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Conghui He

Publications and source records attributed to Conghui He.

At least 37 records · Page 2Linked to original sources
arXiv2026

OmniOpt: Taxonomy, Geometry, and Benchmarking of Modern Optimizers

Optimizer selection for large-scale model training has become a system-level design decision constrained jointly by compute, memory, tuning budget, and task diversity, yet the landscape of over one hundred methods remains fragmented. We therefore present OmniOpt, a unified survey and benchmark cookbook of optimizers for the research community. OmniOpt rests on four coupled components. First, we treat every optimizer update as a structured transformation through a five-stage meta-pipeline, and show that most methods engage only one or two of these stages. Second, we use norm-constrained linear minimization oracles (LMOs) to unify different optimizers. Third, these two views ground a dual-dimension taxonomy, one dimension assigning each method to a mechanism family and the other recording the measurable training objectives it aims to improve. Fourth, and at the core of this paper, we instantiate the full taxonomy in a unified cross-domain benchmark spanning representative optimizers, model scales, and training regimes from language model pretraining to image classification, systematically analyzing each method family across multiple effect objectives and laying out their trade-offs. OmniOpt thus supplies the research community with an operational coordinate system for selecting optimizers under explicit mechanism and objective assumptions, and charts a direction for the future development of the optimizer community.

cs.LG↗
arXiv2026

Reinforcement Learning for Evidence-Seeking Diagnostic Reasoning with Large Language Models

Recent reasoning-centric Large Language Models (LLMs) have made significant strides, yet they predominantly operate on a passive-inference pattern that assumes complete information. In contrast, real-world clinical intelligence is inherently an iterative investigative process requiring strategic evidence acquisition. To bridge this gap, we formalize medical diagnosis as an Iterative Evidence-Seeking Task. We leverage Reinforcement Learning with Verifiable Rewards (RLVR) to elicit intrinsic reasoning within a closed-loop environment, guided by a novel suite of rewards that enforce diagnostic precision and examination consistency. To facilitate this, we introduce the Retrieval-Augmented Generation-based Examination Simulator (RAGES), a high-fidelity clinical oracle that provides realistic, knowledge-grounded follow-up evidence. Empirical results across diverse datasets demonstrate that our framework enables LLMs to transition from passive responders to autonomous assistants. Notably, our model demonstrates comparable performance to larger and reasoning-enhanced baselines, while RAGES proves superior to vanilla LLMs in generating biologically plausible clinical feedback.

cs.AI↗
arXiv2026

Exascale Hybrid Numerical-AI Ensembles for Operational Flood-Season Forecasting in East Asia: 15-km Decadal Hindcasts and 1-km High-Resolution Capability

Seasonal forecasting of summer rainfall in East Asia remains a grand challenge, as predictability at 3 to 6 month lead times is constrained by the spring predictability barrier, weak large-scale signals, and localized nonlinear convective extremes. We address this challenge with CAPES, which integrates a kilometer-resolution coupled regional model with atmosphere, land, and ocean components and a data-driven AI seasonal forecasting system. At 15 km resolution, the fused workflow combines 174 numerical members from varying start times, physics schemes, and parameter perturbations with 1,600 AI members generated from initial and physical perturbations. Using the full LineShine system, CAPES completes ten annual 1,774-member hindcasts for 2016 to 2025 within 14.6 hours, improving the mean prediction score from ECMWF's 71.8 to 75.9 and delivering a major gain in operational forecasting capability. The 1-km configuration further enables fine-scale typhoon simulation and establishes the feasibility of kilometer-scale fused ensemble forecasting on a one-week timescale.

