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Cristina Puzzarini

Publications and source records attributed to Cristina Puzzarini.

18 recordsLinked to original sources

High-Resolution Infrared Spectroscopy and ASAP Analysis of Cyclopentadiene: The Vibrational Modes below 860 cm$^{-1}$ and the $ν_{21}$ Mode at 961 cm$^{-1}$

The spectroscopic fingerprints of vibrationally excited states of astronomical molecules are interesting for multiple reasons. They are excellent temperature probes of the corresponding astronomical regions and are thought to be the origin of many unknown lines in astronomical survey spectra. Rovibrational spectra provide accurate vibrational energies and can guide subsequent pure rotational studies. The Automated Spectral Assignment Procedure (ASAP) greatly simplifies the rovibrational analysis when the rotational spectrum of either the upper or lower vibrational state is known with a high degree of accuracy (e.g., from a rotational analysis). Here, we present a new implementation of ASAP for the analysis of cyclopentadiene, a cyclic pure hydrocarbon that has already been detected astronomically toward the cold core of the Taurus Molecular Cloud. Using the synchrotron radiation extracted by the AILES beamline of the SOLEIL facility, we recorded mid- and far-infrared high-resolution spectra of cyclopentadiene. We analyzed the rovibrational spectrum of the $ν_{21}$ fundamental (961 cm$^{-1}$) with ASAP and used ASAP$^2$ to determine the vibrational energies of the eight vibrational modes below 860 cm$^{-1}$. ASAP$^2$ is an extension of ASAP for rovibrational bands where the rotational structures of the lower and upper states are known with high accuracy, leaving only the vibrational band center to be determined. The presented rovibrational fingerprints agree with the results from pure rotational spectroscopy, demonstrating the efficiency and reliability of our new ASAP implementation.

physics.chem-ph↗

Automated Exploration of Radical-Molecule Chemistry: The Case of Oxirane + CH in the ISM

Quantum chemistry provides accurate and reliable methods to investigate reaction pathways of reactive molecular systems relevant to the interstellar medium. However, the exhaustive exploration of a reactive network is often a daunting task, resulting in unexplored reactive channels that affect kinetic outcomes and branching ratios. Here, an automated workflow for exploring reactive potential energy surfaces (PESs) is employed for the first time to study the oxirane (C$_2$H$_4$O) plus methylidyne ($^.$CH) reaction. The ultimate goal is to comprehensively map its PES and, subsequently, derive rate constants for the most important reaction channels. In addition to its astrochemical relevance, this reaction has been considered because it is a challenging test case, its network being very extended, with 60 exothermic bimolecular products lying below the reactant's energy. Kinetic simulations indicate that the main product of the reaction is the HCO radical plus ethene (C$_2$H$_4$), while formation of s-trans-propenal (acrolein) and 2H-oxene is also possible, but to a lesser extent. Based on the present study and other references in the literature, we suggest that the slightly higher relative abundance of s-trans-propenal compared to methyl ketene in the interstellar medium is a gas-phase kinetic effect, s-trans-propenal being a more easily accessible product on the C$_3$H$_5$O$^.$ PES.

astro-ph.GA↗

Experimental and theoretical investigation on N2 pressure-induced coefficients of the lowest rotational transitions of HCN

We present the first experimental determination of room-temperature N2 pressure broadening, speed dependent broadening, and pressure shift coefficients of the three lowest rotational lines of HCN. The experimental results served to assess the accuracy of a low-cost yet accurate computational strategy, which relies on a simplified characterization of the HCN-N2 interaction potential, and employs a novel approximate method of solving the quantum scattering problem. Building on the validation of this computational approach, the dataset was extended to higher rotational transitions, up to J(HCN)=5-4. For these transitions, we provide the temperature dependence of the pressure broadening coefficient, its speed dependence parameter, and the Dicke narrowing parameter. This new dataset can support and refine the modeling of HCN in both the terrestrial and Titan's atmospheres. This work constitutes an important step towards populating spectroscopic databases with accurate HCN line-shape parameters.

physics.chem-ph↗

Formation of the glycine isomer glycolamide (NH$_2$C(O)CH$_2$OH) on the surfaces of interstellar ice grains: Insights from atomistic simulations

