arXiv subjects

Dahong Qian

Publications and source records attributed to Dahong Qian.

At least 19 recordsLinked to original sources

arXiv2026

Skeleton-Guided Sparse Anchors for Rotated Instance Segmentation in Cell Microscopy

One of the fundamental challenges in cell microscopy (MS) image analysis is instance segmentation (IS), particularly when segmenting cluster regions where multiple objects of varying sizes and shapes may be connected or even overlapped in arbitrary orientations. Existing IS methods usually fail in handling such scenarios, as they rely on coarse instance representations such as keypoints and horizontal bounding boxes (h-bboxes). In this paper, we propose a novel one-stage framework named A2B-IS to address this challenge and enhance the accuracy of IS in MS images. Our approach represents each instance with a pixel-level mask map and a rotated bounding box (r-bbox). Unlike two-stage methods that use box proposals for segmentations, our method decouples mask and box predictions, enabling simultaneous processing to streamline the model pipeline. Additionally, we introduce a Gaussian skeleton map to aid the IS task in two key ways: (1) It guides anchor placement, reducing computational costs while improving the model's capacity to learn RoI-aware features by filtering out noise from background regions. (2) It ensures accurate isolation of densely packed instances by rectifying erroneous box predictions near instance boundaries. To further enhance the performance, we integrate two modules into the framework: (1) An Atrous Attention Block (A2B) designed to extract high-resolution feature maps with fine-grained multiscale information, and (2) A Semi-Supervised Learning (SSL) strategy that leverages both labeled and unlabeled images for model training. Our method has been thoroughly validated on two large-scale MS datasets, demonstrating its superiority over most state-of-the-art approaches.

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arXiv2026

Trusted Multi-View Deep Learning Classification of Fetal Congenital Heart Disease with Feature-level and Decision-level Fusion

Congenital heart disease (CHD) refers to the abnormal anatomical structure caused by the abnormal development of the heart and great vessels during embryonic development. Traditional diagnostics often fail to achieve high accuracy and efficiency, especially given the complexity of cardiac anatomy. This study presents a specialized multi-view deep learning framework for CHD binary classification using echocardiographic images. A large-scale CHD dataset, including five views, was used to train the model, enabling it to integrate multi-angle image data. The framework utilizes advanced feature extraction and attention mechanisms to improve diagnostic precision and reliability. An uncertainty-based decision-making component is also integrated to handle low-quality images, enhancing diagnostic outcomes. Experimental results show that this method achieves top-tier performance on our dataset and provides a robust tool for early CHD detection, underscoring its potential for clinical use. The dataset and source code will be released upon paper acceptance.

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arXiv2026

ST-ColoNet: Spatio-Temporal Colon Segment Recognition via Hybrid Attention and Edge-Guided Feature Learning

Colo-segment recognition in colonoscopy videos is a key requirement for many downstream tasks, but existing automatic recognition methods only use colonoscopy images without fully exploiting the use of temporal information, leading to poor performance. Additionally, relevant public video-based datasets are in scarcity. To tackle this problem, we curate and release a labeled dataset specifically for the task of colo-segment recognition. In addition, we propose a two-stage deep learning-based framework, Colo-Segment Recognition via SpatioTemporal Network (ST-ColoNet), for the task of colo-segment recognition from colonoscopy videos which includes the Colorlaus module that uses metric learning to optimize edge-mediated spatial feature extraction, as well as the Full-Temp module which combines three self-attention patterns to better approximate full self-attention on long colonoscopy sequences and optimize temporal feature aggregation. Through extensive ablation experiments, we show that our framework is capable of achieving state-of-the-art performance on the task of colo-segment recognition, achieving an accuracy of 81.0% and F1-score of 70.7%, which is a tremendous improvement over state-of-the-art methods.