cs.CE↗
arXiv2026

OmniCoT: A Benchmark for Global and Multi-Step Panoramic Reasoning

Multimodal Large Language Models (MLLMs) have demonstrated promising spatial reasoning capabilities, while these abilities remain underexplored in the emerging visual modality of panoramic imagery. The full 360°$\times$180° field of view of panoramas essentially supports complex global multi-step reasoning, which is also the fundamental advantage of panoramas in applications such as embodied intelligence. However, existing panoramic benchmarks largely focus on simplistic queries that rely on local cues or single-/few-step reasoning, thereby ignoring the fundamental advantage of panoramas and failing to fully exploit their potential. To address this gap, we introduce OmniCoT, a panoramic spatial reasoning suite designed to enable MLLMs to use global evidence and perform multi-step inference across viewpoints. It includes OmniCoT-B (6.7K data) for evaluation, which measures both answer accuracy and reasoning quality, OmniCoT-Real (1K data) as a manually annotated real-world subset to quantify the Sim-to-Real gap. For training, OmniCoT-T (14.3K data) is purpose-built with structured stepwise Chain-of-Thought annotations that explicitly link intermediate reasoning steps to panoramic evidence. Based on OmniCoT-T, we introduce OmniCoT-R1 and adopt a two-stage training strategy tailored to the geometrically complex panoramic space, where Supervised Fine-tuning (SFT) anchors reasoning to panoramic evidence (e.g., bearings, proximity) and GRPO penalizes geometrically incoherent paths to consolidate global 360° spatial consistency. Through OmniCoT, we aim to recalibrate the difficulty of panoramic spatial reasoning to better align with the intrinsic capabilities of panoramic imagery, thereby fostering meaningful progress in this research area.

cs.CV↗
arXiv2026

BioMatrix: Towards a Comprehensive Biological Foundation Model Spanning the Modality Matrix of Sequences, Structures, and Language

We present BioMatrix, the first multimodal foundation model that natively integrates sequences, structures, and natural language for both molecules and proteins within a single decoder-only architecture. Existing biological foundation models pursue native multimodality and broad entity coverage separately: those that fuse multiple modalities under a shared objective remain confined to a single entity type, while those spanning multiple entity types either omit explicit structural modeling or rely on adapter-based designs in which the model cannot natively generate the very modalities it can read. BioMatrix closes this gap by mapping molecular sequences (supporting both SMILES and SELFIES notations), molecular structures, protein sequences, protein structures, and natural language into a shared discrete token space through a unified tokenization scheme, so that all modalities are consumed and produced uniformly under a single next-token prediction objective -- without external encoders, projection adapters, or modality-specific output heads. Built upon the Qwen3 language model (1.7B and 4B), BioMatrix is continually pretrained on 304.4 billion tokens spanning general and domain-specific text, sequence and structure views of molecules and proteins, and cross-modal corpora that interleave biomolecular entities with scientific text and link distinct entities through molecule-protein and protein-protein interaction data. After tuning on a comprehensive suite of downstream applications covering 80 tasks across 6 categories -- encompassing single-entity and multi-entity understanding and generation tasks across and within modalities -- BioMatrix achieves state-of-the-art or competitive performance on 77 out of 80 tasks, demonstrating that a single, natively multimodal generalist model can effectively match or surpass specialized approaches across a wide range of biological tasks.

cs.CL↗
arXiv2026

Pushing the Boundaries of Natural Reasoning: Interleaved Bonus from Formal-Logic Verification

Large Language Models (LLMs) show remarkable capabilities, yet their stochastic next-token prediction creates logical inconsistencies and reward hacking that formal symbolic systems avoid. To bridge this gap, we introduce a formal logic verification-guided framework that dynamically interleaves formal symbolic verification with the natural language generation process, providing real-time feedback to detect and rectify errors as they occur. Distinguished from previous neuro-symbolic methods limited by passive post-hoc validation, our approach actively penalizes intermediate fallacies during the reasoning chain. We operationalize this framework via a novel two-stage training pipeline that synergizes formal logic verification-guided supervised fine-tuning and policy optimization. Extensive evaluation on six benchmarks spanning mathematical, logical, and general reasoning demonstrates that our 7B and 14B models outperform state-of-the-art baselines by average margins of 10.4% and 14.2%, respectively. These results validate that formal verification can serve as a scalable mechanism to significantly push the performance boundaries of advanced LLM reasoning.