Syn-glycolamide, a glycine isomer, has recently been detected in the G+0.693-0.027 molecular cloud. Investigations on its formation in the interstellar medium could offer insights into synthetic routes leading to glycine in prebiotic environments. Quantum chemical simulations on glycolamide (NH$_2$C(O)CH$_2$OH) formation on interstellar ice mantles, mimicked by a water ice cluster model, are presented. Glycolamide synthesis has been here modeled considering a stepwise process: the coupling between formaldehyde (H$_2$CO) and the radical of formamide (NH$_2$CO$^{\bullet}$) occurs first, forming the glycolamide precursor NH$_2$C(O)CH$_2$O$^{\bullet}$, which is then hydrogenated to give anti-glycolamide. We hypothesize that anti-to-syn interconversion will occur in conjunction with glycolamide desorption from the ice surface. The reaction barrier for NH$_2$C(O)CH$_2$O$^{\bullet}$ formation varies from 9 to 26 kJ mol$^{-1}$, depending on surface binding sites. Kinetic studies indicate that this reaction step is feasible in environments with a $T > 35~\text{K}$, until desorption of the reactants. The hydrogenation step leading to anti-glycolamide presents almost no energy barrier due to the easy H atom diffusion towards the NH$_2$C(O)CH$_2$O$^{\bullet}$ intermediate. However, it competes with the extraction of an H atom from the formyl group of NH$_2$C(O)CH$_2$O$^{\bullet}$, which leads to formyl formamide, NH$_2$C(O)CHO, and H$_2$. Nonetheless, according to our results, anti-glycolamide formation is predicted to be the most favored reactive channel.

astro-ph.GA↗

Hyperfine resolved rate coefficients of HC17O+ with H2 (j = 0)

The formyl cation (HCO+) is one of the most abundant ions in molecular clouds and plays a major role in the interstellar chemistry. For this reason, accurate collisional rate coefficients for the rotational excitation of HCO+ and its isotopes due to the most abundant perturbing species in interstellar environments are crucial for non-local thermal equilibrium models and deserve special attention. In this work, we determined the first hyperfine resolved rate coefficients of HC17O+ in collision with H2 (j=0). Indeed, despite no scattering calculations on its collisional parameters have been performed so far, the HC17O+ isotope assumes a prominent role for astrophysical modelling applications. Computations are based on a new four dimensional (4D) potential energy surface, obtained at the CCSD(T)-F12a/aug-cc-pVQZ level of theory. A test on the corresponding cross section values pointed out that, to a good approximation, the influence of the coupling between rotational levels of H2 can be ignored. For this reason, the H2 collider has been treated as a spherical body and an average of the potential based on five orientations of H2 has been employed for scattering calculations. State-to-state rate coefficients resolved for the HC17O+ hyperfine structure for temperature ranging from 5 to 100 K have been computed using recoupling techniques. This study provides the first determination of HC17O+/H2 inelastic rate coefficients directly computed from full quantum close-coupling equations, thus supporting the reliability of future radiative transfer modellings of HC17O+ in interstellar environments.

astro-ph.GA↗

Precursors of fatty alcohols in the ISM: Discovery of n-propanol

Theories on the origins of life propose that early cell membranes were synthesized from amphiphilic molecules simpler than phospholipids such as fatty alcohols. The discovery in the interstellar medium (ISM) of ethanolamine, the simplest phospholipid head group, raises the question whether simple amphiphilic molecules are also synthesized in space. We investigate whether precursors of fatty alcohols are present in the ISM. For this, we have carried out a spectral survey at 7, 3, 2 and 1 mm toward the Giant Molecular Cloud G+0.693-0.027 located in the Galactic Center using the IRAM 30m and Yebes 40m telescopes. Here, we report the detection in the ISM of the primary alcohol n-propanol (in both conformers Ga-n-C3H7OH and Aa-n-C3H7OH), a precursor of fatty alcohols. The derived column densities of n-propanol are (5.5+-0.4)x10^13 cm^-2 for the Ga conformer and (3.4+-0.3)x10^13 cm^-2 for the Aa conformer, which imply molecular abundances of (4.1+-0.3)x10^-10 for Ga-n-C3H7OH and of (2.5+-0.2)x10^-10 for Aa-n-C3H7OH. We also searched for the AGa conformer of n-butanol (AGa-n-C4H9OH) without success yielding an upper limit to its abundance of <4.1x10^-11. The inferred CH3OH:C2H5OH:C3H7OH:C4H9OH abundance ratios go as 1:0.04:0.006:<0.0004 toward G+0.693-0.027, i.e. they decrease roughly by one order of magnitude for increasing complexity. We also report the detection of both syn and anti conformers of vinyl alcohol, with column densities of (1.11+-0.08)x10^14 cm^-2 and (1.3+-0.4)x10^13 cm^-2, and abundances of (8.2+-0.6)x10^-10 and (9.6+-3.0)x10^-11, respectively. The detection of n-propanol, together with the recent discovery of ethanolamine in the ISM, opens the possibility that precursors of lipids according to theories of the origin of life, could have been brought to Earth from outer space.

