arXiv subjects

D. Mukamel

Publications and source records attributed to D. Mukamel.

At least 19 recordsLinked to original sources

arXiv2018

Width scaling of an interface constrained by a membrane

We investigate the shape of a growing interface in the presence of an impenetrable moving membrane. The two distinct geometrical arrangements of the interface and membrane, obtained by placing the membrane behind or ahead of the interface, are not symmetrically related. On the basis of numerical results and an exact calculation, we argue that these two arrangements represent two distinct universality classes for interfacial growth: whilst the well-established Kardar-Parisi-Zhang (KPZ) growth is obtained in the `ahead' arrangement, we find an arrested KPZ growth with a smaller roughness exponent in the `behind' arrangement. This suggests that the surface properties of growing cell membranes and expanding bacterial colonies, for example, are fundamentally distinct.

cond-mat.stat-mech↗

arXiv2018

Driven tracer with absolute negative mobility

Instances of negative mobility, where a system responds to a perturbation in a way opposite to naive expectation, have been studied theoretically and experimentally in numerous nonequilibrium systems. In this work we show that Absolute Negative Mobility (ANM), whereby current is produced in a direction opposite to the drive, can occur around equilibrium states. This is demonstrated with a simple one-dimensional lattice model with a driven tracer. We derive analytical predictions in the linear response regime and elucidate the mechanism leading to ANM by studying the high-density limit. We also study numerically a model of hard Brownian disks in a narrow planar channel, for which the lattice model can be viewed as a toy model. We find that the model exhibits Negative Differential Mobility (NDM), but no ANM.

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arXiv2017

Temperature profile and boundary conditions in an anomalous heat transport model

A framework for studying the effect of the coupling to the heat bath in models exhibiting anomalous heat conduction is described. The framework is applied to the harmonic chain with momentum exchange model where the non-trivial temperature profile is calculated. In this approach one first uses the hydrodynamic (HD) equations to calculate the equilibrium current-current correlation function in large but finite chains, explicitly taking into account the BCs resulting from the coupling to the heat reservoirs. Making use of a linear response relation, the anomalous conductivity exponent $α$ and an integral equation for the temperature profile are obtained. The temperature profile is found to be singular at the boundaries with an exponent which varies continuously with the coupling to the heat reservoirs expressed by the BCs. In addition, the relation between the harmonic chain and a system of noninteracting L{é}vy walkers is made explicit, where different BCs of the chain correspond to different reflection coefficients of the L{é}vy particles.

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arXiv2016

Driven tracers in narrow channels

Steady state properties of a driven tracer moving in a narrow two dimensional (2D) channel of quiescent medium are studied. The tracer drives the system out of equilibrium, perturbs the density and pressure fields, and gives the bath particles a nonzero average velocity, creating a current in the channel. Three models in which the confining effect of the channel is probed are analyzed and compared in this study: the first is the simple symmetric exclusion process (SSEP), for which the stationary density profile and the pressure on the walls in the frame of the tracer are computed. We show that the tracer acts like a dipolar source in an average velocity field. The spatial structure of this 2D strip is then simplified to a one dimensional SSEP, in which exchanges of position between the tracer and the bath particles are allowed. Using a combination of mean field theory and exact solution in the limit where no exchange is allowed, gives good predictions of the velocity of the tracer and the density field. Finally, we show that results obtained for the 1D SSEP with exchanges also apply to a gas of overdamped hard disks in a narrow channel. The correspondence between the parameters of the SSEP and of the gas of hard disks is systematic and follows from simple intuitive arguments. Our analytical results are checked numerically.

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arXiv2016

Correlation and fluctuation in Random Average Process on an infinite line with a driven tracer

We study the effect of single biased tracer particle in a bath of other particles performing the random average process (RAP) on an infinite line. We focus on the large time behavior of the mean and the fluctuations of the positions of the particles and also the correlations among them. In the large time t limit these quantities have well-defined scaling forms and grow with time as $\sqrt{t}$. A differential equation for the scaling function associated with the correlation function is obtained and solved perturbatively around the solution for a symmetric tracer. Interestingly, when the tracer is totally asymmetric, further progress is enabled by the fact that the particles behind of the tracer do not affect the motion of the particles in front of it, which leads in particular to an exact expression for the variance of the position of the tracer. Finally, the variance and correlations of the gaps between successive particles are also studied. Numerical simulations support our analytical results.

