arXiv subjects

Christos Bergeles

Publications and source records attributed to Christos Bergeles.

31 records · Page 2Linked to original sources

arXiv2024

Semi-Autonomous Laparoscopic Robot Docking with Learned Hand-Eye Information Fusion

In this study, we introduce a novel shared-control system for key-hole docking operations, combining a commercial camera with occlusion-robust pose estimation and a hand-eye information fusion technique. This system is used to enhance docking precision and force-compliance safety. To train a hand-eye information fusion network model, we generated a self-supervised dataset using this docking system. After training, our pose estimation method showed improved accuracy compared to traditional methods, including observation-only approaches, hand-eye calibration, and conventional state estimation filters. In real-world phantom experiments, our approach demonstrated its effectiveness with reduced position dispersion (1.23\pm 0.81 mm vs. 2.47 \pm 1.22 mm) and force dispersion (0.78\pm 0.57 N vs. 1.15 \pm 0.97 N) compared to the control group. These advancements in semi-autonomy co-manipulation scenarios enhance interaction and stability. The study presents an anti-interference, steady, and precision solution with potential applications extending beyond laparoscopic surgery to other minimally invasive procedures.

cs.RO↗

arXiv2024

RetiGen: A Framework for Generalized Retinal Diagnosis Using Multi-View Fundus Images

This study introduces a novel framework for enhancing domain generalization in medical imaging, specifically focusing on utilizing unlabelled multi-view colour fundus photographs. Unlike traditional approaches that rely on single-view imaging data and face challenges in generalizing across diverse clinical settings, our method leverages the rich information in the unlabelled multi-view imaging data to improve model robustness and accuracy. By incorporating a class balancing method, a test-time adaptation technique and a multi-view optimization strategy, we address the critical issue of domain shift that often hampers the performance of machine learning models in real-world applications. Experiments comparing various state-of-the-art domain generalization and test-time optimization methodologies show that our approach consistently outperforms when combined with existing baseline and state-of-the-art methods. We also show our online method improves all existing techniques. Our framework demonstrates improvements in domain generalization capabilities and offers a practical solution for real-world deployment by facilitating online adaptation to new, unseen datasets. Our code is available at https://github.com/zgy600/RetiGen .

cs.CV↗

arXiv2024

Excitation Trajectory Optimization for Dynamic Parameter Identification Using Virtual Constraints in Hands-on Robotic System

This paper proposes a novel, more computationally efficient method for optimizing robot excitation trajectories for dynamic parameter identification, emphasizing self-collision avoidance. This addresses the system identification challenges for getting high-quality training data associated with co-manipulated robotic arms that can be equipped with a variety of tools, a common scenario in industrial but also clinical and research contexts. Utilizing the Unified Robotics Description Format (URDF) to implement a symbolic Python implementation of the Recursive Newton-Euler Algorithm (RNEA), the approach aids in dynamically estimating parameters such as inertia using regression analyses on data from real robots. The excitation trajectory was evaluated and achieved on par criteria when compared to state-of-the-art reported results which didn't consider self-collision and tool calibrations. Furthermore, physical Human-Robot Interaction (pHRI) admittance control experiments were conducted in a surgical context to evaluate the derived inverse dynamics model showing a 30.1\% workload reduction by the NASA TLX questionnaire.

cs.RO↗

arXiv2023

Deep Homography Prediction for Endoscopic Camera Motion Imitation Learning

In this work, we investigate laparoscopic camera motion automation through imitation learning from retrospective videos of laparoscopic interventions. A novel method is introduced that learns to augment a surgeon's behavior in image space through object motion invariant image registration via homographies. Contrary to existing approaches, no geometric assumptions are made and no depth information is necessary, enabling immediate translation to a robotic setup. Deviating from the dominant approach in the literature which consist of following a surgical tool, we do not handcraft the objective and no priors are imposed on the surgical scene, allowing the method to discover unbiased policies. In this new research field, significant improvements are demonstrated over two baselines on the Cholec80 and HeiChole datasets, showcasing an improvement of 47% over camera motion continuation. The method is further shown to indeed predict camera motion correctly on the public motion classification labels of the AutoLaparo dataset. All code is made accessible on GitHub.