astro-ph.GA↗

Precursors of the RNA-world in space: Detection of ($Z$)-1,2-ethenediol in the interstellar medium, a key intermediate in sugar formation

We present the first detection of ($Z$)-1,2-ethenediol, (CHOH)$_2$, the enol form of glycolaldehyde, in the interstellar medium towards the G+0.693-0.027 molecular cloud located in the Galactic Center. We have derived a column density of (1.8$\pm$0.1)$\times$10$^{13}$ cm$^{-2}$, which translates into a molecular abundance with respect to molecular hydrogen of 1.3$\times$10$^{-10}$. The abundance ratio between glycolaldehyde and ($Z$)-1,2-ethenediol is $\sim$5.2. We discuss several viable formation routes through chemical reactions from precursors such as HCO, H$_2$CO, CHOH or CH$_2$CHOH. We also propose that this species might be an important precursor in the formation of glyceraldehyde (HOCH$_2$CHOHCHO) in the interstellar medium through combination with the hydroxymethylene (CHOH) radical.

astro-ph.GA↗

The junChS and junChS-F12 models: parameter-free efficient yet accurate composite schemes for energies and structures of non-covalent complexes

A recently developed model chemistry (denoted as junChS [Alessandrini et al J. Chem. Theory Comput. 2020, 16, 988-1006]) has been extended to the employment of explicitly-correlated (F12) methods. This led us to propose a family of effective, reliable and parameter-free schemes for the computation of accurate interaction energies of molecular complexes ruled by non-covalent interactions. A thorough benchmark based on a wide range of interactions showed that the so-called junChS-F12 model, which employs cost-effective revDSD-PBEP86-D3(BJ) reference geometries, has an improved performance with respect to its conventional counterpart and outperforms well-known model chemistries. Without employing any empirical parameter and at an affordable computational cost, junChS-F12 reaches sub-chemical accuracy. Accurate characterizations of molecular complexes are usually limited to energetics. To take a step forward, the conventional and F12 composite schemes developed for interaction energies have been extended to structural determinations. A benchmark study demonstrated that the most effective option is to add MP2-F12 core-valence correlation corrections to fc-CCSD(T)-F12/jun-cc-pVTZ geometries without the need of recovering the basis set superposition error and the extrapolation to the complete basis set.

physics.chem-ph↗

Formation of phosphorus monoxide (PO) in the interstellar medium: insights from quantum-chemical and kinetic calculations

In recent years, phosphorus monoxide (PO) -- an important molecule for prebiotic chemistry -- has been detected in star-forming regions and in the comet 67P/Churyumov-Gerasimenko. These studies have revealed that, in the interstellar medium, PO is systematically the most abundant P-bearing species, with abundances that are $\sim$1-3 times greater than those derived for phosphorus nitride (PN), the second most abundant P-containing molecule. The reason why PO is more abundant than PN remains still unclear. Experimental studies with phosphorus in the gas phase are not available, probably because of the difficulties in dealing with its compounds. Therefore, the reactivity of atomic phosphorus needs to be investigated using reliable computational tools. To this end, state-of-the-art quantum-chemical computations have been employed to evaluate accurate reaction rates and branching ratios for the P + OH $\rightarrow$ PO + H and P + H$_2$O $\rightarrow$ PO + H$_2$ reactions in the framework of a master equation approach based on ab-initio transition state theory. The hypothesis that OH and H${_2}$O can be potential oxidizing agents of atomic phosphorus is based on the ubiquitous presence of H${_2}$O in the ISM. Its destruction then produces OH, which is another very abundant species. While the reaction of atomic phosphorus in its gound state with water is not a relevant source of PO because of emerged energy barriers, the P + OH reaction represents an important formation route of PO in the interstellar medium. Our kinetic results show that this reaction follow an Arrhenius behavior, and thus its rate coefficients alpha=2.28$\times$10$^{-10}$ cm${^3}$ molecule$^{-1}$ s$^{-1}$, beta=0.16 and gamma=0.37 K increase by increasing the temperature.