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arXiv2026

SASG-DA: Sparse-Aware Semantic-Guided Diffusion Augmentation For Myoelectric Gesture Recognition

Surface electromyography (sEMG)-based gesture recognition plays a critical role in human-machine interaction (HMI), particularly for rehabilitation and prosthetic control. However, sEMG-based systems often suffer from the scarcity of informative training data, leading to overfitting and poor generalization in deep learning models. Data augmentation offers a promising approach to increasing the size and diversity of training data, where faithfulness and diversity are two critical factors to effectiveness. However, promoting untargeted diversity can result in redundant samples with limited utility. To address these challenges, we propose a novel diffusion-based data augmentation approach, Sparse-Aware Semantic-Guided Diffusion Augmentation (SASG-DA). To enhance generation faithfulness, we introduce the Semantic Representation Guidance (SRG) mechanism by leveraging fine-grained, task-aware semantic representations as generation conditions. To enable flexible and diverse sample generation, we propose a Gaussian Modeling Semantic Sampling (GMSS) strategy, which models the semantic representation distribution and allows stochastic sampling to produce both faithful and diverse samples. To enhance targeted diversity, we further introduce a Sparse-Aware Semantic Sampling strategy to explicitly explore underrepresented regions, improving distribution coverage and sample utility. Extensive experiments on benchmark sEMG datasets, Ninapro DB2, DB4, and DB7, demonstrate that SASG-DA significantly outperforms existing augmentation methods. Overall, our proposed data augmentation approach effectively mitigates overfitting and improves recognition performance and generalization by offering both faithful and diverse samples.

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arXiv2026

Fusion of Spatio-Temporal and Multi-Scale Frequency Features for Dry Electrodes MI-EEG Decoding

Dry-electrode Motor Imagery Electroencephalography (MI-EEG) enables fast, comfortable, real-world Brain Computer Interface by eliminating gels and shortening setup for at-home and wearable use.However, dry recordings pose three main issues: lower Signal-to-Noise Ratio with more baseline drift and sudden transients; weaker and noisier data with poor phase alignment across trials; and bigger variances between sessions. These drawbacks lead to larger data distribution shift, making features less stable for MI-EEG tasks.To address these problems, we introduce STGMFM, a tri-branch framework tailored for dry-electrode MI-EEG, which models complementary spatio-temporal dependencies via dual graph orders, and captures robust envelope dynamics with a multi-scale frequency mixing branch, motivated by the observation that amplitude envelopes are less sensitive to contact variability than instantaneous waveforms. Physiologically meaningful connectivity priors guide learning, and decision-level fusion consolidates a noise-tolerant consensus. On our collected dry-electrode MI-EEG, STGMFM consistently surpasses competitive CNN/Transformer/graph baselines. Codes are available at https://github.com/Tianyi-325/STGMFM.

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arXiv2025

GPF-Net: Gated Progressive Fusion Learning for Polyp Re-Identification

Colonoscopic Polyp Re-Identification aims to match the same polyp from a large gallery with images from different views taken using different cameras, which plays an important role in the prevention and treatment of colorectal cancer in computer-aided diagnosis. However, the coarse resolution of high-level features of a specific polyp often leads to inferior results for small objects where detailed information is important. To address this challenge, we propose a novel architecture, named Gated Progressive Fusion network, to selectively fuse features from multiple levels using gates in a fully connected way for polyp ReID. On the basis of it, a gated progressive fusion strategy is introduced to achieve layer-wise refinement of semantic information through multi-level feature interactions. Experiments on standard benchmarks show the benefits of the multimodal setting over state-of-the-art unimodal ReID models, especially when combined with the specialized multimodal fusion strategy.

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arXiv2025

LDP: Parameter-Efficient Fine-Tuning of Multimodal LLM for Medical Report Generation

Colonoscopic polyp diagnosis is pivotal for early colorectal cancer detection, yet traditional automated reporting suffers from inconsistencies and hallucinations due to the scarcity of high-quality multimodal medical data. To bridge this gap, we propose LDP, a novel framework leveraging multimodal large language models (MLLMs) for professional polyp diagnosis report generation. Specifically, we curate MMEndo, a multimodal endoscopic dataset comprising expert-annotated colonoscopy image-text pairs. We fine-tune the Qwen2-VL-7B backbone using Parameter-Efficient Fine-Tuning (LoRA) and align it with clinical standards via Direct Preference Optimization (DPO). Extensive experiments show that our LDP outperforms existing baselines on both automated metrics and rigorous clinical expert evaluations (achieving a Physician Score of 7.2/10), significantly reducing training computational costs by 833x compared to full fine-tuning. The proposed solution offers a scalable, clinically viable path for primary healthcare, with additional validation on the IU-XRay dataset confirming its robustness.

