arXiv subjects

Dan Wilkins

Publications and source records attributed to Dan Wilkins.

15 recordsLinked to original sources

arXiv2026

High-statistics simulations of NewAthena WFI background using Geant4

The observation of hot gas structures is one science goal of the Wide Field Imager (WFI) on ESA's NewAthena X-ray observatory. Because the measurement of these faint diffuse sources is limited by background from cosmic ray particle interactions within the instrument, understanding and reducing this background is critical. To this end, we employ a two-pronged approach, performing high-fidelity Geant4 simulations on both detailed, realistic geometry models as well as complementary simple geometry models. The former can reveal subtle sensitivities of background to details of the instrument design. The latter allows for fast iteration, useful in guiding and understanding the larger simulations. We show how we leverage High Performance Computing (HPC) resources to achieve simultaneously high throughput and fast time to result. We discuss our recent results, which are applicable not only to WFI, but also other X-ray missions.

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arXiv2026

Variability of the X-ray obscuring wind in Mrk 335 with XMM-Newton/RGS

Transient X-ray obscuration in Seyfert 1 galaxies likely arises from clumpy accretion-disk winds near the broad-line region (BLR), but the wind structure and short-timescale variability are difficult to measure because high-resolution spectra are often suppressed during deep low states. We analyse a coordinated XMM-Newton/NuSTAR campaign on Mrk 335 in June 2021, with long-term Swift monitoring, capturing the source in an intermediate-flux state with strong RGS absorption features. We model the broadband SED to determine the ionising continuum for self-consistent photoionisation modelling of the RGS spectra. The stacked RGS spectrum requires three photoionised absorbers with log xi ~ 3.69, 2.97, and 1.91, outflowing at |v_out| ~ 5800, 3200, and 2100 km/s, respectively. Their properties are consistent with the three-phase obscurer reported in 2009, indicating that a similar multi-phase obscuring wind can persist over decade timescales. Using five consecutive RGS observations, we track the wind evolution on day timescales and find strong variability in column density and ionisation in all phases, together with smaller but coherent velocity changes. During a flare, the low-ionisation phase shows a significant drop in opacity, while in the subsequent epoch all phases show increased outflow velocities, suggesting a possible connection between continuum variability and changes in the line-of-sight absorber. The high-ionisation phase responds most directly to changes in ionising luminosity, while the lowest-ionisation phase shows at most a delayed response. Order-of-magnitude constraints place the obscurer at BLR scales, ~10^3-10^5 Rg, with kinetic power potentially reaching the percent level of L_bol for plausible assumptions on geometry and clumpiness.

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arXiv2025

Design, development, and commissioning of a flexible test setup for the AXIS prototype detector

The Advanced X-ray Imaging Satellite (AXIS) is one of two candidate mission concepts selected for Phase-A study for the new NASA Astrophysics Probe Explorer (APEX) mission class, with a planned launch in 2032. The X-ray camera for AXIS is under joint development by the X-ray Astronomy and Observational Cosmology (XOC) Group at Stanford, the MIT Kavli Institute (MKI), and MIT Lincoln Laboratory (MIT-LL). To accelerate development efforts and meet the AXIS mission requirements, XOC has developed a twin beamline testing system, capable of providing the necessary performance, flexibility, and robustness. We present design details, simulations, and performance results for the newer of the two beamlines, constructed and optimized to test and characterize the first full-size MIT-LL AXIS prototype detectors, operating with the Stanford-developed Multi-Channel Readout Chip (MCRC) integrated readout electronics system. The XOC X-ray beamline design is forward-looking and flexible, with a modular structure adaptable to a wide range of detector technologies identified by the Great Observatories Maturation Program (GOMAP) that span the X-ray to near-infrared wavelengths.

