arXiv subjects

D. D. Johnson

Publications and source records attributed to D. D. Johnson.

25 records · Page 2Linked to original sources

arXiv2011

Efficient Isoparametric Integration over Arbitrary, Space-Filling Voronoi Polyhedra for Electronic-Structure Calculations

A numerically efficient, accurate, and easily implemented integration scheme over convex Voronoi polyhedra (VP) is presented for use in {\it ab-initio} electronic-structure calculations. We combine a weighted Voronoi tessellation with isoparametric integration via Gauss-Legendre quadratures to provide rapidly convergent VP integrals for a variety of integrands, including those with a Coulomb singularity. We showcase the capability of our approach by first applying to an analytic charge-density model achieving machine-precision accuracy with expected convergence properties in milliseconds. For contrast, we compare our results to those using shape-functions and show our approach is greater than $10^{5}$ faster and $10^{7}$ more accurate. A weighted Voronoi tessellation also allows for a physics-based partitioning of space that guarantees convex, space-filling VP while reflecting accurate atomic size and site charges, as we show within KKR methods applied to Fe-Pd alloys.

cond-mat.mtrl-sci↗

arXiv2005

Sub-structural Niching in Estimation of Distribution Algorithms

We propose a sub-structural niching method that fully exploits the problem decomposition capability of linkage-learning methods such as the estimation of distribution algorithms and concentrate on maintaining diversity at the sub-structural level. The proposed method consists of three key components: (1) Problem decomposition and sub-structure identification, (2) sub-structure fitness estimation, and (3) sub-structural niche preservation. The sub-structural niching method is compared to restricted tournament selection (RTS)--a niching method used in hierarchical Bayesian optimization algorithm--with special emphasis on sustained preservation of multiple global solutions of a class of boundedly-difficult, additively-separable multimodal problems. The results show that sub-structural niching successfully maintains multiple global optima over large number of generations and does so with significantly less population than RTS. Additionally, the market share of each of the niche is much closer to the expected level in sub-structural niching when compared to RTS.

cs.NE↗

arXiv2004

Genetic Programming for Multi-Timescale Modeling

A bottleneck for multi-timescale dynamics is the computation of the potential energy surface (PES). We explore the use of genetic programming (GP) to symbolically regress a mapping of the saddle-point barriers from only a few calculated points via molecular dynamics, thereby avoiding explicit calculation of all the barriers. The GP-regressed barrier function enables use of kinetic Monte Carlo (KMC) to simulate real-time kinetics (seconds to hours) using realistic interactions. To illustrate, we apply a GP regression to vacancy-assisted migration on a surface of a binary alloy and predict the diffusion barriers within 0.1--1% error using 3% (or less) of the barriers, and discuss the significant reduction in CPU time.

cond-mat.mtrl-sci↗

arXiv2004

Reliable First-Principles Alloy Thermodynamics via Truncated Cluster Expansions

In alloys cluster expansions (CE) are increasingly used to combine first-principles electronic-structure and Monte Carlo methods to predict thermodynamic properties. As a basis-set expansion in terms of lattice geometrical clusters and effective cluster interactions, the CE is exact if infinite, but is tractable only if truncated. Yet until now a truncation procedure was not well-defined and did not guarantee a reliable truncated CE. We present an optimal truncation procedure for CE basis sets that provides reliable thermodynamics. We then exemplify its importance in Ni$_3$V, where the CE has failed unpredictably, and now show agreement to a range of measured values, predict new low-energy structures, and explain the cause of previous failures.

cond-mat.mtrl-sci↗

arXiv2004

Importance of Thermal Disorder on the Properties of Alloys: Origin of Paramagnetism and Structural Anomalies in Iron-Aluminum

The bcc-based Fe_{1-x}Al_{x} exhibit interesting magnetic and anomalous structural properties as a function of composition and sample processing conditions arising from thermal or off-stoichiometric chemical disorder, and, although well studied, these properties are not understood. In stoichiometric B2 FeAl, including the effects of partial long-range order (i.e., thermal antisites), we find the observed paramagnetic response (with non-zero local moments), in contrast to past investigations which find ferromagnetism based on local density approximation (LDA) to density functional theory or which find a non-magnetic state from LDA+U, both of which are inconsistent with experiment. Moreover, from this magneto-chemical coupling, we are able to determine the origins of the lattice constant anomalies found in Fe_{1-x}Al_{x} for x=25-50, as observed from various processing conditions.

cond-mat.mtrl-sci↗

arXiv2000

Spin fluctuations in nearly magnetic metals from ab-initio dynamical spin susceptibility calculations:application to Pd and Cr95V5

We describe our theoretical formalism and computational scheme for making ab-initio calculations of the dynamic paramagnetic spin susceptibilities of metals and alloys at finite temperatures. Its basis is Time-Dependent Density Functional Theory within an electronic multiple scattering, imaginary time Green function formalism. Results receive a natural interpretation in terms of overdamped oscillator systems making them suitable for incorporation into spin fluctuation theories. For illustration we apply our method to the nearly ferromagnetic metal Pd and the nearly antiferromagnetic chromium alloy Cr95V5. We compare and contrast the spin dynamics of these two metals and in each case identify those fluctuations with relaxation times much longer than typical electronic `hopping times'

cond-mat.str-el↗

arXiv2000

Incommensurate and Commensurate Antiferromagnetic Spin Fluctuations in Cr and Cr Alloys from Ab Initio Dynamical Spin Susceptibility Calculations

A scheme for making ab-initio calculations of the dynamic paramagnetic spin susceptibilities of solids at finite temperatures is described. It is based on Time-Dependent Density Functional Theory and employs an electronic multiple scattering formalism. Incommensurate and commensurate anti-ferromagnetic spin fluctuations in paramagnetic Cr and compositionally disordered Cr95V5 and Cr95Re5 alloys are studied together with the connection with the nesting of their Fermi surfaces. We find that the spin fluctuations can be described rather simply in terms of an overdamped oscillator model. Good agreement with inelastic neutron scattering data is obtained.

cond-mat.str-el↗