arXiv subjects

Carsten Eickhoff

Publications and source records attributed to Carsten Eickhoff.

At least 55 records · Page 3Linked to original sources

arXiv2024

Beyond One-Time Validation: A Framework for Adaptive Validation of Prognostic and Diagnostic AI-based Medical Devices

Prognostic and diagnostic AI-based medical devices hold immense promise for advancing healthcare, yet their rapid development has outpaced the establishment of appropriate validation methods. Existing approaches often fall short in addressing the complexity of practically deploying these devices and ensuring their effective, continued operation in real-world settings. Building on recent discussions around the validation of AI models in medicine and drawing from validation practices in other fields, a framework to address this gap is presented. It offers a structured, robust approach to validation that helps ensure device reliability across differing clinical environments. The primary challenges to device performance upon deployment are discussed while highlighting the impact of changes related to individual healthcare institutions and operational processes. The presented framework emphasizes the importance of repeating validation and fine-tuning during deployment, aiming to mitigate these issues while being adaptable to challenges unforeseen during device development. The framework is also positioned within the current US and EU regulatory landscapes, underscoring its practical viability and relevance considering regulatory requirements. Additionally, a practical example demonstrating potential benefits of the framework is presented. Lastly, guidance on assessing model performance is offered and the importance of involving clinical stakeholders in the validation and fine-tuning process is discussed.

cs.LG↗

arXiv2024

Retrieval Augmented Zero-Shot Text Classification

Zero-shot text learning enables text classifiers to handle unseen classes efficiently, alleviating the need for task-specific training data. A simple approach often relies on comparing embeddings of query (text) to those of potential classes. However, the embeddings of a simple query sometimes lack rich contextual information, which hinders the classification performance. Traditionally, this has been addressed by improving the embedding model with expensive training. We introduce QZero, a novel training-free knowledge augmentation approach that reformulates queries by retrieving supporting categories from Wikipedia to improve zero-shot text classification performance. Our experiments across six diverse datasets demonstrate that QZero enhances performance for state-of-the-art static and contextual embedding models without the need for retraining. Notably, in News and medical topic classification tasks, QZero improves the performance of even the largest OpenAI embedding model by at least 5% and 3%, respectively. Acting as a knowledge amplifier, QZero enables small word embedding models to achieve performance levels comparable to those of larger contextual models, offering the potential for significant computational savings. Additionally, QZero offers meaningful insights that illuminate query context and verify topic relevance, aiding in understanding model predictions. Overall, QZero improves embedding-based zero-shot classifiers while maintaining their simplicity. This makes it particularly valuable for resource-constrained environments and domains with constantly evolving information.

cs.IR↗

arXiv2024

CroCoSum: A Benchmark Dataset for Cross-Lingual Code-Switched Summarization

Cross-lingual summarization (CLS) has attracted increasing interest in recent years due to the availability of large-scale web-mined datasets and the advancements of multilingual language models. However, given the rareness of naturally occurring CLS resources, the majority of datasets are forced to rely on translation which can contain overly literal artifacts. This restricts our ability to observe naturally occurring CLS pairs that capture organic diction, including instances of code-switching. This alteration between languages in mid-message is a common phenomenon in multilingual settings yet has been largely overlooked in cross-lingual contexts due to data scarcity. To address this gap, we introduce CroCoSum, a dataset of cross-lingual code-switched summarization of technology news. It consists of over 24,000 English source articles and 18,000 human-written Chinese news summaries, with more than 92% of the summaries containing code-switched phrases. For reference, we evaluate the performance of existing approaches including pipeline, end-to-end, and zero-shot methods. We show that leveraging existing CLS resources as a pretraining step does not improve performance on CroCoSum, indicating the limited generalizability of current datasets. Finally, we discuss the challenges of evaluating cross-lingual summarizers on code-switched generation through qualitative error analyses.