cs.LG↗
arXiv2026

Co-Scraper: query-aware DOM Pruning and Reusable Scraper Synthesis for Lightweight Web Data Extraction

The abundant and heterogeneous nature of web content necessitates automated information extraction, and generating scrapers that can be reused across similar web pages offers an effective solution for scalable data extraction. In this work, we propose Co-Scraper, a two-stage framework capable of handling the hierarchical complexity of long HTML documents. By integrating a query-aware DOM pruning mechanism with stable extraction strategy induction, Co-Scraper can effectively transforms web content into executable programmatic wrappers using a fine-tuned Qwen3-8B model. On the test set of SWDE, Co-Scraper achieves state-of-the-art performance with an F1 score of 94.78% and a reuse success rate of 90.39%. This framework significantly enhances the accuracy and resilience of data extraction, providing a highly efficient approach for web data acquisition tasks.

cs.IR↗
arXiv2026

FakeVLM-R1: Internalizing Physical Laws via CoT for Synthetic Image Detection

The development of generative artificial intelligence technologies has propelled the visual realism of synthetic images to an unprecedented level. Although current interpretable detection methods based on Large Multimodal Models (LMMs) have made certain progress, they still rely on imitation learning derived from massive volumes of forged data. Consequently, they lack genuine causal reasoning capabilities and are prone to explanatory hallucinations. To overcome this bottleneck, we propose FakeVLM-R1, aiming to endow the model with human-like critical thinking capabilities when performing synthetic detection tasks. Building upon Supervised Fine-Tuning (SFT), this framework integrates Group Relative Policy Optimization (GRPO) with a Critical Thinking Chain-of-Thought (CoT) mechanism. During the inference phase, the model executes a "bidirectional dialectical reasoning" process: while proposing a forgery hypothesis, it must simultaneously invoke physical commonsense to construct an authenticity counter-proof. Furthermore, we constructed the FakeClue++ dataset with high-quality samples, which extensively introduces annotations guided by the physical laws of authentic images, providing a unified authenticity anchor for the model. Experiments confirm that FakeVLM-R1 achieves SOTA performance the evaluated models across multiple benchmarks. It not only achieves high-precision, logically interpretable detection but also resolves the over-rejection bias of existing methods against real images, demonstrating generalization and robustness against perturbations.

cs.CV↗
arXiv2026

DataPrep-Bench: Benchmarking LLMs as Training Data Preparators

The quality of training data fundamentally determines the capabilities of large language models (LLMs), yet no unified benchmark exists to measure how well LLMs, agents, and data-centric workflows actually prepare training data end to end. We view LLM-driven data preparation as comprising two complementary capabilities: data construction, which transforms raw sources into supervised training data, and data quality evaluation, which predicts the training value of candidate datasets before downstream training; throughout, "quality" refers to downstream training utility rather than surface-level textual properties. We introduce DataPrep-Bench, the first unified benchmark that jointly evaluates both capabilities under a shared downstream-grounded protocol over six domains and multiple base models. For data construction, methods consume identical raw sources and are scored by fine-tuning a base model on their outputs jointly with Dolly-15k; alongside this track we release Data-Construction-Skill, a skill-guided agent that lifts the Dolly-only baseline by nearly 20 points absolute on Llama-3.1-8B Finance and is competitive with the strongest agent- and DataFlow-based methods in knowledge-extraction-dense domains. For data quality evaluation, scoring functions are scored by Pearson correlation with downstream performance on a shared candidate pool; we release the Distributional Alignment Score (DAS), a distribution-based evaluator that uses MMD between a candidate dataset and a domain proxy. DAS attains the strongest cross-model correlation in four of six domains and is the only metric clearing r > 0.70 simultaneously in Math, Science, and Medical, outperforming existing quality-, diversity-, and heuristic-based evaluators. DataPrep-Bench provides a unified, downstream-grounded framework for measuring progress on both capabilities as co-equal targets of LLM-driven data preparation.

cs.LG↗
arXiv2026

NanoResearch: Co-Evolving Skills, Memory, and Policy for Personalized Research Automation