eess.IV↗

arXiv2023

OpTaS: An Optimization-based Task Specification Library for Trajectory Optimization and Model Predictive Control

This paper presents OpTaS, a task specification Python library for Trajectory Optimization (TO) and Model Predictive Control (MPC) in robotics. Both TO and MPC are increasingly receiving interest in optimal control and in particular handling dynamic environments. While a flurry of software libraries exists to handle such problems, they either provide interfaces that are limited to a specific problem formulation (e.g. TracIK, CHOMP), or are large and statically specify the problem in configuration files (e.g. EXOTica, eTaSL). OpTaS, on the other hand, allows a user to specify custom nonlinear constrained problem formulations in a single Python script allowing the controller parameters to be modified during execution. The library provides interface to several open source and commercial solvers (e.g. IPOPT, SNOPT, KNITRO, SciPy) to facilitate integration with established workflows in robotics. Further benefits of OpTaS are highlighted through a thorough comparison with common libraries. An additional key advantage of OpTaS is the ability to define optimal control tasks in the joint space, task space, or indeed simultaneously. The code for OpTaS is easily installed via pip, and the source code with examples can be found at https://github.com/cmower/optas.

cs.RO↗

arXiv2022

Oflib: Facilitating Operations with and on Optical Flow Fields in Python

We present a robust theoretical framework for the characterisation and manipulation of optical flow, i.e 2D vector fields, in the context of their use in motion estimation algorithms and beyond. The definition of two frames of reference guides the mathematical derivation of flow field application, inversion, evaluation, and composition operations. This structured approach is then used as the foundation for an implementation in Python 3, with the fully differentiable PyTorch version oflibpytorch supporting back-propagation as required for deep learning. We verify the flow composition method empirically and provide a working example for its application to optical flow ground truth in synthetic training data creation. All code is publicly available.

cs.CV↗

arXiv2022

ROS-PyBullet Interface: A Framework for Reliable Contact Simulation and Human-Robot Interaction

Reliable contact simulation plays a key role in the development of (semi-)autonomous robots, especially when dealing with contact-rich manipulation scenarios, an active robotics research topic. Besides simulation, components such as sensing, perception, data collection, robot hardware control, human interfaces, etc. are all key enablers towards applying machine learning algorithms or model-based approaches in real world systems. However, there is a lack of software connecting reliable contact simulation with the larger robotics ecosystem (i.e. ROS, Orocos), for a more seamless application of novel approaches, found in the literature, to existing robotic hardware. In this paper, we present the ROS-PyBullet Interface, a framework that provides a bridge between the reliable contact/impact simulator PyBullet and the Robot Operating System (ROS). Furthermore, we provide additional utilities for facilitating Human-Robot Interaction (HRI) in the simulated environment. We also present several use-cases that highlight the capabilities and usefulness of our framework. Please check our video, source code, and examples included in the supplementary material. Our full code base is open source and can be found at https://github.com/cmower/ros_pybullet_interface.

cs.RO↗

arXiv2022

Multi-scale and Cross-scale Contrastive Learning for Semantic Segmentation

This work considers supervised contrastive learning for semantic segmentation. We apply contrastive learning to enhance the discriminative power of the multi-scale features extracted by semantic segmentation networks. Our key methodological insight is to leverage samples from the feature spaces emanating from multiple stages of a model's encoder itself requiring neither data augmentation nor online memory banks to obtain a diverse set of samples. To allow for such an extension we introduce an efficient and effective sampling process, that enables applying contrastive losses over the encoder's features at multiple scales. Furthermore, by first mapping the encoder's multi-scale representations to a common feature space, we instantiate a novel form of supervised local-global constraint by introducing cross-scale contrastive learning linking high-resolution local features to low-resolution global features. Combined, our multi-scale and cross-scale contrastive losses boost performance of various models (DeepLabV3, HRNet, OCRNet, UPerNet) with both CNN and Transformer backbones, when evaluated on 4 diverse datasets from natural (Cityscapes, PascalContext, ADE20K) but also surgical (CaDIS) domains. Our code is available at https://github.com/RViMLab/MS_CS_ContrSeg. datasets from natural (Cityscapes, PascalContext, ADE20K) but also surgical (CaDIS) domains.