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arXiv2025

MICCAI STSR 2025 Challenge: Semi-Supervised Teeth and Pulp Segmentation and CBCT-IOS Registration

Cone-Beam Computed Tomography (CBCT) and Intraoral Scanning (IOS) are essential for digital dentistry, but annotated data scarcity limits automated solutions for pulp canal segmentation and cross-modal registration. To benchmark semi-supervised learning (SSL) in this domain, we organized the STSR 2025 Challenge at MICCAI 2025, featuring two tasks: (1) semi-supervised segmentation of teeth and pulp canals in CBCT, and (2) semi-supervised rigid registration of CBCT and IOS. We provided 60 labeled and 640 unlabeled IOS samples, plus 30 labeled and 250 unlabeled CBCT scans with varying resolutions and fields of view. The challenge attracted strong community participation, with top teams submitting open-source deep learning-based SSL solutions. For segmentation, leading methods used nnU-Net and Mamba-like State Space Models with pseudo-labeling and consistency regularization, achieving a Dice score of 0.967 and Instance Affinity of 0.738 on the hidden test set. For registration, effective approaches combined PointNetLK with differentiable SVD and geometric augmentation to handle modality gaps; hybrid neural-classical refinement enabled accurate alignment despite limited labels. All data and code are publicly available at https://github.com/ricoleehduu/STS-Challenge-2025 to ensure reproducibility.

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arXiv2025

MICCAI STS 2024 Challenge: Semi-Supervised Instance-Level Tooth Segmentation in Panoramic X-ray and CBCT Images

Orthopantomogram (OPGs) and Cone-Beam Computed Tomography (CBCT) are vital for dentistry, but creating large datasets for automated tooth segmentation is hindered by the labor-intensive process of manual instance-level annotation. This research aimed to benchmark and advance semi-supervised learning (SSL) as a solution for this data scarcity problem. We organized the 2nd Semi-supervised Teeth Segmentation (STS 2024) Challenge at MICCAI 2024. We provided a large-scale dataset comprising over 90,000 2D images and 3D axial slices, which includes 2,380 OPG images and 330 CBCT scans, all featuring detailed instance-level FDI annotations on part of the data. The challenge attracted 114 (OPG) and 106 (CBCT) registered teams. To ensure algorithmic excellence and full transparency, we rigorously evaluated the valid, open-source submissions from the top 10 (OPG) and top 5 (CBCT) teams, respectively. All successful submissions were deep learning-based SSL methods. The winning semi-supervised models demonstrated impressive performance gains over a fully-supervised nnU-Net baseline trained only on the labeled data. For the 2D OPG track, the top method improved the Instance Affinity (IA) score by over 44 percentage points. For the 3D CBCT track, the winning approach boosted the Instance Dice score by 61 percentage points. This challenge confirms the substantial benefit of SSL for complex, instance-level medical image segmentation tasks where labeled data is scarce. The most effective approaches consistently leveraged hybrid semi-supervised frameworks that combined knowledge from foundational models like SAM with multi-stage, coarse-to-fine refinement pipelines. Both the challenge dataset and the participants' submitted code have been made publicly available on GitHub (https://github.com/ricoleehduu/STS-Challenge-2024), ensuring transparency and reproducibility.