cs.CL↗

arXiv2024

Circuit Component Reuse Across Tasks in Transformer Language Models

Recent work in mechanistic interpretability has shown that behaviors in language models can be successfully reverse-engineered through circuit analysis. A common criticism, however, is that each circuit is task-specific, and thus such analysis cannot contribute to understanding the models at a higher level. In this work, we present evidence that insights (both low-level findings about specific heads and higher-level findings about general algorithms) can indeed generalize across tasks. Specifically, we study the circuit discovered in Wang et al. (2022) for the Indirect Object Identification (IOI) task and 1.) show that it reproduces on a larger GPT2 model, and 2.) that it is mostly reused to solve a seemingly different task: Colored Objects (Ippolito & Callison-Burch, 2023). We provide evidence that the process underlying both tasks is functionally very similar, and contains about a 78% overlap in in-circuit attention heads. We further present a proof-of-concept intervention experiment, in which we adjust four attention heads in middle layers in order to 'repair' the Colored Objects circuit and make it behave like the IOI circuit. In doing so, we boost accuracy from 49.6% to 93.7% on the Colored Objects task and explain most sources of error. The intervention affects downstream attention heads in specific ways predicted by their interactions in the IOI circuit, indicating that this subcircuit behavior is invariant to the different task inputs. Overall, our results provide evidence that it may yet be possible to explain large language models' behavior in terms of a relatively small number of interpretable task-general algorithmic building blocks and computational components.

cs.CL↗

arXiv2024

Evaluating Search System Explainability with Psychometrics and Crowdsourcing

As information retrieval (IR) systems, such as search engines and conversational agents, become ubiquitous in various domains, the need for transparent and explainable systems grows to ensure accountability, fairness, and unbiased results. Despite recent advances in explainable AI and IR techniques, there is no consensus on the definition of explainability. Existing approaches often treat it as a singular notion, disregarding the multidimensional definition postulated in the literature. In this paper, we use psychometrics and crowdsourcing to identify human-centered factors of explainability in Web search systems and introduce SSE (Search System Explainability), an evaluation metric for explainable IR (XIR) search systems. In a crowdsourced user study, we demonstrate SSE's ability to distinguish between explainable and non-explainable systems, showing that systems with higher scores indeed indicate greater interpretability. We hope that aside from these concrete contributions to XIR, this line of work will serve as a blueprint for similar explainability evaluation efforts in other domains of machine learning and natural language processing.

cs.IR↗

arXiv2024

Stable Anisotropic Regularization

Given the success of Large Language Models (LLMs), there has been considerable interest in studying the properties of model activations. The literature overwhelmingly agrees that LLM representations are dominated by a few "outlier dimensions" with exceedingly high variance and magnitude. Several studies in Natural Language Processing (NLP) have sought to mitigate the impact of such outlier dimensions and force LLMs to be isotropic (i.e., have uniform variance across all dimensions in embedding space). Isotropy is thought to be a desirable property for LLMs that improves model performance and more closely aligns textual representations with human intuition. However, many of the claims regarding isotropy in NLP have been based on the average cosine similarity of embeddings, which has recently been shown to be a flawed measure of isotropy. In this paper, we propose I-STAR: IsoScore*-based STable Anisotropic Regularization, a novel regularization method that can be used to increase or decrease levels of isotropy in embedding space during training. I-STAR uses IsoScore*, the first accurate measure of isotropy that is both differentiable and stable on mini-batch computations. In contrast to several previous works, we find that decreasing isotropy in contextualized embeddings improves performance on the majority of tasks and models considered in this paper.

cs.CL↗

arXiv2024

Language Models Implement Simple Word2Vec-style Vector Arithmetic

A primary criticism towards language models (LMs) is their inscrutability. This paper presents evidence that, despite their size and complexity, LMs sometimes exploit a simple vector arithmetic style mechanism to solve some relational tasks using regularities encoded in the hidden space of the model (e.g., Poland:Warsaw::China:Beijing). We investigate a range of language model sizes (from 124M parameters to 176B parameters) in an in-context learning setting, and find that for a variety of tasks (involving capital cities, uppercasing, and past-tensing) a key part of the mechanism reduces to a simple additive update typically applied by the feedforward (FFN) networks. We further show that this mechanism is specific to tasks that require retrieval from pretraining memory, rather than retrieval from local context. Our results contribute to a growing body of work on the interpretability of LMs, and offer reason to be optimistic that, despite the massive and non-linear nature of the models, the strategies they ultimately use to solve tasks can sometimes reduce to familiar and even intuitive algorithms.

