SearcharxivSearch

arXiv subjects

Christopher Fang-Yen

Publications and source records attributed to Christopher Fang-Yen.

2 recordsLinked to original sources

The time is ripe to reverse engineer an entire nervous system: simulating behavior from neural interactions

Just like electrical engineers understand how microprocessors execute programs in terms of how transistor currents are affected by their inputs, neuroscientists want to understand behavior production in terms of how neuronal outputs are affected by their inputs and internal states. This dependency of neuronal outputs on inputs can be described by a state-dependent input-output (IO)-function. However, to reliably identify these IO-functions, we need to perturb each input and combinations of inputs while observing all the outputs. Here, we argue that such completeness is possible in C. elegans; a complete description that goes all the way from the activity of every neuron to predict behavior. The established and growing toolkit of optophysiology can non-invasively capture and control every neuron's activity and scale to countless experiments. The information from many such experiments can be pooled while capturing the inter-individual variability because neuronal identity and function are largely conserved across individuals. Just like electrical engineers use transistor IO-functions to simulate program execution, we argue that neuronal IO-functions could be used to simulate the impressive breadth of brain states and behaviors of C. elegans.

q-bio.NC

Enrichment of deeply penetrating waves in disordered media

Waves incident to a highly scattering medium are incapable of penetrating deep into the medium due to the diffusion process induced by multiple scattering. This poses a fundamental limitation to optically imaging, sensing, and manipulating targets embedded in opaque scattering layers such as biological tissues. One strategy for mitigating the shallow wave penetration is to exploit eigenmodes with anomalously high transmittance existing in any disordered medium. When waves are coupled to these eigenmodes, strong constructive wave interference enhances deeply penetrating waves. However, finding such eigenmodes has been a challenging task due to the complexity of disordered media. In this Letter, we present an iterative wavefront control method that selectively enriches the coupling of incident beam to high-transmission eigenmodes. Specifically, we refined the high-transmission eigenmodes from an arbitrary initial wave by either maximizing transmitted wave intensity or minimizing reflected wave intensity. Using the proposed method, we achieved more than a factor of 3 increases in light transmission through a scattering medium exhibiting hundreds of scattering events. Our approach is readily applicable to in vivo applications in which only the detection of reflected waves is available. Enhancing light penetration will lead to improving the working depth of optical imaging and treatment techniques.

physics.optics