astro-ph.GA↗

An improved rovibrational linelist of formaldehyde, \spec{h212c16o}

Published high-resolution rotation-vibration transitions of \spec{h212c16o}, the principal isotopologue of methanal, are analyzed using the MARVEL (Measured Active Rotation-Vibration Energy Levels) procedure. The literature results are augmented by new, high-accuracy measurements of pure rotational transitions within the ground, $ν_3$, $ν_4$, and $ν_6$ vibrational states. Of the \nbNonRedTr\ non-redundant transitions processed, which come from \nbSr\ sources including the present work, \nbValTr\ could be validated, providing \nbEl\ empirical energy levels of \spec{h212c16o}\ with statistically well-defined uncertainties. All the empirical rotational-vibrational energy levels determined are used to improve the accuracy of ExoMol's AYTY line list for hot formaldehyde. The complete list of collated experimental transitions, the empirical energy levels determined, as well as the extended and improved line list are provided as Supplementary Material.

astro-ph.SR↗

Methanimine as a key precursor of imines in the interstellar medium: the case of propargylimine

A gas-phase formation route is proposed for the recently detected propargylimine molecule. In analogy to other imines, such as cyanomethanimine, the addition of a reactive radical (C$_2$H in the present case) to methanimine (CH$_2$NH}) leads to reaction channels open also in the harsh conditions of the interstellar medium. Three possible isomers can be formed in the C$H_2$NH + C$_2$H reaction: Z- and E-propargylimine (Z-,E-PGIM) as well as N-ethynyl-methanimine (N-EMIM). For both PGIM species, the computed global rate coefficient is nearly constant in the 20-300 K temperature range, and of the order of 2-3 $\times$ 10$^{-10}$ cm$^3$ molecule$^{-1}$ s$^{-1}$, while that for N-EMIM is about two orders of magnitude smaller. Assuming equal destruction rates for the two isomers, these results imply an abundance ratio for PGIM of [Z]/[E] $\sim$ 1.5, which is only slightly underestimated with respect to the observational datum.

astro-ph.GA↗

The Role of State-of-the-Art Quantum-Chemical Calculations in Astrochemistry: Formation Route and Spectroscopy of Ethanimine as a Paradigmatic Case

The gas-phase formation and spectroscopic characteristics of ethanimine have been re-investigated as a paradigmatic case illustrating the accuracy of state-of-the-art quantum-chemical (QC) methodologies in the field of astrochemistry. According to our computations, the reaction between the amidogen, NH, and ethyl, C$_2$H$_5$, radicals is very fast, close to the gas-kinetics limit. Although the main reaction channel under conditions typical of the interstellar medium leads to methanimine and the methyl radical, the predicted amount of the two E,Z stereoisomers of ethanimine is around 10%. State-of-the-art QC and kinetic models lead to a [E-CH$_3$CHNH]/[Z-CH$_3$CHNH] ratio of ca. 1.4, slightly higher than the previous computations, but still far from the value determined from astronomical observations (ca. 3). An accurate computational characterization of the molecular structure, energetics, and spectroscopic properties of the E and Z isomers of ethanimine combined with millimeter-wave measurements up to 300 GHz, allows for predicting the rotational spectrum of both isomers up to 500 GHz, thus opening the way toward new astronomical observations.

astro-ph.GA↗

State-of-the-Art Quantum Chemistry Meets Variable Reaction Coordinate Transition State Theory to Solve the Puzzling Case of the H2S + Cl System