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arXiv2010

Long-range correlations and ensemble inequivalence in a generalized ABC model

A generalization of the ABC model, a one-dimensional model of a driven system of three particle species with local dynamics, is introduced, in which the model evolves under either (i) density-conserving or (ii) nonconserving dynamics. For equal average densities of the three species, both dynamical models are demonstrated to exhibit detailed balance with respect to a Hamiltonian with long-range interactions. The model is found to exhibit two distinct phase diagrams, corresponding to the canonical (density-conserving) and grand canonical (density nonconserving) ensembles, as expected in long-range interacting systems. The implication of this result to nonequilibrium steady states, such as those of the ABC model with unequal average densities, are briefly discussed.

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arXiv2010

Phase diagram of the ABC model with nonconserving processes

The three species ABC model of driven particles on a ring is generalized to include vacancies and particle-nonconserving processes. The model exhibits phase separation at high densities. For equal average densities of the three species, it is shown that although the dynamics is {\it local}, it obeys detailed balance with respect to a Hamiltonian with {\it long-range interactions}, yielding a nonadditive free energy. The phase diagrams of the conserving and nonconserving models, corresponding to the canonical and grand-canonical ensembles, respectively, are calculated in the thermodynamic limit. Both models exhibit a transition from a homogeneous to a phase-separated state, although the phase diagrams are shown to differ from each other. This conforms with the expected inequivalence of ensembles in equilibrium systems with long-range interactions. These results are based on a stability analysis of the homogeneous phase and exact solution of the hydrodynamic equations of the models. They are supported by Monte-Carlo simulations. This study may serve as a useful starting point for analyzing the phase diagram for unequal densities, where detailed balance is not satisfied and thus a Hamiltonian cannot be defined.

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arXiv2009

Phase diagram of the ABC model on an interval

The three species asymmetric ABC model was initially defined on a ring by Evans, Kafri, Koduvely, and Mukamel, and the weakly asymmetric version was later studied by Clincy, Derrida, and Evans. Here the latter model is studied on a one-dimensional lattice of N sites with closed (zero flux) boundaries. In this geometry the local particle conserving dynamics satisfies detailed balance with respect to a canonical Gibbs measure with long range asymmetric pair interactions. This generalizes results for the ring case, where detailed balance holds, and in fact the steady state measure is known only for the case of equal densities of the different species: in the latter case the stationary states of the system on a ring and on an interval are the same. We prove that in the N to infinity limit the scaled density profiles are given by (pieces of) the periodic trajectory of a particle moving in a quartic confining potential. We further prove uniqueness of the profiles, i.e., the existence of a single phase, in all regions of the parameter space (of average densities and temperature) except at low temperature with all densities equal; in this case a continuum of phases, differing by translation, coexist. The results for the equal density case apply also to the system on the ring, and there extend results of Clincy et al.

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arXiv2009

Supercoil formation in DNA denaturation

We generalize the Poland-Scheraga (PS) model to the case of a circular DNA, taking into account the twisting of the two strains around each other. Guided by recent single-molecule experiments on DNA strands, we assume that the torsional stress induced by denaturation enforces formation of supercoils whose writhe absorbs the linking number expelled by the loops. Our model predicts that, when the entropy parameter of a loop satisfies $c \le 2$, denaturation transition does not take place. On the other hand for $c>2$ a first-order denaturation transition is consistent with our model and may take place in the actual system, as in the case with no supercoils. These results are in contrast with other treatments of circular DNA melting where denaturation is assumed to be accompanied by an increase in twist rather than writhe on the bound segments.

cond-mat.soft↗

arXiv2008

Soft disks in a narrow channel

The pressure components of "soft" disks in a two dimensional narrow channel are analyzed in the dilute gas regime using the Mayer cluster expansion and molecular dynamics. Channels with either periodic or reflecting boundaries are considered. It is found that when the two-body potential, u(r), is singular at some distance r_0, the dependence of the pressure components on the channel width exhibits a singularity at one or more channel widths which are simply related to r_0. In channels with periodic boundary conditions and for potentials which are discontinuous at r_0, the transverse and longitudinal pressure components exhibit a 1/2 and 3/2 singularity, respectively. Continuous potentials with a power law singularity result in weaker singularities of the pressure components. In channels with reflecting boundary conditions the singularities are found to be weaker than those corresponding to periodic boundaries.

