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Brice X. Semmens

Publications and source records attributed to Brice X. Semmens.

2 recordsLinked to original sources

FishSense Lite: A Camera-Based, Single Laser Hardware Framework with Software System for In Situ Fish Length Measurement

Fish stock assessments need fish lengths paired with species from far more places than trained surveyors can reach. Recreational divers already visit many of those places, but measuring a fish underwater has required trained observers or specialist equipment. We present FishSense Lite, which recovers fish length from a single photograph taken with a recreational dive camera, a dive laser pointer, and a 3D-printed mount. The diver aims the laser at a fish and takes a picture; afterward, the dot's position in the image gives the range to the fish, and the range turns the fish's size in the image into a length. A citizen-science program, trained by the system's builders, taught its own divers and collected lengths paired with species for 73 wild fish across seven open-water dives. On seven wild fish also measured by an underwater stereo-imaging system, the two instruments agreed without detectable bias (mean difference +0.8%). On rigid targets of known length, FishSense Lite recovered every target to within 1.3%, and 99% of 1,055 frames fell within a 15% error budget. From the error sources we measure, we derive a field protocol: calibrate against a dive slate on every dive, photograph fish within 15 degrees of perpendicular and beyond 1 m, and take at least ten frames of each.

cs.CV↗

Bayesian Stable Isotope Mixing Models

In this paper we review recent advances in Stable Isotope Mixing Models (SIMMs) and place them into an over-arching Bayesian statistical framework which allows for several useful extensions. SIMMs are used to quantify the proportional contributions of various sources to a mixture. The most widely used application is quantifying the diet of organisms based on the food sources they have been observed to consume. At the centre of the multivariate statistical model we propose is a compositional mixture of the food sources corrected for various metabolic factors. The compositional component of our model is based on the isometric log ratio (ilr) transform of Egozcue (2003). Through this transform we can apply a range of time series and non-parametric smoothing relationships. We illustrate our models with 3 case studies based on real animal dietary behaviour.

stat.AP↗