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Clément Pernet

Publications and source records attributed to Clément Pernet.

32 records · Page 2Linked to original sources
arXiv2014

Sparse Polynomial Interpolation Codes and their decoding beyond half the minimal distance

We present algorithms performing sparse univariate polynomial interpolation with errors in the evaluations of the polynomial. Based on the initial work by Comer, Kaltofen and Pernet [Proc. ISSAC 2012], we define the sparse polynomial interpolation codes and state that their minimal distance is precisely the length divided by twice the sparsity. At ISSAC 2012, we have given a decoding algorithm for as much as half the minimal distance and a list decoding algorithm up to the minimal distance. Our new polynomial-time list decoding algorithm uses sub-sequences of the received evaluations indexed by a linear progression, allowing the decoding for a larger radius, that is, more errors in the evaluations while returning a list of candidate sparse polynomials. We quantify this improvement for all typically small values of number of terms and number of errors, and provide a worst case asymptotic analysis of this improvement. For instance, for sparsity T = 5 with up to 10 errors we can list decode in polynomial-time from 74 values of the polynomial with unknown terms, whereas our earlier algorithm required 2T (E + 1) = 110 evaluations. We then propose two variations of these codes in characteristic zero, where appropriate choices of values for the variable yield a much larger minimal distance: the length minus twice the sparsity.

cs.SC↗
arXiv2014

Parallel computation of echelon forms

We propose efficient parallel algorithms and implementations on shared memory architectures of LU factorization over a finite field. Compared to the corresponding numerical routines, we have identified three main difficulties specific to linear algebra over finite fields. First, the arithmetic complexity could be dominated by modular reductions. Therefore, it is mandatory to delay as much as possible these reductions while mixing fine-grain parallelizations of tiled iterative and recursive algorithms. Second, fast linear algebra variants, e.g., using Strassen-Winograd algorithm, never suffer from instability and can thus be widely used in cascade with the classical algorithms. There, trade-offs are to be made between size of blocks well suited to those fast variants or to load and communication balancing. Third, many applications over finite fields require the rank profile of the matrix (quite often rank deficient) rather than the solution to a linear system. It is thus important to design parallel algorithms that preserve and compute this rank profile. Moreover, as the rank profile is only discovered during the algorithm, block size has then to be dynamic. We propose and compare several block decomposition: tile iterative with left-looking, right-looking and Crout variants, slab and tile recursive. Experiments demonstrate that the tile recursive variant performs better and matches the performance of reference numerical software when no rank deficiency occur. Furthermore, even in the most heterogeneous case, namely when all pivot blocks are rank deficient, we show that it is possbile to maintain a high efficiency.

cs.SC↗
arXiv2013

Simultaneous computation of the row and column rank profiles

Gaussian elimination with full pivoting generates a PLUQ matrix decomposition. Depending on the strategy used in the search for pivots, the permutation matrices can reveal some information about the row or the column rank profiles of the matrix. We propose a new pivoting strategy that makes it possible to recover at the same time both row and column rank profiles of the input matrix and of any of its leading sub-matrices. We propose a rank-sensitive and quad-recursive algorithm that computes the latter PLUQ triangular decomposition of an m \times n matrix of rank r in O(mnr^{ω-2}) field operations, with ωthe exponent of matrix multiplication. Compared to the LEU decomposition by Malashonock, sharing a similar recursive structure, its time complexity is rank sensitive and has a lower leading constant. Over a word size finite field, this algorithm also improveLs the practical efficiency of previously known implementations.

math.NA↗
arXiv2012

On the decoding of quasi-BCH codes

In this paper we investigate the structure of quasi-BCH codes. In the first part of this paper we show that quasi-BCH codes can be derived from Reed-Solomon codes over square matrices extending the known relation about classical BCH and Reed-Solomon codes. This allows us to adapt the Welch-Berlekamp algorithm to quasi-BCH codes. In the second part of this paper we show that quasi-BCH codes can be seen as subcodes of interleaved Reed-Solomon codes over finite fields. This provides another approach for decoding quasi-BCH codes.

cs.IT↗
arXiv2012

Rank-profile revealing Gaussian elimination and the CUP matrix decomposition

Transforming a matrix over a field to echelon form, or decomposing the matrix as a product of structured matrices that reveal the rank profile, is a fundamental building block of computational exact linear algebra. This paper surveys the well known variations of such decompositions and transformations that have been proposed in the literature. We present an algorithm to compute the CUP decomposition of a matrix, adapted from the LSP algorithm of Ibarra, Moran and Hui (1982), and show reductions from the other most common Gaussian elimination based matrix transformations and decompositions to the CUP decomposition. We discuss the advantages of the CUP algorithm over other existing algorithms by studying time and space complexities: the asymptotic time complexity is rank sensitive, and comparing the constants of the leading terms, the algorithms for computing matrix invariants based on the CUP decomposition are always at least as good except in one case. We also show that the CUP algorithm, as well as the computation of other invariants such as transformation to reduced column echelon form using the CUP algorithm, all work in place, allowing for example to compute the inverse of a matrix on the same storage as the input matrix.