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arXiv2025

Variable X-ray reverberation in the rapidly accreting AGN Ark 564: the response of the soft excess to the changing geometry of the inner accretion flow

X-ray reverberation, which exploits the time delays between variability in different energy bands as a function of Fourier frequency, probes the structure of the inner accretion disks and X-ray coronae of active galactic nuclei. We present a systematic X-ray spectroscopic and reverberation study of the high-Eddington-ratio narrow-line Seyfert 1 galaxy Ark 564, using over 900 ks of \textit{XMM-Newton} and \textit{NuSTAR} observations spanning 13 years. The time-averaged spectra can be well described by the a model consisting of a coronal continuum, relativistic disk reflection, warm Comptonization, and three warm absorbers. Leveraging the high X-ray brightness of Ark 564, we are able to resolve the time evolution of the spectra and contemporaneous reverberation lags. The soft-band lag relative to the continuum increases with the X-ray flux, while Fe K$\alpha$ lags are detected in only a subset of epochs and do not correlate with soft lags. Models based on a lamppost corona and reflection from a standard thin disk can broadly reproduce the observed lag-energy spectra of low-flux epochs; however, additional reverberation from the warm Comptonized atmosphere is required to explain the soft lags observed in high-flux epochs. A vertically puffed-up inner disk and a variable, vertically extended corona can better explain the observed evolution of the lags and covariance spectra. Our study underscores the importance of multi-epoch, multi-band analyses for a comprehensive understanding the inner accretion disk and corona.

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arXiv2025

Using the XMM-Newton small window mode to investigate systematic uncertainties in the particle background of X-ray charge-coupled device detectors

The level and uncertainty of the particle induced background in CCD detectors plays a crucial role for future X-ray instruments, such as the Wide Field Imager (WFI) onboard Athena. To mitigate the background systematic uncertainties, which will limit the Athena science goals, we aim to understand the relationship between the energetic charged particles interacting in the detector and satellite, and the instrumental science background to an unprecedented level. These particles produce easily identified "cosmic-ray tracks" along with less easily identified signals produced by secondary particles, e.g., X-rays generated by particle interactions with the instrument and indistinguishable from genuine sky X-rays. We utilize the Small Window Mode of the PN camera onboard XMM-Newton to understand the time, spatial and energy dependence of the various background components, particularly the particle induced background. While the distribution of particle events follows expected detector readout patterns, we find a particle track length distribution inconsistent with the simple, isotropic model. We also find that the detector mode-specific readout results in a shifted Cu fluorescent line. We illustrate that on long timescales the variability of the particle background correlates well with the solar cycle. This 20-year lightcurve, can be reproduced by a particle detector onboard Chandra, the HRC anti-coincidence shield. We conclude that the self-anti-coincidence method of removing X-ray-like events near detected particle tracks in the same frame can be optimized with the inclusion of additional information, such as the energy of the X-ray. The results presented here are relevant for any future pixelated X-ray imaging detector, and could allow the WFI to probe to truly faint X-ray surface brightness.

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arXiv2024

Towards efficient machine-learning-based reduction of the cosmic-ray induced background in X-ray imaging detectors: increasing context awareness

Traditional cosmic ray filtering algorithms used in X-ray imaging detectors aboard space telescopes perform event reconstruction based on the properties of activated pixels above a certain energy threshold, within 3x3 or 5x5 pixel sliding windows. This approach can reject up to 98% of the cosmic ray background. However, the remaining unrejected background constitutes a significant impediment to studies of low surface brightness objects, which are especially prevalent in the high-redshift universe. The main limitation of the traditional filtering algorithms is their ignorance of the long-range contextual information present in image frames. This becomes particularly problematic when analyzing signals created by secondary particles produced during interactions of cosmic rays with body of the detector. Such signals may look identical to the energy deposition left by X-ray photons, when one considers only the properties within the small sliding window. Additional information is present, however, in the spatial and energy correlations between signals in different parts of the frame, which can be accessed by modern machine learning (ML) techniques. In this work, we continue the development of an ML-based pipeline for cosmic ray background mitigation. Our latest method consist of two stages: first, a frame classification neural network is used to create class activation maps (CAM), localizing all events within the frame; second, after event reconstruction, a random forest classifier, using features obtained from CAMs, is used to separate X-ray and cosmic ray features. The method delivers >40% relative improvement over traditional filtering in background rejection in standard 0.3-10keV energy range, at the expense of only a small (<2%) level of lost X-ray signal. Our method also provides a convenient way to tune the cosmic ray rejection threshold to adapt to a user's specific scientific needs.