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arXiv2025

Colo-ReID: Discriminative Representation Embedding with Meta-learning for Colonoscopic Polyp Re-Identification

Colonoscopic Polyp Re-Identification aims to match the same polyp from a large gallery with images from different views taken using different cameras and plays an important role in the prevention and treatment of colorectal cancer. However, traditional methods for object ReID directly adopting CNN models trained on the ImageNet dataset usually produce unsatisfactory retrieval performance on colonoscopic datasets due to the large domain gap. Additionally, these methods neglect to explore the potential of self-discrepancy among intra-class or inter-class relations in the colonoscopic polyp dataset, which remains an open research problem in the medical community. To solve this dilemma, we propose a simple but effective training method named Colo-ReID, which can help our model learn more general and discriminative knowledge based on the meta-learning strategy in scenarios with fewer samples. Based on this, a dynamic Meta-Learning Regulation mechanism called MLR is introduced to further boost the performance of polyp re-identification. Our experimental results show that Colo-ReID consistently outperforms second-best method in terms of mAP performance by +2.3% on polyp re-identification task. Our source code is also publicly available at https://github.com/JeremyXSC/Colo-ReID.

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arXiv2025

Learning Collaborative Knowledge with Multimodal Representation for Polyp Re-Identification

Colonoscopic Polyp Re-Identification aims to match the same polyp from a large gallery with images from different views taken using different cameras, which plays an important role in the prevention and treatment of colorectal cancer in computer-aided diagnosis. However, traditional methods for object ReID directly adopting CNN models trained on the ImageNet dataset usually produce unsatisfactory retrieval performance on colonoscopic datasets due to the large domain gap. Worsely, these solutions typically learn unimodal modal representations on the basis of visual samples, which fails to explore complementary information from other different modalities. To address this challenge, we propose a novel Deep Multimodal Collaborative Learning framework named DMCL for polyp re-identification, which can effectively encourage multimodal knowledge collaboration and reinforce generalization capability in medical scenarios. On the basis of it, a dynamic multimodal feature fusion strategy is introduced to leverage the optimized visual-text representations for multimodal fusion via end-to-end training. Experiments on the standard benchmarks show the benefits of the multimodal setting over state-of-the-art unimodal ReID models, especially when combined with the collaborative multimodal fusion strategy. The code is publicly available at https://github.com/JeremyXSC/DMCL.

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arXiv2025

Robust Real-Time Endoscopic Stereo Matching under Fuzzy Tissue Boundaries

Real-time acquisition of accurate scene depth is essential for automated robotic minimally invasive surgery. Stereo matching with binocular endoscopy can provide this depth information. However, existing stereo matching methods, designed primarily for natural images, often struggle with endoscopic images due to fuzzy tissue boundaries and typically fail to meet real-time requirements for high-resolution endoscopic image inputs. To address these challenges, we propose \textbf{RRESM}, a real-time stereo matching method tailored for endoscopic images. Our approach integrates a 3D Mamba Coordinate Attention module that enhances cost aggregation through position-sensitive attention maps and long-range spatial dependency modeling via the Mamba block, generating a robust cost volume without substantial computational overhead. Additionally, we introduce a High-Frequency Disparity Optimization module that refines disparity predictions near tissue boundaries by amplifying high-frequency details in the wavelet domain. Evaluations on the SCARED and SERV-CT datasets demonstrate state-of-the-art matching accuracy with a real-time inference speed of 42 FPS. The code is available at https://github.com/Sonne-Ding/RRESM.

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arXiv2025

CPKD: Clinical Prior Knowledge-Constrained Diffusion Models for Surgical Phase Recognition in Endoscopic Submucosal Dissection