cs.MS↗
arXiv2011

Efficient Dense Gaussian Elimination over the Finite Field with Two Elements

In this work we describe an efficient implementation of a hierarchy of algorithms for Gaussian elimination upon dense matrices over the field with two elements. We discuss both well-known and new algorithms as well as our implementations in the M4RI library, which has been adopted into Sage. The focus of our discussion is a block iterative algorithm for PLE decomposition which is inspired by the M4RI algorithm. The implementation presented in this work provides considerable performance gains in practice when compared to the previously fastest implementation. We provide performance figures on x86_64 CPUs to demonstrate the alacrity of our approach.

cs.MS↗
arXiv2010

LinBox founding scope allocation, parallel building blocks, and separate compilation

To maximize efficiency in time and space, allocations and deallocations, in the exact linear algebra library \linbox, must always occur in the founding scope. This provides a simple lightweight allocation model. We present this model and its usage for the rebinding of matrices between different coefficient domains. We also present automatic tools to speed-up the compilation of template libraries and a software abstraction layer for the introduction of transparent parallelism at the algorithmic level.

cs.SE↗
arXiv2010

Efficient Decomposition of Dense Matrices over GF(2)

In this work we describe an efficient implementation of a hierarchy of algorithms for the decomposition of dense matrices over the field with two elements (GF(2)). Matrix decomposition is an essential building block for solving dense systems of linear and non-linear equations and thus much research has been devoted to improve the asymptotic complexity of such algorithms. In this work we discuss an implementation of both well-known and improved algorithms in the M4RI library. The focus of our discussion is on a new variant of the M4RI algorithm - denoted MMPF in this work -- which allows for considerable performance gains in practice when compared to the previously fastest implementation. We provide performance figures on x86_64 CPUs to demonstrate the viability of our approach.

cs.MS↗
arXiv2009

Memory efficient scheduling of Strassen-Winograd's matrix multiplication algorithm

We propose several new schedules for Strassen-Winograd's matrix multiplication algorithm, they reduce the extra memory allocation requirements by three different means: by introducing a few pre-additions, by overwriting the input matrices, or by using a first recursive level of classical multiplication. In particular, we show two fully in-place schedules: one having the same number of operations, if the input matrices can be overwritten; the other one, slightly increasing the constant of the leading term of the complexity, if the input matrices are read-only. Many of these schedules have been found by an implementation of an exhaustive search algorithm based on a pebble game.

cs.MS↗
arXiv2009

On finding multiplicities of characteristic polynomial factors of black-box matrices

We present algorithms and heuristics to compute the characteristic polynomial of a matrix given its minimal polynomial. The matrix is represented as a black-box, i.e., by a function to compute its matrix-vector product. The methods apply to matrices either over the integers or over a large enough finite field. Experiments show that these methods perform efficiently in practice. Combined in an adaptive strategy, these algorithms reach significant speedups in practice for some integer matrices arising in an application from graph theory.

cs.SC↗
arXiv2009

Dense Linear Algebra over Finite Fields: the FFLAS and FFPACK packages

In the past two decades, some major efforts have been made to reduce exact (e.g. integer, rational, polynomial) linear algebra problems to matrix multiplication in order to provide algorithms with optimal asymptotic complexity. To provide efficient implementations of such algorithms one need to be careful with the underlying arithmetic. It is well known that modular techniques such as the Chinese remainder algorithm or the p-adic lifting allow very good practical performance, especially when word size arithmetic are used. Therefore, finite field arithmetic becomes an important core for efficient exact linear algebra libraries. In this paper, we study high performance implementations of basic linear algebra routines over word size prime fields: specially the matrix multiplication; our goal being to provide an exact alternate to the numerical BLAS library. We show that this is made possible by a carefull combination of numerical computations and asymptotically faster algorithms. Our kernel has several symbolic linear algebra applications enabled by diverse matrix multiplication reductions: symbolic triangularization, system solving, determinant and matrix inverse implementations are thus studied.

cs.SC↗
arXiv2006

Computing the Kalman form

We present two algorithms for the computation of the Kalman form of a linear control system. The first one is based on the technique developed by Keller-Gehrig for the computation of the characteristic polynomial. The cost is a logarithmic number of matrix multiplications. To our knowledge, this improves the best previously known algebraic complexity by an order of magnitude. Then we also present a cubic algorithm proven to more efficient in practice.

cs.SC↗
arXiv2005

Efficient Computation of the Characteristic Polynomial

This article deals with the computation of the characteristic polynomial of dense matrices over small finite fields and over the integers. We first present two algorithms for the finite fields: one is based on Krylov iterates and Gaussian elimination. We compare it to an improvement of the second algorithm of Keller-Gehrig. Then we show that a generalization of Keller-Gehrig's third algorithm could improve both complexity and computational time. We use these results as a basis for the computation of the characteristic polynomial of integer matrices. We first use early termination and Chinese remaindering for dense matrices. Then a probabilistic approach, based on integer minimal polynomial and Hensel factorization, is particularly well suited to sparse and/or structured matrices.

cs.SC↗