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arXiv2007

Criticality and Condensation in a Non-Conserving Zero Range Process

The Zero-Range Process, in which particles hop between sites on a lattice under conserving dynamics, is a prototypical model for studying real-space condensation. Within this model the system is critical only at the transition point. Here we consider a non-conserving Zero-Range Process which is shown to exhibit generic critical phases which exist in a range of creation and annihilation parameters. The model also exhibits phases characterised by mesocondensates each of which contains a subextensive number of particles. A detailed phase diagram, delineating the various phases, is derived.

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arXiv2006

Dynamical scaling for probe particles in a driven fluid

We investigate two distinct universality classes for probe particles that move stochastically in a one-dimensional driven system. If the random force that drives the probe particles is fully generated by the current fluctuations of the driven fluid, such as when the probe particles are embedded in a ring, they inherit the dynamical exponent of the fluid, which generically is z=3/2. On the other hand, if the random force has a part that is temporally uncorrelated, the resulting motion can be described by a dynamical exponent z=2 as considered in previous work.

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arXiv2006

Contact processes with long-range interactions

A class of non-local contact processes is introduced and studied using mean-field approximation and numerical simulations. In these processes particles are created at a rate which decays algebraically with the distance from the nearest particle. It is found that the transition into the absorbing state is continuous and is characterized by continuously varying critical exponents. This model differs from the previously studied non-local directed percolation model, where particles are created by unrestricted Levy flights. It is motivated by recent studies of non-equilibrium wetting indicating that this type of non-local processes play a role in the unbinding transition. Other non-local processes which have been suggested to exist within the context of wetting are considered as well.

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arXiv2006

Loop Dynamics in DNA Denaturation

The dynamics of a loop in DNA molecules at the denaturation transition is studied by scaling arguments and numerical simulations. The autocorrelation function of the state of complementary bases (either closed or open) is calculated. The long-time decay of the autocorrelation function is expressed in terms of the loop exponent c both for homopolymers and heteropolymers. This suggests an experimental method for measuring the exponent c using florescence correlation spectroscopy.

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arXiv2005

Breaking of ergodicity and long relaxation times in systems with long-range interactions

The thermodynamic and dynamical properties of an Ising model with both short range and long range, mean field like, interactions are studied within the microcanonical ensemble. It is found that the relaxation time of thermodynamically unstable states diverges logarithmically with system size. This is in contrast with the case of short range interactions where this time is finite. Moreover, at sufficiently low energies, gaps in the magnetization interval may develop to which no microscopic configuration corresponds. As a result, in local microcanonical dynamics the system cannot move across the gap, leading to breaking of ergodicity even in finite systems. These are general features of systems with long range interactions and are expected to be valid even when the interaction is slowly decaying with distance.

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arXiv2005

Critical phase in non-conserving zero-range processes and equilibrium networks

Zero-range processes, in which particles hop between sites on a lattice, are closely related to equilibrium networks, in which rewiring of links take place. Both systems exhibit a condensation transition for appropriate choices of the dynamical rules. The transition results in a macroscopically occupied site for zero-range processes and a macroscopically connected node for networks. Criticality, characterized by a scale-free distribution, is obtained only at the transition point. This is in contrast with the widespread scale-free real-life networks. Here we propose a generalization of these models whereby criticality is obtained throughout an entire phase, and the scale-free distribution does not depend on any fine-tuned parameter.

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arXiv2004

Directed Percolation with long-range interactions: modeling non-equilibrium wetting

It is argued that some phase--transitions observed in models of non-equilibrium wetting phenomena are related to contact processes with long-range interactions. This is investigated by introducing a model where the activation rate of a site at the edge of an inactive island of length $\ell$ is $1+a\ell^{-σ}$. Mean--field analysis and numerical simulations indicate that for $σ>1$ the transition is continuous and belongs to the universality class of directed percolation, while for $0<σ<1$, the transition becomes first order. This criterion is then applied to discuss critical properties of various models of non--equilibrium wetting.

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arXiv2004

Condensation and coexistence in a two-species driven model

Condensation transition in two-species driven systems in a ring geometry is studied in the case where current-density relation of a domain of particles exhibits two degenerate maxima. It is found that the two maximal current phases coexist both in the fluctuating domains of the fluid and in the condensate, when it exists. This has a profound effect on the steady state properties of the model. In particular, phase separation becomes more favorable, as compared with the case of a single maximum in the current-density relation. Moreover, a selection mechanism imposes equal currents flowing out of the condensate, resulting in a neutral fluid even when the total number of particles of the two species are not equal. In this case the particle imbalance shows up only in the condensate.

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