LLM-powered multi-agent systems can now automate the full research pipeline from ideation to paper writing, but a fundamental question remains: automation for whom? Researchers operate under different resource configurations, hold different methodological preferences, and target different output formats. A system that produces uniform outputs regardless of these differences will systematically under-serve every individual user, making personalization a precondition for research automation to be genuinely usable. However, achieving it requires three capabilities that current systems lack: accumulating reusable procedural knowledge across projects, retaining user-specific experience across sessions, and internalizing implicit preferences that resist explicit formalization. We propose NanoResearch, a multi-agent framework that addresses these gaps through tri-level co-evolution. A skill bank distills recurring operations into compact procedural rules reusable across projects. A memory module maintains user- and project-specific experience that grounds planning decisions in each user's research history. A label-free policy learning converts free-form feedback into persistent parameter updates of the planner, reshaping subsequent coordination. These three layers co-evolve: reliable skills produce richer memory, richer memory informs better planning, and preference internalization continuously realigns the loop to each user. Extensive experiments demonstrate that NanoResearch delivers substantial gains over state-of-the-art AI research systems, and progressively refines itself to produce better research at lower cost over successive cycles.

cs.AI↗
arXiv2026

PAGER: Bridging the Semantic-Execution Gap in Point-Precise Geometric GUI Control

Large vision-language models have significantly advanced GUI agents, enabling executable interaction across web, mobile, and desktop interfaces. Yet these gains largely rely on a forgiving region-tolerant paradigm, where many nearby pixels inside the same component remain valid. Precise geometric construction breaks this assumption: actions must land on points in continuous canvas space rather than tolerant regions. Because geometric primitives carry ontological dependencies, a local coordinate error can induce cascading topological failures that distort downstream objects and invalidate the final construction. We identify this regime as precision-sensitive GUI tasks, requiring point-level accuracy, geometry-aware verification, and robustness to dependency-driven error propagation. To benchmark it, we introduce PAGE Bench, with 4,906 problems and over 224K process-supervised, pixel-level GUI actions. We further propose PAGER, a topology-aware agent that decomposes construction into dependency-structured planning and pixel-level execution. Pixel-grounded supervised tuning establishes executable action grammar, while precision-aligned reinforcement learning mitigates rollout-induced exposure bias through state-conditioned geometric feedback. Experiments reveal a pronounced Semantic-Execution Gap: general multimodal models can exceed 88% action type accuracy yet remain below 6% task success. PAGER closes this gap, delivering 4.1x higher task success than the strongest evaluated general baseline and raising step success rate from below 9% for GUI-specialized agents to over 62%, establishing a new state of the art for point-precise GUI control.

cs.AI↗
arXiv2026

CiteVQA: Benchmarking Evidence Attribution for Trustworthy Document Intelligence

Multimodal Large Language Models (MLLMs) have significantly advanced document understanding, yet current Doc-VQA evaluations score only the final answer and leave the supporting evidence unchecked. This answer-only approach masks a critical failure mode: a model can land on the correct answer while grounding it in the wrong passage -- a critical risk in high-stakes domains like law, finance, and medicine, where every conclusion must be traceable to a specific source region. To address this, we introduce CiteVQA, a benchmark that requires models to return element-level bounding-box citations alongside each answer, evaluating both jointly. CiteVQA comprises 1,897 questions across 711 PDFs spanning seven domains and two languages, averaging 40.6 pages per document. To ensure fidelity and scalability, the ground-truth citations are generated by an automated pipeline-which identifies crucial evidence via masking ablation-and are subsequently validated through expert review. At the core of our evaluation is Strict Attributed Accuracy (SAA), which credits a prediction only when the answer and the cited region are both correct. Auditing 20 MLLMs reveals a pervasive Attribution Hallucination: models frequently produce the right answer while citing the wrong region. The strongest system (Gemini-3.1-Pro-Preview) achieves an SAA of only 76.0, and the strongest open-source MLLM reaches just 22.5. Ultimately, towards trustworthy document intelligence, CiteVQA exposes a reliability gap that answer-only evaluations overlook, providing the instrumentation needed to close it. Our repository is available at https://github.com/opendatalab/CiteVQA.