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arXiv2024

Advancing Precision Particle Background Estimation for Future X-ray Missions: Correlated Variability between AMS and Chandra/XMM-Newton

Galactic cosmic ray (GCR) particles have a significant impact on the particle-induced background of X-ray observatories, and their flux exhibits substantial temporal variability, potentially influencing background levels. In this study, we present one-day binned high-energy reject rates derived from the Chandra-ACIS and XMM-Newton EPIC-pn instruments, serving as proxies for GCR particle flux. We systematically analyze the ACIS and EPIC-pn reject rates and compare them with the AMS proton flux. Our analysis initially reveals robust correlations between the AMS proton flux and the ACIS/EPIC-pn reject rates when binned over 27-day intervals. However, a closer examination reveals substantial fluctuations within each 27-day bin, indicating shorter-term variability. Upon daily binning, we observe finer. temporal structures in the datasets, demonstrating the presence of recurrent variations with periods of $\sim$ 25 days and 23 days in ACIS and EPIC-pn reject rates, respectively, spanning the years 2014 to 2018. Notably, during the 2016--2017 period, we additionally detect periodicities of $\sim$13.5 days and 9 days in the ACIS and EPIC-pn reject rates, respectively. Intriguingly, we observe a time lag of $\sim$ 6 days between the AMS proton flux and the ACIS/EPIC-pn reject rates during the second half of 2016. This time lag is not visible before 2016 and aftern2017. The underlying physical mechanisms responsible for this time lag remain a subject of ongoing investigation.

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arXiv2023

X-ray/UVOIR Frequency-resolved Time Lag Analysis of Mrk 335 Reveals Accretion Disk Reprocessing

UV and optical continuum reverberation mapping is powerful for probing the accretion disk and inner broad-line region. However, recent reverberation mapping campaigns in the X-ray, UV, and optical have found lags consistently longer than those expected from the standard disk reprocessing picture. The largest discrepancy to-date was recently reported in Mrk 335, where UV/optical lags are up to 12 times longer than expected. Here, we perform a frequency-resolved time lag analysis of Mrk 335, using Gaussian processes to account for irregular sampling. For the first time, we compare the Fourier frequency-resolved lags directly to those computed using the popular Interpolated Cross-Correlation Function (ICCF) method applied to both the original and detrended light curves. We show that the anticipated disk reverberation lags are recovered by the Fourier lags when zeroing in on the short-timescale variability. This suggests that a separate variability component is present on long timescales. If this separate component is modeled as reverberation from another region beyond the accretion disk, we constrain a size-scale of roughly 15 light-days from the central black hole. This is consistent with the size of the broad line region inferred from H$\beta$ reverberation lags. We also find tentative evidence for a soft X-ray lag, which we propose may be due to light travel time delays between the hard X-ray corona and distant photoionized gas that dominates the soft X-ray spectrum below 2 keV.

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arXiv2023

UV/Optical disk reverberation lags despite a faint X-ray corona in the AGN Mrk 335

We present the first results from a 100-day Swift, NICER and ground-based X-ray/UV/optical reverberation mapping campaign of the Narrow-Line Seyfert 1 Mrk 335, when it was in an unprecedented low X-ray flux state. Despite dramatic suppression of the X-ray variability, we still observe UV/optical lags as expected from disk reverberation. Moreover, the UV/optical lags are consistent with archival observations when the X-ray luminosity was >10 times higher. Interestingly, both low- and high-flux states reveal UV/optical lags that are 6-11 times longer than expected from a thin disk. These long lags are often interpreted as due to contamination from the broad line region, however the u band excess lag (containing the Balmer jump from the diffuse continuum) is less prevalent than in other AGN. The Swift campaign showed a low X-ray-to-optical correlation (similar to previous campaigns), but NICER and ground-based monitoring continued for another two weeks, during which the optical rose to the highest level of the campaign, followed ~10 days later by a sharp rise in X-rays. While the low X-ray countrate and relatively large systematic uncertainties in the NICER background make this measurement challenging, if the optical does lead X-rays in this flare, this indicates a departure from the zeroth-order reprocessing picture. If the optical flare is due to an increase in mass accretion rate, this occurs on much shorter than the viscous timescale. Alternatively, the optical could be responding to an intrinsic rise in X-rays that is initially hidden from our line-of-sight.