The atmospheric reaction of H$_2$S with Cl has been reinvestigated to check if, as previously suggested, only explicit dynamical computations can lead to an accurate evaluation of the reaction rate because of strong recrossing effects and the breakdown of the variational extension of transition state theory. For this reason, the corresponding potential energy surface has been thoroughly investigated, thus leading to an accurate characterization of all stationary points, whose energetics has been computed at the state of the art. To this end, coupled-cluster theory including up to quadruple excitations has been employed, together with the extrapolation to the complete basis set limit and also incorporating core-valence correlation, spin-orbit, and scalar relativistic effects as well as diagonal Born-Oppenheimer corrections. This highly accurate composite scheme has also been paralleled by less expensive yet promising computational approaches. Moving to kinetics, variational transition state theory and its variable reaction coordinate extension for barrierless steps have been exploited, thus obtaining a reaction rate constant (8.16 x 10$^{-11}$ cm$^3$ molecule$^{-1}$ s$^{-1}$ at 300 K and 1 atm) in remarkable agreement with the experimental counterpart. Therefore, contrary to previous claims, there is no need to invoke any failure of the transition state theory, provided that sufficiently accurate quantum-chemical computations are performed. The investigation of the puzzling case of the H$_2$S + Cl system allowed us to present a robust approach for disclosing the thermochemistry and kinetics of reactions of atmospheric and astrophysical interest.

physics.chem-ph↗

A Systematic Study on the Absorption Features of Interstellar Ices in Presence of Impurities

Spectroscopic studies play a key role in the identification and analysis of interstellar ices and their structure. Some molecules have been identified within the interstellar ices either as pure, mixed, or even as layered structures. Absorption band features of water ice can significantly change with the presence of different types of impurities (CO, CO2, CH3OH, H2CO, etc.). In this work, we carried out a theoretical investigation to understand the behavior of water band frequency, and strength in the presence of impurities. The computational study has been supported and complemented by some infrared spectroscopy experiments aimed at verifying the effect of HCOOH, NH3 , and CH3 OH on the band profiles of pure H2O ice. Specifically, we explored the effect on the band strength of libration, bending, bulk stretching, and free-OH stretching modes. Computed band strength profiles have been compared with our new and existing experimental results, thus pointing out that vibrational modes of H2O and their intensities can change considerably in the presence of impurities at different concentrations. In most cases, the bulk stretching mode is the most affected vibration, while the bending is the least affected mode. HCOOH was found to have a strong influence on the libration, bending, and bulk stretching band profiles. In the case of NH3, the free-OH stretching band disappears when the impurity concentration becomes 50%. This work will ultimately aid a correct interpretation of future detailed spaceborne observations of interstellar ices by means of the upcoming JWST mission.

astro-ph.GA↗

The genealogical tree of ethanol: gas-phase formation of glycolaldehyde, acetic acid and formic acid

Despite the harsh conditions of the interstellar medium, chemistry thrives in it, especially in star forming regions where several interstellar complex organic molecules (iCOMs) have been detected. Yet, how these species are synthesised is a mystery. The majority of current models claim that this happens on interstellar grain surfaces. Nevertheless, evidence is mounting that neutral gas-phase chemistry plays an important role. In this article, we propose a new scheme for the gas-phase synthesis of glycolaldehyde, a species with a prebiotic potential and for which no gas-phase formation route was previously known. In the proposed scheme, the ancestor is ethanol and the glycolaldehyde sister species are acetic acid (another iCOM with unknown gas-phase formation routes) and formic acid. For the reactions of the new scheme with no available data, we have performed electronic structure and kinetics calculations deriving rate coefficients and branching ratios. Furthermore, after a careful review of the chemistry literature, we revised the available chemical networks, adding and correcting several reactions related to glycolaldehyde, acetic acid and formic acid. The new chemical network has been used in an astrochemical model to predict the abundance of glycolaldehyde, acetic acid and formic acid. The predicted abundance of glycolaldehyde depends on the ethanol abundance in the gas phase and is in excellent agreement with the measured one in hot corinos and shock sites. Our new model overpredicts the abundance of acetic acid and formic acid by about a factor of ten, which might imply a yet incomplete reaction network.

