arXiv subjects

D. Marenduzzo

Publications and source records attributed to D. Marenduzzo.

At least 73 records · Page 4Linked to original sources

arXiv2011

Bistable defect structures in blue phase devices

Blue phases (BPs) are liquid crystals made up by networks of defects, or disclination lines. While existing phase diagrams show a striking variety of competing metastable topologies for these networks, very little is known as to how to kinetically reach a target structure, or how to switch from one to the other, which is of paramount importance for devices. We theoretically identify two confined blue phase I systems in which by applying an appropriate series of electric field it is possible to select one of two bistable defect patterns. Our results may be used to realise new generation and fast switching energy-saving bistable devices in ultrathin surface treated BPI wafers.

cond-mat.soft↗

arXiv2011

Switching dynamics in cholesteric blue phases

Blue phases are networks of disclination lines, which occur in cholesteric liquid crystals near the transition to the isotropic phase. They have recently been used for the new generation of fast switching liquid crystal displays. Here we study numerically the steady states and switching hydrodynamics of blue phase I (BPI) and blue phase II (BPII) cells subjected to an electric field. When the field is on, there are three regimes: for very weak fields (and strong anchoring at the boundaries) the blue phases are almost unaffected, for intermediate fields the disclinations twist (for BPI) and unzip (for BPII), whereas for very large voltages the network dissolves in the bulk of the cell. Interestingly, we find that a BPII cell can recover its original structure when the field is switched off, whereas a BPI cell is found to be trapped more easily into metastable configurations. The kinetic pathways followed during switching on and off entails dramatic reorganisation of the disclination networks. We also discuss the effect of changing the director field anchoring at the boundary planes and of varying the direction of the applied field.

cond-mat.soft↗

arXiv2011

Colloids in liquid crystals: a lattice Boltzmann study

We propose a hybrid lattice Boltzmann algorithm to simulate the hydrodynamics of colloidal particles inside a liquid crystalline host. To validate our algorithm, we study the static and the microrheology of a colloid in a nematic, with tangential anchoring of the director field at the particle surface, and we confirm theories and experiments showing that the drag force in a nematic is markedly anisotropic. We then apply our method to consider the case of a colloid inside a cholesteric, and with normal anchoring at the surface. We show that by tuning the ratio between particle size and cholesteric pitch it is possible to control the defect configuration around the particle, and to stabilise novel figure-of-eight or highly twisted loops close to the colloid surface.

cond-mat.soft↗

arXiv2011

Switching and defect dynamics in multistable liquid crystal devices

We investigate the switching dynamics of multistable nematic liquid crystal devices. In particular we identify a remarkably simple 2-dimensional (2D) device which exploits hybrid alignment at the surfaces to yield a bistable response. We also consider a 3-dimensional (3D) tristable nematic device with patterned anchoring, recently implemented in practice, and discuss how the director and disclination patterns change during switching.

cond-mat.soft↗

arXiv2011

Colloids in Cholesterics: Size-Dependent Defects and Non-Stokesian Microrheology

We simulate a colloidal particle (radius R) in a cholesteric liquid crystal (pitch p) with tangential order parameter alignment at the particle surface. The local defect structure evolves from a dipolar pair of surface defects (boojums) at small R/p to a pair of twisted disclination lines wrapping around the particle at larger values. On dragging the colloid with small velocity v through the medium along the cholesteric helix axis (an active microrheology measurement), we find a hydrodynamic drag force that scales linearly with v but superlinearly with R-in striking violation of Stokes' law, as generally used to interpret such measurements.

cond-mat.soft↗

arXiv2010

Nonlinear dynamics and rheology of active fluids: simulations in two dimensions

We report simulations of a continuum model for (apolar, flow aligning) active fluids in two dimensions. Both free and anchored boundary conditions are considered, at parallel confining walls that are either static or moving at fixed relative velocity. We focus on extensile materials and find that steady shear bands, previously shown to arise ubiquitously in 1D for the active nematic phase at small (or indeed zero) shear rate, are generally replaced in 2D by more complex flow patterns that can be stationary, oscillatory, or apparently chaotic. The consequences of these flow patterns for time-averaged steady-state rheology are examined.

cond-mat.soft↗

arXiv2010

Lattice Boltzmann simulations of liquid crystalline fluids: active gels and blue phases

Lattice Boltzmann simulations have become a method of choice to solve the hydrodynamic equations of motion of a number of complex fluids. Here we review some recent applications of lattice Boltzmann to study the hydrodynamics of liquid crystalline materials. In particular, we focus on the study of (a) the exotic blue phases of cholesteric liquid crystals, and (b) active gels - a model system for actin plus myosin solutions or bacterial suspensions. In both cases lattice Boltzmann studies have proved useful to provide new insights into these complex materials.