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arXiv2022

The multi-epoch X-ray tale of I Zwicky 1 outflows

The narrow-line Seyfert 1 galaxy I Zwicky 1 shows a unique and complex system of ionised gas in outflow, which consists of an ultra-fast wind and a two-component warm absorber. In the last two decades, XMM-Newton monitored the source multiple times enabling the study of the long-term variability of the various outflows. Plasma in photoionisation equilibrium with the ionising source responds and varies accordingly to any change of the ionising luminosity. However, detailed modelling of the past RGS data has shown no correlation between the plasma ionisation state and the ionising continuum, revealing a complex long-term variability of the multi-phase warm absorber. Here, we present a new observation of I Zwicky 1 by XMM-Newton taken in early 2020 characterised by a lower X-ray flux state. The soft X-ray spectrum from the RGS reveals the two components of the warm absorber with $\log ξ\sim -1.0$ and $\log ξ\sim 1.7$. Comparing our results with the previous observations, the ionisation state of the two absorbing gas components is continuously changing, following the same unpredictable behaviour. The new results strengthen the scenario in which the ionisation state of the warm absorber is driven by the density of the gas rather than the ionising luminosity. In particular, the presence of a radiation driven, inhomogeneous clumpy outflow may explain both the variability in ionisation throughout the years and the line-locked N V system observed in the UV band. Finally, the EPIC-pn spectrum reveals an ultra-fast wind with an outflow velocity of $\sim 0.26c$ and ionisation parameter of $\log ξ\sim 3.8$.

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arXiv2022

Mitigating the effects of particle background on the Athena Wide-Field Imager

The Wide Field Imager (WFI) flying on Athena will usher in the next era of studying the hot and energetic Universe. WFI observations of faint, diffuse sources will be limited by uncertainty in the background produced by high-energy particles. These particles produce easily identified "cosmic-ray tracks" along with signals from secondary photons and electrons generated by particle interactions with the instrument. The signal from these secondaries is identical to the X-rays focused by the optics, and cannot be filtered without also eliminating these precious photons. As part of a larger effort to understand the WFI background, we here present results from a study of background-reduction techniques that exploit the spatial correlation between cosmic-ray particle tracks and secondary events. We use Geant4 simulations to generate a realistic particle background, sort this into simulated WFI frames, and process those frames in a similar way to the expected flight and ground software to produce a WFI observation containing only particle background. The technique under study, Self Anti-Coincidence or SAC, then selectively filters regions of the detector around particle tracks, turning the WFI into its own anti-coincidence detector. We show that SAC is effective at improving the systematic uncertainty for observations of faint, diffuse sources, but at the cost of statistical uncertainty due to a reduction in signal. If sufficient pixel pulse-height information is telemetered to the ground for each frame, then this technique can be applied selectively based on the science goals, providing flexibility without affecting the data quality for other science. The results presented here are relevant for any future silicon-based pixelated X-ray imaging detector, and could allow the WFI and similar instruments to probe to truly faint X-ray surface brightness.

