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Cyril R. Pernet

Publications and source records attributed to Cyril R. Pernet.

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Assessing metadata privacy in neuroimaging

The ethical and legal imperative to share research data without causing harm requires careful attention to privacy risks. While mounting evidence demonstrates that data sharing benefits science, legitimate concerns persist regarding the potential leakage of personal information that could lead to reidentification and subsequent harm. We reviewed metadata accompanying neuroimaging datasets from heterogeneous studies openly available on OpenNeuro, involving participants across the lifespan, from children to older adults, with and without clinical diagnoses, and including associated clinical score data. Using metaprivBIDS (https://github.com/CPernet/metaprivBIDS), a software application for BIDS compliant tsv/json files that computes and reports different privacy metrics (k-anonymity, k-global, l-diversity, SUDA, PIF), we found that privacy is generally well maintained, with serious vulnerabilities being rare. Nonetheless, issues were identified in nearly all datasets and warrant mitigation. Notably, clinical score data (e.g., neuropsychological results) posed minimal reidentification risk, whereas demographic variables: age, sex assigned at birth, sexual orientations, race, income, and geolocation, represented the principal privacy vulnerabilities. We outline practical measures to address these risks, enabling safer data sharing practices.

q-bio.OT

The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)

The Brain Imaging Data Structure (BIDS) is a community-driven standard for the organization of data and metadata from a growing range of neuroscience modalities. This paper is meant as a history of how the standard has developed and grown over time. We outline the principles behind the project, the mechanisms by which it has been extended, and some of the challenges being addressed as it evolves. We also discuss the lessons learned through the project, with the aim of enabling researchers in other domains to learn from the success of BIDS.

q-bio.OT