cond-mat.soft↗

arXiv2010

Ordering dynamics of blue phases entails kinetic stabilization of amorphous networks

The cubic blue phases of liquid crystals are fascinating and technologically promising examples of hierarchically structured soft materials, comprising ordered networks of defect lines (disclinations) within a liquid crystalline matrix. We present the first large-scale simulations of their domain growth, starting from a blue phase nucleus within a supercooled isotropic or cholesteric background. The nucleated phase is thermodynamically stable; one expects its slow orderly growth, creating a bulk cubic. Instead, we find that the strong propensity to form disclinations drives the rapid disorderly growth of a metastable amorphous defect network. During this process the original nucleus is destroyed; re-emergence of the stable phase may therefore require a second nucleation step. Our findings suggest that blue phases exhibit hierarchical behavior in their ordering dynamics, to match that in their structure.

cond-mat.soft↗

arXiv2010

The role of noise and advection in absorbing state phase transitions

We study the effect of advection and noise on the field theory for directed percolation (DP). We show that even a very small advective velocity is enough to change the universality class of the dynamic phase transition. When the noise is taken to be proportional to the square root of the population density, we find an additional nonequilibrium 'spinodal' line separating a region where an exponentially decreasing density is metastable, from another one in which it is unstable. If the noise is instead linear in the density, the phase diagram changes dramatically both quantitatively and qualitatively, and the spinodal line becomes a true phase boundary. We briefly discuss possible applications of our results to microbial sedimentation and population dynamics in rivers.

cond-mat.stat-mech↗

arXiv2010

Non-equilibrium dynamics of an active colloidal "chucker"

We report Monte Carlo simulations of the dynamics of a "chucker": a colloidal particle which emits smaller solute particles from its surface, isotropically and at a constant rate k_c. We find that the diffusion constant of the chucker increases for small k_c, as recently predicted theoretically. At large k_c the chucker diffuses more slowly due to crowding effects. We compare our simulation results to those of a "point particle" Langevin dynamics scheme in which the solute concentration field is calculated analytically, and in which hydrodynamic effects can be included albeit in an approximate way. By simulating the dragging of a chucker, we obtain an estimate of its apparent mobility coefficient which violates the fluctuation-dissipation theorem. We also characterise the probability density profile for a chucker which sediments onto a surface which either repels or absorbs the solute particles, and find that the steady state distributions are very different in the two cases. Our simulations are inspired by the biological example of exopolysaccharide-producing bacteria, as well as by recent experimental, simulation and theoretical work on phoretic colloidal "swimmers".

cond-mat.soft↗

arXiv2010

Thermodynamics of Blue Phases In Electric Fields

We present extensive numerical studies to determine the phase diagrams of cubic and hexagonal blue phases in an electric field. We confirm the earlier prediction that hexagonal phases, both 2 and 3 dimensional, are stabilized by a field, but we significantly refine the phase boundaries, which were previously estimated by means of a semi-analytical approximation. In particular, our simulations show that the blue phase I -- blue phase II transition at fixed chirality is largely unaffected by electric field, as observed experimentally.

cond-mat.soft↗

arXiv2010

Arrested phase separation in reproducing bacteria: a generic route to pattern formation?

We present a generic mechanism by which reproducing microorganisms, with a diffusivity that depends on the local population density, can form stable patterns. It is known that a decrease of swimming speed with density can promote separation into bulk phases of two coexisting densities; this is opposed by the logistic law for birth and death which allows only a single uniform density to be stable. The result of this contest is an arrested nonequilibrium phase separation in which dense droplets or rings become separated by less dense regions, with a characteristic steady-state length scale. Cell division mainly occurs in the dilute regions and cell death in the dense ones, with a continuous flux between these sustained by the diffusivity gradient. We formulate a mathematical model of this in a case involving run-and-tumble bacteria, and make connections with a wider class of mechanisms for density-dependent motility. No chemotaxis is assumed in the model, yet it predicts the formation of patterns strikingly similar to those believed to result from chemotactic behavior.

