arXiv subjects

Dan Foreman-Mackey

Publications and source records attributed to Dan Foreman-Mackey.

7 recordsLinked to original sources

arXiv2024

nifty-ls: Fast and Accurate Lomb-Scargle Periodograms Using a Non-Uniform FFT

We present nifty-ls, a software package for fast and accurate evaluation of the Lomb-Scargle periodogram. nifty-ls leverages the fact that Lomb-Scargle can be computed using a non-uniform FFT (NUFFT), which we evaluate with the Flatiron Institute NUFFT package (finufft). This approach achieves a many-fold speedup over the Press & Rybicki (1989) method as implemented in Astropy and is simultaneously many orders of magnitude more accurate. nifty-ls also supports fast evaluation on GPUs via CUDA and integrates with the Astropy Lomb-Scargle interface. nifty-ls is publicly available as open-source software.

astro-ph.IM↗

arXiv2024

BlackJAX: Composable Bayesian inference in JAX

BlackJAX is a library implementing sampling and variational inference algorithms commonly used in Bayesian computation. It is designed for ease of use, speed, and modularity by taking a functional approach to the algorithms' implementation. BlackJAX is written in Python, using JAX to compile and run NumpPy-like samplers and variational methods on CPUs, GPUs, and TPUs. The library integrates well with probabilistic programming languages by working directly with the (un-normalized) target log density function. BlackJAX is intended as a collection of low-level, composable implementations of basic statistical 'atoms' that can be combined to perform well-defined Bayesian inference, but also provides high-level routines for ease of use. It is designed for users who need cutting-edge methods, researchers who want to create complex sampling methods, and people who want to learn how these work.

cs.MS↗

arXiv2023

The Future of Astronomical Data Infrastructure: Meeting Report

The astronomical community is grappling with the increasing volume and complexity of data produced by modern telescopes, due to difficulties in reducing, accessing, analyzing, and combining archives of data. To address this challenge, we propose the establishment of a coordinating body, an "entity," with the specific mission of enhancing the interoperability, archiving, distribution, and production of both astronomical data and software. This report is the culmination of a workshop held in February 2023 on the Future of Astronomical Data Infrastructure. Attended by 70 scientists and software professionals from ground-based and space-based missions and archives spanning the entire spectrum of astronomical research, the group deliberated on the prevailing state of software and data infrastructure in astronomy, identified pressing issues, and explored potential solutions. In this report, we describe the ecosystem of astronomical data, its existing flaws, and the many gaps, duplication, inconsistencies, barriers to access, drags on productivity, missed opportunities, and risks to the long-term integrity of essential data sets. We also highlight the successes and failures in a set of deep dives into several different illustrative components of the ecosystem, included as an appendix.

astro-ph.IM↗

arXiv2022

Empirical Dust Attenuation Model Leads to More Realistic UVJ Diagram for TNG100 Galaxies

Dust attenuation varies substantially from galaxy to galaxy and as of yet cannot be reproduced from first principles in theoretical models. In Nagaraj et al. (2022), we developed the first Bayesian population model of dust attenuation as a function of stellar population properties and projected galaxy shape, built on spectral energy distribution (SED) fits of nearly 30,000 galaxies in the 3D-HST grism survey with broadband photometric coverage from the rest-frame UV to IR. In this paper, we apply the model to galaxies from the large-volume cosmological simulation TNG100. We produce a UVJ diagram and compare it with one obtained in previous work by applying approximate radiative transfer to the simulated galaxies. We find that the UVJ diagram based on our empirical model is in better agreement with observations than the previous effort, especially in the number density of dusty star forming galaxies. We also construct the intrinsic dust-free UVJ diagram for TNG and 3D-HST galaxies at z ~ 1, finding qualitative agreement but residual differences at the 10-20% level. These differences can be largely attributed to the finding that TNG galaxies have, on average, 29% younger stellar populations and 0.28 dex higher metallicities than observed galaxies.

astro-ph.GA↗

arXiv2016

A Causal, Data-Driven Approach to Modeling the Kepler Data

Astronomical observations are affected by several kinds of noise, each with its own causal source; there is photon noise, stochastic source variability, and residuals coming from imperfect calibration of the detector or telescope. The precision of NASA Kepler photometry for exoplanet science---the most precise photometric measurements of stars ever made---appears to be limited by unknown or untracked variations in spacecraft pointing and temperature, and unmodeled stellar variability. Here we present the Causal Pixel Model (CPM) for Kepler data, a data-driven model intended to capture variability but preserve transit signals. The CPM works at the pixel level so that it can capture very fine-grained information about the variation of the spacecraft. The CPM predicts each target pixel value from a large number of pixels of other stars sharing the instrument variabilities while not containing any information on possible transits in the target star. In addition, we use the target star's future and past (auto-regression). By appropriately separating, for each data point, the data into training and test sets, we ensure that information about any transit will be perfectly isolated from the model. The method has four hyper-parameters (the number of predictor stars, the auto-regressive window size, and two L2-regularization amplitudes for model components), which we set by cross-validation. We determine a generic set of hyper-parameters that works well for most of the stars and apply the method to a corresponding set of target stars. We find that we can consistently outperform (for the purposes of exoplanet detection) the Kepler Pre-search Data Conditioning (PDC) method for exoplanet discovery.

astro-ph.EP↗

arXiv2013

Maximizing Kepler science return per telemetered pixel: Detailed models of the focal plane in the two-wheel era

Kepler's immense photometric precision to date was maintained through satellite stability and precise pointing. In this white paper, we argue that image modeling--fitting the Kepler-downlinked raw pixel data--can vastly improve the precision of Kepler in pointing-degraded two-wheel mode. We argue that a non-trivial modeling effort may permit continuance of photometry at 10-ppm-level precision. We demonstrate some baby steps towards precise models in both data-driven (flexible) and physics-driven (interpretably parameterized) modes. We demonstrate that the expected drift or jitter in positions in the two-weel era will help with constraining calibration parameters. In particular, we show that we can infer the device flat-field at higher than pixel resolution; that is, we can infer pixel-to-pixel variations in intra-pixel sensitivity. These results are relevant to almost any scientific goal for the repurposed mission; image modeling ought to be a part of any two-wheel repurpose for the satellite. We make other recommendations for Kepler operations, but fundamentally advocate that the project stick with its core mission of finding and characterizing Earth analogs. [abridged]

astro-ph.IM↗

arXiv2013

Maximizing Kepler science return per telemetered pixel: Searching the habitable zones of the brightest stars

In today's mailing, Hogg et al. propose image modeling techniques to maintain 10-ppm-level precision photometry in Kepler data with only two working reaction wheels. While these results are relevant to many scientific goals for the repurposed mission, all modeling efforts so far have used a toy model of the Kepler telescope. Because the two-wheel performance of Kepler remains to be determined, we advocate for the consideration of an alternate strategy for a >1 year program that maximizes the science return from the "low-torque" fields across the ecliptic plane. Assuming we can reach the precision of the original Kepler mission, we expect to detect 800 new planet candidates in the first year of such a mission. Our proposed strategy has benefits for transit timing variation and transit duration variation studies, especially when considered in concert with the future TESS mission. We also expect to help address the first key science goal of Kepler: the frequency of planets in the habitable zone as a function of spectral type.

astro-ph.IM↗