be as many as possible. By using prompt learning, PUnifiedNER is a novel approach that is able to jointly train across multiple corpora, implementing intelligent on-demand entity recognition. Experimental results show that PUnifiedNER leads to significant prediction benefits compared to dataset-specific models with impressively reduced model deployment costs. Furthermore, the performance of PUnifiedNER can achieve competitive or even better performance than state-of-the-art domain-specific methods for some datasets. We also perform comprehensive pilot and ablation studies to support in-depth analysis of each component in PUnifiedNER.

cs.CL↗

arXiv2022

On the Importance of Regularisation & Auxiliary Information in OOD Detection

Neural networks are often utilised in critical domain applications (e.g. self-driving cars, financial markets, and aerospace engineering), even though they exhibit overconfident predictions for ambiguous inputs. This deficiency demonstrates a fundamental flaw indicating that neural networks often overfit on spurious correlations. To address this problem in this work we present two novel objectives that improve the ability of a network to detect out-of-distribution samples and therefore avoid overconfident predictions for ambiguous inputs. We empirically demonstrate that our methods outperform the baseline and perform better than the majority of existing approaches while still maintaining a competitive performance against the rest. Additionally, we empirically demonstrate the robustness of our approach against common corruptions and demonstrate the importance of regularisation and auxiliary information in out-of-distribution detection.

cs.LG↗

arXiv2022

Identifying Spurious Correlations and Correcting them with an Explanation-based Learning

Identifying spurious correlations learned by a trained model is at the core of refining a trained model and building a trustworthy model. We present a simple method to identify spurious correlations that have been learned by a model trained for image classification problems. We apply image-level perturbations and monitor changes in certainties of predictions made using the trained model. We demonstrate this approach using an image classification dataset that contains images with synthetically generated spurious regions and show that the trained model was overdependent on spurious regions. Moreover, we remove the learned spurious correlations with an explanation based learning approach.

cs.CV↗

arXiv2022

Impact of Feedback Type on Explanatory Interactive Learning

Explanatory Interactive Learning (XIL) collects user feedback on visual model explanations to implement a Human-in-the-Loop (HITL) based interactive learning scenario. Different user feedback types will have different impacts on user experience and the cost associated with collecting feedback since different feedback types involve different levels of image annotation. Although XIL has been used to improve classification performance in multiple domains, the impact of different user feedback types on model performance and explanation accuracy is not well studied. To guide future XIL work we compare the effectiveness of two different user feedback types in image classification tasks: (1) instructing an algorithm to ignore certain spurious image features, and (2) instructing an algorithm to focus on certain valid image features. We use explanations from a Gradient-weighted Class Activation Mapping (GradCAM) based XIL model to support both feedback types. We show that identifying and annotating spurious image features that a model finds salient results in superior classification and explanation accuracy than user feedback that tells a model to focus on valid image features.

cs.AI↗

arXiv2022

Utilizing unsupervised learning to improve sward content prediction and herbage mass estimation

Sward species composition estimation is a tedious one. Herbage must be collected in the field, manually separated into components, dried and weighed to estimate species composition. Deep learning approaches using neural networks have been used in previous work to propose faster and more cost efficient alternatives to this process by estimating the biomass information from a picture of an area of pasture alone. Deep learning approaches have, however, struggled to generalize to distant geographical locations and necessitated further data collection to retrain and perform optimally in different climates. In this work, we enhance the deep learning solution by reducing the need for ground-truthed (GT) images when training the neural network. We demonstrate how unsupervised contrastive learning can be used in the sward composition prediction problem and compare with the state-of-the-art on the publicly available GrassClover dataset collected in Denmark as well as a more recent dataset from Ireland where we tackle herbage mass and height estimation.

cs.CV↗

arXiv2022

Unsupervised domain adaptation and super resolution on drone images for autonomous dry herbage biomass estimation

