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Carolyn T. Bramante

Publications and source records attributed to Carolyn T. Bramante.

2 recordsLinked to original sources

Model-Assisted Bayesian Estimators of Transparent Population Level Summary Measures for Ordinal Outcomes in Randomized Controlled Trials

In randomized controlled trials, ordinal outcomes typically improve statistical efficiency over binary outcomes. The treatment effect on an ordinal outcome is usually described by the odds ratio from a proportional odds model, but this summary measure lacks transparency with respect to its emphasis on the components of the ordinal outcome when proportional odds is violated. We propose various summary measures for ordinal outcomes that are fully transparent in this regard, including 'weighted geometric mean' odds ratios and relative risks, and 'weighted mean' risk differences. We also develop and evaluate efficient model-assisted Bayesian estimators for these population level summary measures based on non-proportional odds models that facilitate covariate adjustment with marginalization via the Bayesian bootstrap. We propose a weighting scheme that engenders appealing invariance properties, including to whether the ordinal outcome is ordered from best to worst versus worst to best. Using computer simulation, we show that comparative testing based on the proposed population level summary measures performs well relative to the conventional proportional odds approach. We also report an analysis of the COVID-OUT trial, which exhibits evidence of non-proportional odds.

stat.ME↗

A method for comparing multiple imputation techniques: a case study on the U.S. National COVID Cohort Collaborative

Healthcare datasets obtained from Electronic Health Records have proven to be extremely useful to assess associations between patients' predictors and outcomes of interest. However, these datasets often suffer from missing values in a high proportion of cases and the simple removal of these cases may introduce severe bias. For these reasons, several multiple imputation algorithms have been proposed to attempt to recover the missing information. Each algorithm presents strengths and weaknesses, and there is currently no consensus on which multiple imputation algorithms works best in a given scenario. Furthermore, the selection of each algorithm parameters and data-related modelling choices are also both crucial and challenging. In this paper, we propose a novel framework to numerically evaluate strategies for handling missing data in the context of statistical analysis, with a particular focus on multiple imputation techniques. We demonstrate the feasibility of our approach on a large cohort of type-2 diabetes patients provided by the National COVID Cohort Collaborative (N3C) Enclave, where we explored the influence of various patient characteristics on outcomes related to COVID-19. Our analysis included classic multiple imputation techniques as well as simple complete-case Inverse Probability Weighted models. The experiments presented here show that our approach could effectively highlight the most valid and performant missing-data handling strategy for our case study. Moreover, our methodology allowed us to gain an understanding of the behavior of the different models and of how it changed as we modified their parameters. Our method is general and can be applied to different research fields and on datasets containing heterogeneous types.

cs.AI↗