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arXiv2021

First results on SiSeRO (Single electron Sensitive Read Out) devices -- a new X-ray detector for scientific instrumentation

We present an evaluation of a novel on-chip charge detector, called the Single electron Sensitive Read Out (SiSeRO), for charge-coupled device (CCD) image sensor applications. It uses a p-MOSFET transistor at the output stage with a depleted internal gate beneath the p-MOSFET. Charge transferred to the internal gate modulates the source-drain current of the transistor. We have developed a drain current readout module to characterize the detector. The prototype sensor achieves a charge/current conversion gain of 700 pA per electron, an equivalent noise charge (ENC) of 15 electrons (e-) root mean square (RMS), and a full width half maximum (FWHM) of 230 eV at 5.9 keV. In this paper, we discuss the SiSeRO working principle, the readout module developed at Stanford, and the first characterization test results of the SiSeRO prototypes. While at present only a proof-of-concept experiment, in the near future we plan to use next generation sensors with improved noise performance and an enhanced readout module. In particular, we are developing a readout module enabling Repetitive Non-Destructive Readout (RNDR) of the charge, which can in principle yield sub-electron ENC performance. With these developments, we eventually plan to build a matrix of SiSeRO amplifiers to develop an active pixel sensor with an on-chip ASIC-based readout system. Such a system, with fast readout speeds and sub-electron noise, could be effectively utilized in scientific applications requiring fast and low-noise spectro-imagers.

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arXiv2020

Characterisation of the Particle-Induced Background of XMM-Newton EPIC-pn: Short and Long Term Variability

The particle-induced background of X-ray observatories is produced by Galactic Cosmic Ray (GCR) primary protons, electrons, and He ions. Events due to direct interaction with the detector are usually removed by on board processing. The interactions of these primary particles with the detector environment produce secondary particles that mimic X-ray events from celestial sources and are much more difficult to identify. The filter wheel closed data from the XMM-Newton EPIC-pn camera in small window mode (SWM) contains both the X-ray-like background events and the events due to direct interactions with the primary particles. From this data we demonstrate that X-ray-like background events are spatially correlated with the primary particle interaction. This result can be used to further characterise and reduce the non-X-ray background in silicon-based X-ray detectors in current and future missions. We also show that spectrum and pattern fractions of secondary particle events are different from those produced by cosmic X-rays.

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arXiv2019

The XMM-Newton/HST view of the obscuring outflow in the Seyfert Galaxy Mrk 335 observed at extremely low X-ray flux

The Seyfert Galaxy Mrk 335 is known for its frequent changes of flux and spectral shape in the X-ray band occurred during recent years. These variations may be explained by the onset of a wind that previous, non-contemporaneous high-resolution spectroscopy in X-ray and UV bands located at accretion disc scale. A simultaneous new campaign by XMM-Newton and HST caught the source at an historical low flux in the X-ray band. The soft X-ray spectrum is dominated by prominent emission features, and by the effect of a strong ionized absorber with an outflow velocity of 5-6X10$^3$~km~s$^{-1}$. The broadband spectrum obtained by the EPIC-pn camera reveals the presence of an additional layer of absorption by gas at moderate ionization covering 80% of the central source, and tantalizing evidence for absorption in the Fe~K band outflowing at the same velocity of the soft X-ray absorber. The HST-COS spectra confirm the simultaneous presence of broad absorption troughs in CIV, Ly alpha, Ly beta and OVI, with velocities of the order of 5000 km~s$^{-1}$ and covering factors in the range of 20-30%. Comparison of the ionic column densities and of other outflow parameters in the two bands show that the X-ray and UV absorbers are likely originated by the same gas. The resulting picture from this latest multi-wavelength campaign confirms that Mrk 335 undergoes the effect of a patchy, medium-velocity outflowing gas in a wide range of ionization states that seem to be persistently obscuring the nuclear continuum.

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arXiv2018

The Athena WFI Science Products Module

The Science Products Module (SPM), a US contribution to the Athena Wide Field Imager, is a highly capable secondary CPU that performs special processing on the science data stream. The SPM will have access to both accepted X-ray events and those that were rejected by the on-board event recognition processing. It will include two software modules. The Transient Analysis Module will perform on-board processing of the science images to identify and characterize variability of the prime target and/or detection of serendipitous transient X-ray sources in the field of view. The Background Analysis Module will perform more sophisticated flagging of potential background events as well as improved background characterization, making use of data that are not telemetered to the ground, to provide improved background maps and spectra. We present the preliminary design of the SPM hardware as well as a brief overview of the software algorithms under development.

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