cs.CL↗

arXiv2024

Outlier Dimensions Encode Task-Specific Knowledge

Representations from large language models (LLMs) are known to be dominated by a small subset of dimensions with exceedingly high variance. Previous works have argued that although ablating these outlier dimensions in LLM representations hurts downstream performance, outlier dimensions are detrimental to the representational quality of embeddings. In this study, we investigate how fine-tuning impacts outlier dimensions and show that 1) outlier dimensions that occur in pre-training persist in fine-tuned models and 2) a single outlier dimension can complete downstream tasks with a minimal error rate. Our results suggest that outlier dimensions can encode crucial task-specific knowledge and that the value of a representation in a single outlier dimension drives downstream model decisions.

cs.CL↗

arXiv2023

Controllable Topic-Focused Abstractive Summarization

Controlled abstractive summarization focuses on producing condensed versions of a source article to cover specific aspects by shifting the distribution of generated text towards a desired style, e.g., a set of topics. Subsequently, the resulting summaries may be tailored to user-defined requirements. This paper presents a new Transformer-based architecture capable of producing topic-focused summaries. The architecture modifies the cross-attention mechanism of the Transformer to bring topic-focus control to the generation process while not adding any further parameters to the model. We show that our model sets a new state of the art on the NEWTS dataset in terms of topic-focused abstractive summarization as well as a topic-prevalence score. Moreover, we show via extensive experiments that our proposed topical cross-attention mechanism can be plugged into various Transformer models, such as BART and T5, improving their performance on the CNN/Dailymail and XSum benchmark datasets for abstractive summarization. This is achieved via fine-tuning, without requiring training from scratch. Finally, we show through human evaluation that our model generates more faithful summaries outperforming the state-of-the-art Frost model.

cs.CL↗

arXiv2023

Enhancing the Ranking Context of Dense Retrieval Methods through Reciprocal Nearest Neighbors

Sparse annotation poses persistent challenges to training dense retrieval models; for example, it distorts the training signal when unlabeled relevant documents are used spuriously as negatives in contrastive learning. To alleviate this problem, we introduce evidence-based label smoothing, a novel, computationally efficient method that prevents penalizing the model for assigning high relevance to false negatives. To compute the target relevance distribution over candidate documents within the ranking context of a given query, we assign a non-zero relevance probability to those candidates most similar to the ground truth based on the degree of their similarity to the ground-truth document(s). To estimate relevance we leverage an improved similarity metric based on reciprocal nearest neighbors, which can also be used independently to rerank candidates in post-processing. Through extensive experiments on two large-scale ad hoc text retrieval datasets, we demonstrate that reciprocal nearest neighbors can improve the ranking effectiveness of dense retrieval models, both when used for label smoothing, as well as for reranking. This indicates that by considering relationships between documents and queries beyond simple geometric distance we can effectively enhance the ranking context.

cs.IR↗

arXiv2023

Impact Factors for Computer Science Conferences

An increasing number of CS researchers are employed in academic non-CS departments where publication output is measured in terms of journal impact factors. To foster recognition of publications in peer-reviewed CS conference proceedings, we analyzed more than 40,000 CS publications and computed journal impact factors for 88 top-ranking conferences across a representative range of fields, finding that some conferences have impact factors corresponding to those of high-ranking journals.