cs.CV↗

arXiv2022

2020 CATARACTS Semantic Segmentation Challenge

Surgical scene segmentation is essential for anatomy and instrument localization which can be further used to assess tissue-instrument interactions during a surgical procedure. In 2017, the Challenge on Automatic Tool Annotation for cataRACT Surgery (CATARACTS) released 50 cataract surgery videos accompanied by instrument usage annotations. These annotations included frame-level instrument presence information. In 2020, we released pixel-wise semantic annotations for anatomy and instruments for 4670 images sampled from 25 videos of the CATARACTS training set. The 2020 CATARACTS Semantic Segmentation Challenge, which was a sub-challenge of the 2020 MICCAI Endoscopic Vision (EndoVis) Challenge, presented three sub-tasks to assess participating solutions on anatomical structure and instrument segmentation. Their performance was assessed on a hidden test set of 531 images from 10 videos of the CATARACTS test set.

eess.IV↗

arXiv2021

Deep Homography Estimation in Dynamic Surgical Scenes for Laparoscopic Camera Motion Extraction

Current laparoscopic camera motion automation relies on rule-based approaches or only focuses on surgical tools. Imitation Learning (IL) methods could alleviate these shortcomings, but have so far been applied to oversimplified setups. Instead of extracting actions from oversimplified setups, in this work we introduce a method that allows to extract a laparoscope holder's actions from videos of laparoscopic interventions. We synthetically add camera motion to a newly acquired dataset of camera motion free da Vinci surgery image sequences through a novel homography generation algorithm. The synthetic camera motion serves as a supervisory signal for camera motion estimation that is invariant to object and tool motion. We perform an extensive evaluation of state-of-the-art (SOTA) Deep Neural Networks (DNNs) across multiple compute regimes, finding our method transfers from our camera motion free da Vinci surgery dataset to videos of laparoscopic interventions, outperforming classical homography estimation approaches in both, precision by 41%, and runtime on a CPU by 43%.

eess.IV↗

arXiv2021

Homography-based Visual Servoing with Remote Center of Motion for Semi-autonomous Robotic Endoscope Manipulation

The dominant visual servoing approaches in Minimally Invasive Surgery (MIS) follow single points or adapt the endoscope's field of view based on the surgical tools' distance. These methods rely on point positions with respect to the camera frame to infer a control policy. Deviating from the dominant methods, we formulate a robotic controller that allows for image-based visual servoing that requires neither explicit tool and camera positions nor any explicit image depth information. The proposed method relies on homography-based image registration, which changes the automation paradigm from point-centric towards surgical-scene-centric approach. It simultaneously respects a programmable Remote Center of Motion (RCM). Our approach allows a surgeon to build a graph of desired views, from which, once built, views can be manually selected and automatically servoed to irrespective of robot-patient frame transformation changes. We evaluate our method on an abdominal phantom and provide an open source ROS Moveit integration for use with any serial manipulator.

eess.IV↗

arXiv2021

Effective semantic segmentation in Cataract Surgery: What matters most?

Our work proposes neural network design choices that set the state-of-the-art on a challenging public benchmark on cataract surgery, CaDIS. Our methodology achieves strong performance across three semantic segmentation tasks with increasingly granular surgical tool class sets by effectively handling class imbalance, an inherent challenge in any surgical video. We consider and evaluate two conceptually simple data oversampling methods as well as different loss functions. We show significant performance gains across network architectures and tasks especially on the rarest tool classes, thereby presenting an approach for achieving high performance when imbalanced granular datasets are considered. Our code and trained models are available at https://github.com/RViMLab/MICCAI2021_Cataract_semantic_segmentation and qualitative results on unseen surgical video can be found at https://youtu.be/twVIPUj1WZM.

cs.CV↗

arXiv2018

Requirements and Design Methodology for a Spatio-Angular Vitreoretinal Surgical Microscope

This paper presents the requirements and design methodology for a vitreoretinal surgical microscope based on plenoptic imaging. The design parameters of the imaging lens, micro-lens array, and sensor are specified. The proposed design provides an extended depth imaging range when compared to proof-of-concept systems based on a commercial plenoptic sensor, and serves as the guideline for the implementation of clinically relevant surgical microscopes.

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