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Daniel M. Jones

Publications and source records attributed to Daniel M. Jones.

4 recordsLinked to original sources

IRPAPERS: A Visual Document Benchmark for Scientific Retrieval and Question Answering

AI systems have achieved remarkable success in processing text and relational data, yet visual document processing remains relatively underexplored. Whereas traditional systems require OCR transcriptions to convert these visual documents into text and metadata, recent advances in multimodal foundation models offer retrieval and generation directly from document images. This raises a key question: How do image-based systems compare to established text-based methods? We introduce IRPAPERS, a benchmark of 3,230 pages from 166 scientific papers, with both an image and an OCR transcription for each page. Using 180 needle-in-the-haystack questions, we compare image- and text-based retrieval and question answering systems. Text retrieval using Arctic 2.0 embeddings, BM25, and hybrid text search achieved 46% Recall@1, 78% Recall@5, and 91% Recall@20, while image-based retrieval reaches 43%, 78%, and 93%, respectively. The two modalities exhibit complementary failures, enabling multimodal hybrid search to outperform either alone, achieving 49% Recall@1, 81% Recall@5, and 95% Recall@20. We further evaluate efficiency-performance tradeoffs with MUVERA and assess multiple multi-vector image embedding models. Among closed-source models, Cohere Embed v4 page image embeddings outperform Voyage 3 Large text embeddings and all tested open-source models, achieving 58% Recall@1, 87% Recall@5, and 97% Recall@20. For question answering, text-based RAG systems achieved higher ground-truth alignment than image-based systems (0.82 vs. 0.71), and both benefit substantially from increased retrieval depth, with multi-document retrieval outperforming oracle single-document retrieval. We analyze the complementary limitations of unimodal text and image representations and identify question types that require one modality over the other. The IRPAPERS dataset and all experimental code are publicly available.

cs.IR

Intercombination line frequencies in $^{171}$Yb validated with the clock transition

We have carried absolute frequency measurements of the $(6s^{2})\,^{1}S_{0}$ $-$ $(6s6p)\,^{3}P_{1}$ transition in $^{171}$Yb (the intercombination line), where the spin-1/2 isotope yields two hyperfine lines. The measurements rely on sub-Doppler spectroscopy to yield a discriminator to which a 556 nm laser is locked. The frequency reference for the optical frequency measurements is a high-quality quartz oscillator steered to the GNSS timescale that is bridged with a frequency comb. The reference is validated to $\sim3\times10^{-12}$ by spectroscopy on the $^{1}S_{0}-\,^{3}P_{0}$ (clock) line in laser cooled and trapped $^{171}$Yb atoms. From the hyperfine separation between the $F=1/2$ and $F=3/2$ levels of $^{3}P_{1}$ we determine the hyperfine constant to be $A(^3P_1)= 3\,957\,833\,(28)$ kHz.

physics.atom-ph

Gaussian Mixture Models for Blended Photometric Redshifts

Future cosmological galaxy surveys such as the Large Synoptic Survey Telescope (LSST) will photometrically observe very large numbers of galaxies. Without spectroscopy, the redshifts required for the analysis of these data will need to be inferred using photometric redshift techniques that are scalable to large sample sizes. The high number density of sources will also mean that around half are blended. We present a Bayesian photometric redshift method for blended sources that uses Gaussian mixture models to learn the joint flux-redshift distribution from a set of unblended training galaxies, and Bayesian model comparison to infer the number of galaxies comprising a blended source. The use of Gaussian mixture models renders both of these applications computationally efficient and therefore suitable for upcoming galaxy surveys.

astro-ph.CO

Bayesian photometric redshifts of blended sources

Photometric redshifts are necessary for enabling large-scale multicolour galaxy surveys to interpret their data and constrain cosmological parameters. While the increased depth of future surveys such as the Large Synoptic Survey Telescope (LSST) will produce higher precision constraints, it will also increase the fraction of sources that are blended. In this paper, we present a Bayesian photometric redshift method for blended sources with an arbitrary number of intrinsic components. This method generalises existing template-based Bayesian photometric redshift (BPZ) methods, and produces joint posterior distributions for the component redshifts that allow uncertainties to be propagated in a principled way. Using Bayesian model comparison, we infer the probability that a source is blended and the number of components that it contains. We extend our formalism to the case where sources are blended in some bands and resolved in others. Applying this to the combination of LSST- and Euclid-like surveys, we find that the addition of resolved photometry results in a significant improvement in the reduction of outliers over the fully-blended case. We make available blendz, a Python implementation of our method.

astro-ph.CO