cs.DL↗

arXiv2023

Predictive Uncertainty-based Bias Mitigation in Ranking

Societal biases that are contained in retrieved documents have received increased interest. Such biases, which are often prevalent in the training data and learned by the model, can cause societal harms, by misrepresenting certain groups, and by enforcing stereotypes. Mitigating such biases demands algorithms that balance the trade-off between maximized utility for the user with fairness objectives, which incentivize unbiased rankings. Prior work on bias mitigation often assumes that ranking scores, which correspond to the utility that a document holds for a user, can be accurately determined. In reality, there is always a degree of uncertainty in the estimate of expected document utility. This uncertainty can be approximated by viewing ranking models through a Bayesian perspective, where the standard deterministic score becomes a distribution. In this work, we investigate whether uncertainty estimates can be used to decrease the amount of bias in the ranked results, while minimizing loss in measured utility. We introduce a simple method that uses the uncertainty of the ranking scores for an uncertainty-aware, post hoc approach to bias mitigation. We compare our proposed method with existing baselines for bias mitigation with respect to the utility-fairness trade-off, the controllability of methods, and computational costs. We show that an uncertainty-based approach can provide an intuitive and flexible trade-off that outperforms all baselines without additional training requirements, allowing for the post hoc use of this approach on top of arbitrary retrieval models.

cs.IR↗

arXiv2023

Parameter-efficient Modularised Bias Mitigation via AdapterFusion

Large pre-trained language models contain societal biases and carry along these biases to downstream tasks. Current in-processing bias mitigation approaches (like adversarial training) impose debiasing by updating a model's parameters, effectively transferring the model to a new, irreversible debiased state. In this work, we propose a novel approach to develop stand-alone debiasing functionalities separate from the model, which can be integrated into the model on-demand, while keeping the core model untouched. Drawing from the concept of AdapterFusion in multi-task learning, we introduce DAM (Debiasing with Adapter Modules) - a debiasing approach to first encapsulate arbitrary bias mitigation functionalities into separate adapters, and then add them to the model on-demand in order to deliver fairness qualities. We conduct a large set of experiments on three classification tasks with gender, race, and age as protected attributes. Our results show that DAM improves or maintains the effectiveness of bias mitigation, avoids catastrophic forgetting in a multi-attribute scenario, and maintains on-par task performance, while granting parameter-efficiency and easy switching between the original and debiased models.

cs.CL↗

arXiv2023

SSE: A Metric for Evaluating Search System Explainability

Explainable Information Retrieval (XIR) is a growing research area focused on enhancing transparency and trustworthiness of the complex decision-making processes taking place in modern information retrieval systems. While there has been progress in developing XIR systems, empirical evaluation tools to assess the degree of explainability attained by such systems are lacking. To close this gap and gain insights into the true merit of XIR systems, we extend existing insights from a factor analysis of search explainability to introduce SSE (Search System Explainability), an evaluation metric for XIR search systems. Through a crowdsourced user study, we demonstrate SSE's ability to distinguish between explainable and non-explainable systems, showing that systems with higher scores indeed indicate greater interpretability. Additionally, we observe comparable perceived temporal demand and performance levels between non-native and native English speakers. We hope that aside from these concrete contributions to XIR, this line of work will serve as a blueprint for similar explainability evaluation efforts in other domains of machine learning and natural language processing.

cs.IR↗

arXiv2023

Neural Summarization of Electronic Health Records

Hospital discharge documentation is among the most essential, yet time-consuming documents written by medical practitioners. The objective of this study was to automatically generate hospital discharge summaries using neural network summarization models. We studied various data preparation and neural network training techniques that generate discharge summaries. Using nursing notes and discharge summaries from the MIMIC-III dataset, we studied the viability of the automatic generation of various sections of a discharge summary using four state-of-the-art neural network summarization models (BART, T5, Longformer and FLAN-T5). Our experiments indicated that training environments including nursing notes as the source, and discrete sections of the discharge summary as the target output (e.g. "History of Present Illness") improve language model efficiency and text quality. According to our findings, the fine-tuned BART model improved its ROUGE F1 score by 43.6% against its standard off-the-shelf version. We also found that fine-tuning the baseline BART model with other setups caused different degrees of improvement (up to 80% relative improvement). We also observed that a fine-tuned T5 generally achieves higher ROUGE F1 scores than other fine-tuned models and a fine-tuned FLAN-T5 achieves the highest ROUGE score overall, i.e., 45.6. For majority of the fine-tuned language models, summarizing discharge summary report sections separately outperformed the summarization the entire report quantitatively. On the other hand, fine-tuning language models that were previously instruction fine-tuned showed better performance in summarizing entire reports. This study concludes that a focused dataset designed for the automatic generation of discharge summaries by a language model can produce coherent Discharge Summary sections.

