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Chien-Hsun Chen

Publications and source records attributed to Chien-Hsun Chen.

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Finite-size domains in membranes with active two-state inclusions

The distribution of inclusion-rich domains in membranes with active two-state inclusions is studied by simulations. Our study shows that typical size of inclusion-rich domains ($L$) can be controlled by inclusion activities in several ways. When there is effective attraction between state-1 inclusions, we find: (i) Small domains with only several inclusions are observed for inclusions with time scales ($\sim 10^{-3} {\rm s}$) and interaction energy [$\sim \mathcal{O}({\rm k_BT})$] comparable to motor proteins. (ii) $L$ scales as 1/3 power of the lifetime of state-1 for a wide range of parameters. (iii) $L$ shows a switch-like dependence on state-2 lifetime $k_{12}^{-1}$. That is, $L$ depends weakly on $k_{12}$ when $k_{12} < k_{12}^*$ but increases rapidly with $k_{12}$ when $k_{12} > k_{12}^*$, the crossover $k_{12}^*$ occurs when the diffusion length of a typical state-2 inclusion within its lifetime is comparable to $L$. (iv) Inclusion-curvature coupling provides another length scale that competes with the effects of transition rates.

q-bio.SC

Finite-size Domains in a Membrane with Two-state Active Inclusions

We propose a model that leads to the formation of non-equilibrium finite-size domains in a biological membrane. Our model considers the active conformational change of the inclusions and the coupling between inclusion density and membrane curvature. Two special cases with different interactions are studied by Monte Carlo simulations. In case (i) exited state inclusions prefer to aggregate. In case (ii) ground state inclusions prefer to aggregate. When the inclusion density is not coupled to the local membrane curvature, in case (i) the typical length scale ($\sqrt{M}$) of the inclusion clusters shows weak dependence on the excitation rate ($K_{on}$) of the inclusions for a wide range of $K_{on}$ but increases fast when $K_{on}$ becomes sufficiently large; in case (ii) $\sqrt{M}\sim {K_{on}}^{-{1/3}}$ for a wide range of $K_{on}$. When the inclusion density is coupled to the local membrane curvature, the curvature coupling provides the upper limit of the inclusion clusters. In case (i) (case (ii)), the formation of the inclusions is suppressed when $K_{off}$ ($K_{on}$) is sufficiently large such that the ground state (excited state) inclusions do not have sufficient time to aggregate. We also find that the mobility of an inclusion in the membrane depends on inclusion-curvature coupling. Our study suggests possible mechanisms that produce finite-size domains in biological membranes.

cond-mat.soft