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Buming Guo

Publications and source records attributed to Buming Guo.

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Social Physics of Bacteria: Avoidance of an Information Black Hole

Social physics explores responses to information exchange in a social network, and can be mapped down to bacterial collective signaling. Here, we explore how social inter-bacterial communication includes coordination of response to communication loss, as opposed to solitary searching for food, with collective response emergence at the population level. We present a 2-dimensional enclosed microfluidic environment that utilizes concentric rings of funnel ratchets, which direct motile E.coli bacteria towards a sole exit hole, an information ``black hole'', passage into the black hole irreversibly sweeps the bacteria away via hydrodynamic flow. We show that the spatiotemporal evolution of entropy production reveals how bacteria avoid crossing the hydrodynamic black hole information horizon.

physics.bio-ph

Play. Pause. Rewind. Measuring local entropy production and extractable work in active matter

Time-reversal symmetry breaking and entropy production are universal features of nonequilibrium phenomena. Despite its importance in the physics of active and living systems, the entropy production of systems with many degrees of freedom has remained of little practical significance because the high-dimensionality of their state space makes it difficult to measure. Here we introduce a local measure of entropy production and a numerical protocol to estimate it. We establish a connection between the entropy production and extractability of work in a given region of the system and show how this quantity depends crucially on the degrees of freedom being tracked. We validate our approach in theory, simulation, and experiments by considering systems of active Brownian particles undergoing motility induced phase separation, as well as active Brownian particles and E. Coli in a rectifying device in which the time-reversal asymmetry of the particle dynamics couples to spatial asymmetry to reveal its effects on a macroscopic scale.

cond-mat.soft