Gastrointestinal malignancies constitute a leading cause of cancer-related mortality worldwide, with advanced-stage prognosis remaining particularly dismal. Originating as a groundbreaking technique for early gastric cancer treatment, Endoscopic Submucosal Dissection has evolved into a versatile intervention for diverse gastrointestinal lesions. While computer-assisted systems significantly enhance procedural precision and safety in ESD, their clinical adoption faces a critical bottleneck: reliable surgical phase recognition within complex endoscopic workflows. Current state-of-the-art approaches predominantly rely on multi-stage refinement architectures that iteratively optimize temporal predictions. In this paper, we present Clinical Prior Knowledge-Constrained Diffusion (CPKD), a novel generative framework that reimagines phase recognition through denoising diffusion principles while preserving the core iterative refinement philosophy. This architecture progressively reconstructs phase sequences starting from random noise and conditioned on visual-temporal features. To better capture three domain-specific characteristics, including positional priors, boundary ambiguity, and relation dependency, we design a conditional masking strategy. Furthermore, we incorporate clinical prior knowledge into the model training to improve its ability to correct phase logical errors. Comprehensive evaluations on ESD820, Cholec80, and external multi-center demonstrate that our proposed CPKD achieves superior or comparable performance to state-of-the-art approaches, validating the effectiveness of diffusion-based generative paradigms for surgical phase recognition.

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arXiv2025

SPRMamba: Surgical Phase Recognition for Endoscopic Submucosal Dissection with Mamba

Endoscopic Submucosal Dissection (ESD) is a minimally invasive procedure initially developed for early gastric cancer treatment and has expanded to address diverse gastrointestinal lesions. While computer-assisted surgery (CAS) systems enhance ESD precision and safety, their efficacy hinges on accurate real-time surgical phase recognition, a task complicated by ESD's inherent complexity, including heterogeneous lesion characteristics and dynamic tissue interactions. Existing video-based phase recognition algorithms, constrained by inefficient temporal context modeling, exhibit limited performance in capturing fine-grained phase transitions and long-range dependencies. To overcome these limitations, we propose SPRMamba, a novel framework integrating a Mamba-based architecture with a Scaled Residual TranMamba (SRTM) block to synergize long-term temporal modeling and localized detail extraction. SPRMamba further introduces the Hierarchical Sampling Strategy to optimize computational efficiency, enabling real-time processing critical for clinical deployment. Evaluated on the ESD385 dataset and the cholecystectomy benchmark Cholec80, SPRMamba achieves state-of-the-art performance (87.64% accuracy on ESD385, +1.0% over prior methods), demonstrating robust generalizability across surgical workflows. This advancement bridges the gap between computational efficiency and temporal sensitivity, offering a transformative tool for intraoperative guidance and skill assessment in ESD surgery. The code is accessible at https://github.com/Zxnyyyyy/SPRMamba.

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arXiv2024

Towards Open-Set Myoelectric Gesture Recognition via Dual-Perspective Inconsistency Learning

Gesture recognition based on surface electromyography (sEMG) has achieved significant progress in human-machine interaction (HMI), especially in prosthetic control and movement rehabilitation. However, accurately recognizing predefined gestures within a closed set is still inadequate in practice; a robust open-set system needs to effectively reject unknown gestures while correctly classifying known ones, which is rarely explored in the field of myoelectric gesture recognition. To handle this challenge, we first report a significant distinction in prediction inconsistency discovered for unknown classes, which arises from different perspectives and can substantially enhance open-set recognition performance. Based on this insight, we propose a novel dual-perspective inconsistency learning approach, PredIN, to explicitly magnify the prediction inconsistency by enhancing the inconsistency of class feature distribution within different perspectives. Specifically, PredIN maximizes the class feature distribution inconsistency among the dual perspectives to enhance their differences. Meanwhile, it optimizes inter-class separability within an individual perspective to maintain individual performance. Comprehensive experiments on various benchmark datasets demonstrate that the PredIN outperforms state-of-the-art methods by a clear margin. Our proposed method simultaneously achieves accurate closed-set classification for predefined gestures and effective rejection for unknown gestures, exhibiting its efficacy and superiority in open-set gesture recognition based on sEMG.