Herbage mass yield and composition estimation is an important tool for dairy farmers to ensure an adequate supply of high quality herbage for grazing and subsequently milk production. By accurately estimating herbage mass and composition, targeted nitrogen fertiliser application strategies can be deployed to improve localised regions in a herbage field, effectively reducing the negative impacts of over-fertilization on biodiversity and the environment. In this context, deep learning algorithms offer a tempting alternative to the usual means of sward composition estimation, which involves the destructive process of cutting a sample from the herbage field and sorting by hand all plant species in the herbage. The process is labour intensive and time consuming and so not utilised by farmers. Deep learning has been successfully applied in this context on images collected by high-resolution cameras on the ground. Moving the deep learning solution to drone imaging, however, has the potential to further improve the herbage mass yield and composition estimation task by extending the ground-level estimation to the large surfaces occupied by fields/paddocks. Drone images come at the cost of lower resolution views of the fields taken from a high altitude and requires further herbage ground-truth collection from the large surfaces covered by drone images. This paper proposes to transfer knowledge learned on ground-level images to raw drone images in an unsupervised manner. To do so, we use unpaired image style translation to enhance the resolution of drone images by a factor of eight and modify them to appear closer to their ground-level counterparts. We then ... ~\url{www.github.com/PaulAlbert31/Clover_SSL}.

cs.CV↗

arXiv2022

A Rationale-Centric Framework for Human-in-the-loop Machine Learning

We present a novel rationale-centric framework with human-in-the-loop -- Rationales-centric Double-robustness Learning (RDL) -- to boost model out-of-distribution performance in few-shot learning scenarios. By using static semi-factual generation and dynamic human-intervened correction, RDL exploits rationales (i.e. phrases that cause the prediction), human interventions and semi-factual augmentations to decouple spurious associations and bias models towards generally applicable underlying distributions, which enables fast and accurate generalisation. Experimental results show that RDL leads to significant prediction benefits on both in-distribution and out-of-distribution tests compared to many state-of-the-art benchmarks -- especially for few-shot learning scenarios. We also perform extensive ablation studies to support in-depth analyses of each component in our framework.

cs.AI↗

arXiv2021

Semi-supervised dry herbage mass estimation using automatic data and synthetic images

Monitoring species-specific dry herbage biomass is an important aspect of pasture-based milk production systems. Being aware of the herbage biomass in the field enables farmers to manage surpluses and deficits in herbage supply, as well as using targeted nitrogen fertilization when necessary. Deep learning for computer vision is a powerful tool in this context as it can accurately estimate the dry biomass of a herbage parcel using images of the grass canopy taken using a portable device. However, the performance of deep learning comes at the cost of an extensive, and in this case destructive, data gathering process. Since accurate species-specific biomass estimation is labor intensive and destructive for the herbage parcel, we propose in this paper to study low supervision approaches to dry biomass estimation using computer vision. Our contributions include: a synthetic data generation algorithm to generate data for a herbage height aware semantic segmentation task, an automatic process to label data using semantic segmentation maps, and a robust regression network trained to predict dry biomass using approximate biomass labels and a small trusted dataset with gold standard labels. We design our approach on a herbage mass estimation dataset collected in Ireland and also report state-of-the-art results on the publicly released Grass-Clover biomass estimation dataset from Denmark. Our code is available at https://git.io/J0L2a

cs.CV↗

arXiv2021

Integrating Unsupervised Clustering and Label-specific Oversampling to Tackle Imbalanced Multi-label Data

There is often a mixture of very frequent labels and very infrequent labels in multi-label datatsets. This variation in label frequency, a type class imbalance, creates a significant challenge for building efficient multi-label classification algorithms. In this paper, we tackle this problem by proposing a minority class oversampling scheme, UCLSO, which integrates Unsupervised Clustering and Label-Specific data Oversampling. Clustering is performed to find out the key distinct and locally connected regions of a multi-label dataset (irrespective of the label information). Next, for each label, we explore the distributions of minority points in the cluster sets. Only the minority points within a cluster are used to generate the synthetic minority points that are used for oversampling. Even though the cluster set is the same across all labels, the distributions of the synthetic minority points will vary across the labels. The training dataset is augmented with the set of label-specific synthetic minority points, and classifiers are trained to predict the relevance of each label independently. Experiments using 12 multi-label datasets and several multi-label algorithms show that the proposed method performed very well compared to the other competing algorithms.

cs.LG↗