cs.CL↗

arXiv2023

Linearly Mapping from Image to Text Space

The extent to which text-only language models (LMs) learn to represent features of the non-linguistic world is an open question. Prior work has shown that pretrained LMs can be taught to caption images when a vision model's parameters are optimized to encode images in the language space. We test a stronger hypothesis: that the conceptual representations learned by frozen text-only models and vision-only models are similar enough that this can be achieved with a linear map. We show that the image representations from vision models can be transferred as continuous prompts to frozen LMs by training only a single linear projection. Using these to prompt the LM achieves competitive performance on captioning and visual question answering tasks compared to models that tune both the image encoder and text decoder (such as the MAGMA model). We compare three image encoders with increasing amounts of linguistic supervision seen during pretraining: BEIT (no linguistic information), NF-ResNET (lexical category information), and CLIP (full natural language descriptions). We find that all three encoders perform equally well at transferring visual property information to the language model (e.g., whether an animal is large or small), but that image encoders pretrained with linguistic supervision more saliently encode category information (e.g., distinguishing hippo vs. elephant) and thus perform significantly better on benchmark language-and-vision tasks. Our results indicate that LMs encode conceptual information structurally similarly to vision-based models, even those that are solely trained on images. Code is available here: https://github.com/jmerullo/limber

cs.CL↗

arXiv2023

Unsupervised Multivariate Time-Series Transformers for Seizure Identification on EEG

Epilepsy is one of the most common neurological disorders, typically observed via seizure episodes. Epileptic seizures are commonly monitored through electroencephalogram (EEG) recordings due to their routine and low expense collection. The stochastic nature of EEG makes seizure identification via manual inspections performed by highly-trained experts a tedious endeavor, motivating the use of automated identification. The literature on automated identification focuses mostly on supervised learning methods requiring expert labels of EEG segments that contain seizures, which are difficult to obtain. Motivated by these observations, we pose seizure identification as an unsupervised anomaly detection problem. To this end, we employ the first unsupervised transformer-based model for seizure identification on raw EEG. We train an autoencoder involving a transformer encoder via an unsupervised loss function, incorporating a novel masking strategy uniquely designed for multivariate time-series data such as EEG. Training employs EEG recordings that do not contain any seizures, while seizures are identified with respect to reconstruction errors at inference time. We evaluate our method on three publicly available benchmark EEG datasets for distinguishing seizure vs. non-seizure windows. Our method leads to significantly better seizure identification performance than supervised learning counterparts, by up to 16% recall, 9% accuracy, and 9% Area under the Receiver Operating Characteristics Curve (AUC), establishing particular benefits on highly imbalanced data. Through accurate seizure identification, our method could facilitate widely accessible and early detection of epilepsy development, without needing expensive label collection or manual feature extraction.

eess.SP↗

arXiv2022

CODER: An efficient framework for improving retrieval through COntextual Document Embedding Reranking

Contrastive learning has been the dominant approach to training dense retrieval models. In this work, we investigate the impact of ranking context - an often overlooked aspect of learning dense retrieval models. In particular, we examine the effect of its constituent parts: jointly scoring a large number of negatives per query, using retrieved (query-specific) instead of random negatives, and a fully list-wise loss. To incorporate these factors into training, we introduce Contextual Document Embedding Reranking (CODER), a highly efficient retrieval framework. When reranking, it incurs only a negligible computational overhead on top of a first-stage method at run time (delay per query in the order of milliseconds), allowing it to be easily combined with any state-of-the-art dual encoder method. After fine-tuning through CODER, which is a lightweight and fast process, models can also be used as stand-alone retrievers. Evaluating CODER in a large set of experiments on the MS~MARCO and TripClick collections, we show that the contextual reranking of precomputed document embeddings leads to a significant improvement in retrieval performance. This improvement becomes even more pronounced when more relevance information per query is available, shown in the TripClick collection, where we establish new state-of-the-art results by a large margin.

cs.IR↗