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arXiv2024

A Spatial-Spectral and Temporal Dual Prototype Network for Motor Imagery Brain-Computer Interface

Motor imagery electroencephalogram (MI-EEG) decoding plays a crucial role in developing motor imagery brain-computer interfaces (MI-BCIs). However, decoding intentions from MI remains challenging due to the inherent complexity of EEG signals relative to the small-sample size. To address this issue, we propose a spatial-spectral and temporal dual prototype network (SST-DPN). First, we design a lightweight attention mechanism to uniformly model the spatial-spectral relationships across multiple EEG electrodes, enabling the extraction of powerful spatial-spectral features. Then, we develop a multi-scale variance pooling module tailored for EEG signals to capture long-term temporal features. This module is parameter-free and computationally efficient, offering clear advantages over the widely used transformer models. Furthermore, we introduce dual prototype learning to optimize the feature space distribution and training process, thereby improving the model's generalization ability on small-sample MI datasets. Our experimental results show that the SST-DPN outperforms state-of-the-art models with superior classification accuracy (84.11% for dataset BCI4-2A, 86.65% for dataset BCI4-2B). Additionally, we use the BCI3-4A dataset with fewer training data to further validate the generalization ability of the proposed SST-DPN. We also achieve superior performance with 82.03% classification accuracy. Benefiting from the lightweight parameters and superior decoding accuracy, our SST-DPN shows great potential for practical MI-BCI applications. The code is publicly available at https://github.com/hancan16/SST-DPN.

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arXiv2024

Generalizing monocular colonoscopy image depth estimation by uncertainty-based global and local fusion network

Objective: Depth estimation is crucial for endoscopic navigation and manipulation, but obtaining ground-truth depth maps in real clinical scenarios, such as the colon, is challenging. This study aims to develop a robust framework that generalizes well to real colonoscopy images, overcoming challenges like non-Lambertian surface reflection and diverse data distributions. Methods: We propose a framework combining a convolutional neural network (CNN) for capturing local features and a Transformer for capturing global information. An uncertainty-based fusion block was designed to enhance generalization by identifying complementary contributions from the CNN and Transformer branches. The network can be trained with simulated datasets and generalize directly to unseen clinical data without any fine-tuning. Results: Our method is validated on multiple datasets and demonstrates an excellent generalization ability across various datasets and anatomical structures. Furthermore, qualitative analysis in real clinical scenarios confirmed the robustness of the proposed method. Conclusion: The integration of local and global features through the CNN-Transformer architecture, along with the uncertainty-based fusion block, improves depth estimation performance and generalization in both simulated and real-world endoscopic environments. Significance: This study offers a novel approach to estimate depth maps for endoscopy images despite the complex conditions in clinic, serving as a foundation for endoscopic automatic navigation and other clinical tasks, such as polyp detection and segmentation.

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arXiv2024

STS MICCAI 2023 Challenge: Grand challenge on 2D and 3D semi-supervised tooth segmentation

Computer-aided design (CAD) tools are increasingly popular in modern dental practice, particularly for treatment planning or comprehensive prognosis evaluation. In particular, the 2D panoramic X-ray image efficiently detects invisible caries, impacted teeth and supernumerary teeth in children, while the 3D dental cone beam computed tomography (CBCT) is widely used in orthodontics and endodontics due to its low radiation dose. However, there is no open-access 2D public dataset for children's teeth and no open 3D dental CBCT dataset, which limits the development of automatic algorithms for segmenting teeth and analyzing diseases. The Semi-supervised Teeth Segmentation (STS) Challenge, a pioneering event in tooth segmentation, was held as a part of the MICCAI 2023 ToothFairy Workshop on the Alibaba Tianchi platform. This challenge aims to investigate effective semi-supervised tooth segmentation algorithms to advance the field of dentistry. In this challenge, we provide two modalities including the 2D panoramic X-ray images and the 3D CBCT tooth volumes. In Task 1, the goal was to segment tooth regions in panoramic X-ray images of both adult and pediatric teeth. Task 2 involved segmenting tooth sections using CBCT volumes. Limited labelled images with mostly unlabelled ones were provided in this challenge prompt using semi-supervised algorithms for training. In the preliminary round, the challenge received registration and result submission by 434 teams, with 64 advancing to the final round. This paper summarizes the diverse methods employed by the top-ranking teams in the STS MICCAI 2023 Challenge.

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