q-bio.PE↗

arXiv2009

Domain growth in cholesteric blue phases: hybrid lattice Boltzmann simulations

Here we review a hybrid lattice Boltzmann algorithm to solve the equations of motion of cholesteric liquid crystals. The method consists in coupling a lattice Boltzmann solver for the Navier-Stokes equation to a finite difference method to solve the dynamical equations governing the evolution of the liquid crystalline order parameter. We apply this method to study the growth of cholesteric blue phase domains, within a cholesteric phase. We focus on the growth of blue phase II and on a thin slab geometry in which the domain wall is flat. Our results show that, depending on the chirality, the growing blue phase is either BPII with no or few defects, or another structure with hexagonal ordering. We hope that our simulations will spur further experimental investigations on quenches in micron-size blue phase samples. The computational size that our hybrid lattice Boltzmann scheme can handle suggest that large scale simulations of new generation of blue phase liquid crystal device are within reach.

cond-mat.soft↗

arXiv2008

Melting a stretched DNA

We study the melting of a double stranded DNA in the presence of stretching forces, via 3D Monte-Carlo simulations, exactly solvable models and heuristic arguments. The resulting force-temperature phase diagram is dramatically different for the cases where the force is applied to only one strand or to both. Different assumptions on the monomer size of single and double stranded DNA lead to opposite conclusions as to whether DNA melts or not as it overstretches.

cond-mat.soft↗

arXiv2008

Nonequilibrium phase transition in the sedimentation of reproducing particles

We study numerically and analytically the dynamics of a sedimenting suspension of active, reproducing particles, such as growing bacteria in a gravitational field. In steady state we find a non-equilibrium phase transition between a `sedimentation' regime, analogous to the sedimentation equilibrium of passive colloids, and a `uniform' regime, in which the particle density is constant in all but the top and bottom of the sample. We discuss the importance of fluctuations in particle density in locating the phase transition point, and report the kinetics of sedimentation at early times.

cond-mat.stat-mech↗

arXiv2008

Shearing active gels close to the isotropic-nematic transition

We study numerically the rheological properties of a slab of active gel close o the isotropic-nematic transition. The flow behavior shows strong dependence on sample size, boundary conditions, and on the bulk constitutive curve, which, on entering the nematic phase, acquires an activity-induced discontinuity at the origin. The precursor of this within the metastable isotropic phase for contractile systems ({\em e.g.,} actomyosin gels) gives a viscosity divergence; its counterpart for extensile ({\em e.g.,} {\em B. subtilis}) suspensions admits instead a shear-banded flow with zero apparent viscosity.

cond-mat.soft↗

arXiv2007

Steady-state hydrodynamic instabilities of active liquid crystals: Hybrid lattice Boltzmann simulations

We report hybrid lattice Boltzmann (HLB) simulations of the hydrodynamics of an active nematic liquid crystal sandwiched between confining walls with various anchoring conditions. We confirm the existence of a transition between a passive phase and an active phase, in which there is spontaneous flow in the steady state. This transition is attained for sufficiently ``extensile'' rods, in the case of flow-aligning liquid crystals, and for sufficiently ``contractile'' ones for flow-tumbling materials. In a quasi-1D geometry, deep in the active phase of flow-aligning materials, our simulations give evidence of hysteresis and history-dependent steady states, as well as of spontaneous banded flow. Flow-tumbling materials, in contrast, re-arrange themselves so that only the two boundary layers flow in steady state. Two-dimensional simulations, with periodic boundary conditions, show additional instabilities, with the spontaneous flow appearing as patterns made up of ``convection rolls''. These results demonstrate a remarkable richness (including dependence on anchoring conditions) in the steady-state phase behaviour of active materials, even in the absence of external forcing; they have no counterpart for passive nematics. Our HLB methodology, which combines lattice Boltzmann for momentum transport with a finite difference scheme for the order parameter dynamics, offers a robust and efficient method for probing the complex hydrodynamic behaviour of active nematics.

cond-mat.soft↗

arXiv2007

Lattice Boltzmann simulations of spontaneous flow in active liquid crystals: the role of boundary conditions

Active liquid crystals or active gels are soft materials which can be physically realised e.g. by preparing a solution of cytoskeletal filaments interacting with molecular motors. We study the hydrodynamics of an active liquid crystal in a slab-like geometry with various boundary conditions, by solving numerically its equations of motion via lattice Boltzmann simulations. In all cases we find that active liquid crystals can sustain spontaneous flow in steady state contrarily to their passive counterparts, and in agreement with recent theoretical predictions. We further find that conflicting anchoring conditions at the boundaries lead to spontaneous flow for any value of the 'activity' parameter, while with unfrustrated anchoring at all boundaries spontaneous flow only occurs when the activity exceeds a critical threshold. We finally discuss the dynamic pathway leading to steady state in a few selected cases.

cond-mat.soft↗