astro-ph.SR↗

Laboratory measurements and astronomical search for cyanomethanimine

C-cyanomethanimine (HNCHCN), existing in the two $Z$ and $E$ isomeric forms, is a key prebiotic molecule, but, so far, only the $E$ isomer has been detected toward the massive star-forming region. Sagittarius B2(N) using transitions in the radio wavelength domain. With the aim of detecting HNCHCN in Sun-like-star forming regions, the laboratory investigation of its rotational spectrum has been extended to the millimeter-/submillimeter-wave (mm-/submm-) spectral window in which several unbiased spectral surveys have been already carried out. High-resolution laboratory measurements of the rotational spectrum of C-cyanomethanimine were carried out in the 100-420 GHz range using a frequency-modulation absorption spectrometer. We then searched for the C-cyanomethanimine spectral features in the mm-wave range using the high-sensitivity and unbiased spectral surveys obtained with the IRAM 30-m antenna in the ASAI context, the earliest stages of star formation from starless to evolved Class I objects being sampled. For both the $Z$ and $E$ isomers, the spectroscopic work has led to an improved and extended knowledge of the spectroscopic parameters, thus providing accurate predictions of the rotational signatures up to $\sim$700 GHz. So far, no C-cyanomethanimine emission has been detected toward the ASAI targets, and upper limits of the column density of $\sim$ 10$^{11}$--10$^{12}$ cm$^{-2}$ could only be derived. Consequently, the C-cyanomethanimine abundances have to be less than a few 10$^{-10}$ for starless and hot-corinos. A less stringent constraint, $\leq$ 10$^{-9}$, is obtained for shocks sites. The combination of the upper limits of the abundances of C-cyanomethanimine together with accurate laboratory frequencies up to $\sim$ 700 GHz poses the basis for future higher sensitivity searches around Sun-like-star forming regions.

astro-ph.GA↗

Theory of Gas Phase Scattering and Reactivity for Astrochemistry

Because of the very peculiar conditions of chemistry in many astrophysical gases (low densities, mostly low temperatures, kinetics-dominated chemical evolution), great efforts have been devoted to study molecular signatures and chemical evolution. While experiments are being performed in many laboratories, it appears that the efforts directed towards theoretical works are not as strong. This report deals with the present status of chemical physics/physical chemistry theory, for the qualitative and quantitative understanding of kinetics of molecular scattering, being it reactive or inelastic. By gathering several types of expertise, from applied mathematics to physical chemistry, dialog is made possible, as a step towards new and more adapted theoretical frameworks, capable of meeting the theoretical, methodological and numerical challenges of kinetics-dominated gas phase chemistry in astrophysical environments. A state of the art panorama is presented, alongside present-day strengths and shortcomings. However, coverage is not complete, being limited in this report to actual attendance of the workshop. Some paths towards relevant progress are proposed.

astro-ph.IM↗

Rare isotopic species of sulphur monoxide: the rotational spectrum in the THz region

Many sulphur-bearing species have been detected in different astronomical environments and have allowed to derive important information about the chemical and physical composition of interstellar regions. In particular, these species have also been showed to trace and probe hot-core environment time evolution. Among the most prominent sulphur-bearing molecules, SO, sulphur monoxide radical, is one of the more ubiquitous and abundant, observed also in its isotopic substituted species such as $^{34}$SO and S$^{18}$O. Due to the importance of this simple diatomic system and to face the challenge of modern radioastronomical facilities, an extension to THz range of the rare isotopologues of sulphur monoxide has been performed. High-resolution rotational molecular spectroscopy has been employed to extend the available dataset of four isotopic species, SO, $^{34}$SO, S$^{17}$O, and S$^{18}$O up to the 1.5 THz region. The frequency coverage and the spectral resolution of our measurements allowed a better constraint of the molecular constants of the four species considered, focusing especially for the two oxygen substituted isotopologues. Our measurements were also employed in an isotopically invariant fit including all available pure rotational and ro-vibrational transitions for all SO isotopologues, thus enabling accurate predictions for rotational transitions at higher frequencies. Comparison with recent works performed on the same system are also provided, showing the quality of our experiment and the improvement of the datasets for all the species here considered. Transition frequencies for this system can now be used with confidence by the astronomical community well into the THz spectral region.

astro-ph.EP↗