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Colin Gates

Publications and source records attributed to Colin Gates.

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White Paper on Phototrophic Biosignatures: Research Priorities for the Search for Life on Other Worlds

Photosynthesis is of prime interest in the telescopic search for life beyond the Solar System, because, on Earth, oxygenic photosynthesis produces two strong "biosignatures," global scale signs of life that can be seen from space: atmospheric oxygen and the Vegetation Red Edge (VRE). The VRE is the spectral reflectance signature of plant leaves, characterized by a step-like increase in reflectance from the red to the near-infrared. The absorption in the red is due to chlorophyll $\textit{a}$ (Chl $\textit{a}$). While Chl $\textit{a}$ dominates our planet, the Earth harbors diverse phototrophic organisms in niche environments possessing other pigments that produce edge-like spectral features across the UV-VIS-NIR, naturally suggesting diverse signatures that could be found on other planets where phototrophic life is adapted to other stars. However, the astrobiology community is very much at an early stage in its ability to constrain the probability that an observation of another planet has detected a sign of photosynthetic life. This white paper identifies critical research questions to advance to a predictive capability the search for phototrophic biosignatures. These questions pertain to the origins, key features, diversity, and potential for alternative adaptations in fundamental aspects of light harvesting; the electron transfer pathway in photosynthesis; rhodopsin-based proton-pumping; and carbon fixation. We discuss the need to constrain how evolution and ecology affect the scaling up of these molecular mechanisms to be potentially detectable by a direct imaging mission. The research questions and recommendations presented here are cross-linked to those posed by the NASA Astrobiology Strategy 2015, and to the Focus Areas of the upcoming NASA Decadal Astrobiology Exploration Strategy (DARES).

astro-ph.IM

Photosynthetically-powered phototactic active nematic fluids and gels

One of the most ancient forms of life dating to ~3.5 billion years ago, cyanobacteria are highly abundant organisms that convert light into energy and motion, often within conjoined filaments and larger colonies. We study how gradients of light intensity trigger orderly phototactic motions and dense bacterial communities, which remained quantitatively unexplored despite being among the oldest forms of active living matter on Earth. The phototaxis drives a transition from initially polar motions of semiflexible long filaments along complex curved spatiotemporal trajectories confined within illuminated areas to their bipolar motility in the ensuing crowded environment. We demonstrate how simply shining light causes a spontaneous self-assembly of two- and three-dimensional active nematic states of cyanobacterial filaments, with a plethora of motile and static topological defects. We quantify light-controlled evolutions of orientational and velocity order parameters during the transition between disordered and orientationally ordered states of our photosynthetic active matter, as well as the subsequent active nematic's fluid-gel transformation. Patterned illumination and foreign inclusions with different shapes interact with cyanobacterial active nematics in nontrivial ways, while inducing soft interfacial boundary conditions and quasi-boojum-like defects. Commanding this cyanobacterial collective behavior could aid inhibiting generation of toxins or enhancing production of oxygen and biomaterials.

cond-mat.soft