cs.CL↗
arXiv2026

Respecting Self-Uncertainty in On-Policy Self-Distillation for Efficient LLM Reasoning

On-policy self-distillation trains a reasoning model on its own rollouts while a teacher, often the same model conditioned on privileged context, provides dense token-level supervision. Existing objectives typically weight the teacher's token-level signal uniformly across a chain-of-thought sequence, despite substantial variation in the entropy of the teacher's predictive distribution. We propose EGRSD (Entropy-Guided Reinforced Self-Distillation), which unifies token-level updates through three signals: a reward-grounded direction, a teacher-student likelihood-ratio magnitude, and the proposed teacher-entropy confidence gate that down-weights high-entropy token positions while maintaining a nonzero lower bound on every token weight. We further introduce CL-EGRSD, a causal-lookahead variant that distinguishes sustained high-entropy spans from transient high-entropy positions whose following context rapidly becomes low entropy. Experiments with Qwen3-4B and Qwen3-8B in thinking mode show that EGRSD and CL-EGRSD advance the accuracy-length frontier among the compared trainable methods.

cs.AI↗
arXiv2026

PaperFit: Vision-in-the-Loop Typesetting Optimization for Scientific Documents

A LaTeX manuscript that compiles without error is not necessarily publication-ready. The resulting PDFs frequently suffer from misplaced floats, overflowing equations, inconsistent table scaling, widow and orphan lines, and poor page balance, forcing authors into repetitive compile-inspect-edit cycles. Rule-based tools are blind to rendered visuals, operating only on source code and log files. Text-only LLMs perform open-loop text editing, unable to predict or verify the two-dimensional layout consequences of their changes. Reliable typesetting optimization therefore requires a visual closed loop with verification after every edit. We formalize this problem as Visual Typesetting Optimization (VTO), the task of transforming a compilable LaTeX paper into a visually polished, page-budget-compliant PDF through iterative visual verification and source-level revision, and introduce a five-category taxonomy of typesetting defects to guide diagnosis. We present PaperFit, a vision-in-the-loop agent that iteratively renders pages, diagnoses defects, and applies constrained repairs. To benchmark VTO, we construct PaperFit-Bench with 200 papers across 10 venue templates and 13 defect types at different difficulty. Extensive experiments show that PaperFit outperforms all baselines by a large margin, establishing that bridging the gap from compilable source to publication-ready PDF requires vision-in-the-loop optimization and that VTO constitutes a critical missing stage in the document automation pipeline.

cs.AI↗
arXiv2026

MolRecBench-Wild: A Real-World Benchmark for Optical Chemical Structure Recognition

Optical Chemical Structure Recognition (OCSR) aims to translate molecular diagrams in scientific literature into machine-readable formats, but current systems remain unreliable on real-world images due to substantial visual and chemical complexity. We introduce MOSAIC, a dual-dimensional difficulty framework with 37 fine-grained labels that jointly characterize visual interference and chemical semantic challenges in molecular diagrams. Based on this framework, we construct MolRecBench-Wild, a benchmark of 5,029 structures from 820 recent chemistry papers, covering the full difficulty spectrum observed in real publications. To enable faithful semantic evaluation beyond SMILES and MolFile, we propose CARBON, a representation language capable of expressing valence variations, icon-based groups, and other non-standard chemical semantics. We further adopt a dual-track evaluation protocol supporting both CARBON and SMILES outputs for broad model compatibility. Comprehensive experiments over 18 OCSR-capable models reveal severe performance degradation on MolRecBench-Wild, exposing a large gap between previous patent benchmarks and real-world academic scenarios.

cs.AI↗
arXiv2026

Intern-Atlas: A Methodological Evolution Graph as Research Infrastructure for AI Scientists

Existing research infrastructure is fundamentally document-centric, providing citation links between papers but lacking explicit representations of methodological evolution. In particular, it does not capture the structured relationships that explain how and why research methods emerge, adapt, and build upon one another. With the rise of AI-driven research agents as a new class of consumers of scientific knowledge, this limitation becomes increasingly consequential, as such agents cannot reliably reconstruct method evolution topologies from unstructured text. We introduce Intern-Atlas, a methodological evolution graph that automatically identifies method-level entities, infers lineage relationships among methodologies, and captures the bottlenecks that drive transitions between successive innovations. Built from 1,030,314 papers spanning AI conferences, journals, and arXiv preprints, the resulting graph comprises 9,410,201 semantically typed edges, each grounded in verbatim source evidence, forming a queryable causal network of methodological development. To operationalize this structure, we further propose a self-guided temporal tree search algorithm for constructing evolution chains that trace the progression of methods over time. We evaluate the quality of the resulting graph against expert-curated ground-truth evolution chains and observe strong alignment. In addition, we demonstrate that Intern-Atlas enables downstream applications in idea evaluation and automated idea generation. We position methodological evolution graphs as a foundational data layer for the emerging automated scientific discovery.

cs.AI↗
arXiv2026

FLARE: Fully Integration of Vision-Language Representations for Deep Cross-Modal Understanding

We introduce FLARE, a family of vision language models (VLMs) with a fully vision-language alignment and integration paradigm. Unlike existing approaches that rely on single MLP projectors for modality alignment and defer cross-modal interaction to LLM decoding, FLARE achieves deep, dynamic integration throughout the pipeline. Our key contributions include: (1) Text-Guided Vision Encoding that incorporates textual information during vision encoding to achieve pixel-level alignment; (2) Context-Aware Alignment Decoding that aggregates visual features conditioned on textual context during decoding for query-level integration; (3) Dual-Semantic Mapping Loss to supervise feature mapping from both modalities and enable modality-level bridging; and (4) Text-Driven VQA Synthesis that leverages high-quality text to generate VQA pairs and synthesize corresponding images, enabling data-level optimization. We train FLARE at 3B and 8B scales under both fixed and dynamic resolution settings, demonstrating that our full-modality alignment significantly outperforms existing methods while maintaining strong generalizability. FLARE 3B surpasses Cambrian-1 8B and Florence-VL 8B using only 630 vision tokens. Ablation studies reveal that FLARE achieves superior performance over existing methods with minimal computational cost. Even without dynamic resolution, FLARE outperforms LLaVA-NeXT, validating the effectiveness of our approach. We release our code, model weights, and dataset in https://github.com/starriver030515/FLARE.

cs.CV↗
arXiv2026

Heterogeneous Adaptive Policy Optimization: Tailoring Optimization to Every Token's Nature

Using entropy as a measure of heterogeneity to guide optimization has emerged as a crucial research direction in Reinforcement Learning for LLMs. However, existing methods typically treat it as a discrete filter or post-hoc regulator rather than a core optimization driver. To fully leverage the potential of entropy and achieve fine-grained regulation, we introduce Heterogeneous Adaptive Policy Optimization (HAPO), a token-aware algorithm that continuously adapts optimization dynamics based on token-level entropy throughout the entire training process. Our algorithm includes four key components: (1) Adaptive Temperature Sampling that adjusts sampling temperature in real time, promoting exploration at high-entropy tokens. (2) Token-Level Group Average Advantage Estimation that estimates advantages at token level, accounting for sequence-length effects while preserving non-biased treatment.(3) Differential Advantage Redistribution that leverages entropy and importance ratios to adjust advantages for tokens with clear signals. (4) Asymmetric Adaptive Clipping that adynamically adjusts clipping boundaries based on token-level entropy. Through systematic investigation of entropy, we embed token-level treatment into every stage. Extensive experiments on mathematical reasoning, code, and logic tasks across multiple models demonstrate HAPO's consistent superiority over DAPO. Our code can be found in https://github.com/starriver030515/HAPO.

cs.CL↗